Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS08155

Experiment: D-Trehalose 5 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Trehalose 5 mM (C)
1,821,633	+				+1.2
1,821,706	-		PFLU_RS08155	0.15	+0.2
1,821,716	-		PFLU_RS08155	0.16	-0.8
1,821,764	+		PFLU_RS08155	0.20	+1.2
1,821,767	+		PFLU_RS08155	0.20	+1.2
1,821,770	+		PFLU_RS08155	0.21	+1.2
1,821,770	+		PFLU_RS08155	0.21	+1.2
1,821,770	+		PFLU_RS08155	0.21	+1.2
1,821,771	-		PFLU_RS08155	0.21	+0.2
1,821,835	-		PFLU_RS08155	0.26	+1.2
1,821,840	+		PFLU_RS08155	0.27	+1.2
1,821,840	+		PFLU_RS08155	0.27	+0.2
1,821,841	-		PFLU_RS08155	0.27	+1.2
1,821,841	-		PFLU_RS08155	0.27	+1.2
1,821,977	-		PFLU_RS08155	0.39	+1.2
1,822,002	-		PFLU_RS08155	0.41	+0.2
1,822,124	+		PFLU_RS08155	0.52	+1.2
1,822,284	-		PFLU_RS08155	0.66	+1.2
1,822,342	-		PFLU_RS08155	0.71	+1.2
1,822,342	-		PFLU_RS08155	0.71	+2.2
1,822,344	+		PFLU_RS08155	0.71	+1.2
1,822,571	+				+1.2
1,822,667	-				+1.6
1,822,800	+		PFLU_RS30510	0.10	-1.6
1,822,933	-		PFLU_RS30510	0.21	+0.2
1,822,994	-		PFLU_RS30510	0.26	-0.1
1,823,060	-		PFLU_RS30510	0.32	-1.6
1,823,169	+		PFLU_RS30510	0.41	+0.8
1,823,169	+		PFLU_RS30510	0.41	-0.4
1,823,169	+		PFLU_RS30510	0.41	-1.1
1,823,169	+		PFLU_RS30510	0.41	+0.9
1,823,170	-		PFLU_RS30510	0.41	+0.2
1,823,170	-		PFLU_RS30510	0.41	-0.9
1,823,198	-		PFLU_RS30510	0.43	-1.2
1,823,265	-		PFLU_RS30510	0.49	-0.8
1,823,303	+		PFLU_RS30510	0.52	-1.4
1,823,345	-		PFLU_RS30510	0.55	+1.2
1,823,380	+		PFLU_RS30510	0.58	-1.0
1,823,381	-		PFLU_RS30510	0.58	-1.1
1,823,634	+		PFLU_RS30510	0.79	+1.2
1,823,635	-		PFLU_RS30510	0.79	+1.2
1,823,637	-		PFLU_RS30510	0.79	+1.6