Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS07790

Experiment: D-Trehalose 5 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Trehalose 5 mM (C)
1,732,816	+				-0.1
1,732,816	+				-1.0
1,732,816	+				+1.0
1,732,816	+				-0.9
1,732,816	+				-0.1
1,732,816	+				-0.7
1,732,817	-				+0.5
1,732,817	-				-0.8
1,732,817	-				+0.7
1,732,817	-				-1.2
1,732,817	-				-0.6
1,732,817	-				-1.6
1,732,817	-				+0.2
1,732,818	+				-0.2
1,732,818	+				-0.8
1,732,818	+				-0.5
1,732,818	+				+1.0
1,732,818	+				+0.4
1,732,818	+				+1.0
1,732,818	+				-0.4
1,732,818	+				-1.5
1,732,818	+				+0.2
1,732,818	+				-0.1
1,732,818	+				-0.2
1,732,818	+				+0.2
1,732,818	+				+1.5
1,732,818	+				+0.7
1,732,818	+				+1.0
1,732,818	+				-0.8
1,732,818	+				-0.1
1,732,818	+				+0.6
1,732,818	+				-2.8
1,732,818	+				-0.5
1,732,818	+				-1.6
1,732,818	+				-0.2
1,732,818	+				-0.3
1,732,818	+				-0.5
1,732,818	+				+2.8
1,732,818	+				-1.9
1,732,819	-				+0.3
1,732,819	-				+1.2
1,732,819	-				-0.3
1,732,819	-				+1.2
1,732,819	-				+2.0
1,732,819	-				+1.4
1,732,819	-				+1.0
1,732,819	-				+1.2
1,732,819	-				-0.4
1,732,819	-				+0.2
1,732,819	-				-0.2
1,732,819	-				+0.6
1,732,819	-				+0.3
1,732,819	-				-0.3
1,732,819	-				-2.2
1,732,819	-				+0.7
1,732,819	-				-0.4
1,732,819	-				-0.8
1,732,819	-				+0.8
1,732,819	-				+0.2
1,732,819	-				+1.2
1,732,819	-				+0.5
1,732,819	-				+1.8
1,732,819	-				-0.3
1,732,819	-				+0.7
1,732,830	+				+0.2
1,732,831	-				+0.7
1,732,831	-				+0.7
1,732,831	-				-1.1
1,732,841	+				-1.2
1,732,842	-				-1.0
1,732,876	+				+0.1
1,732,876	+				+1.2
1,732,876	+				-0.3
1,732,877	-				+0.7
1,732,892	+				+1.4
1,732,893	-				+2.8
1,732,893	-				+1.2
1,732,923	+				+0.2
1,732,923	+				-1.9
1,732,923	+				+0.8
1,732,924	-				+1.8
1,732,924	-				+0.8
1,732,924	-				-0.8
1,732,924	-				+0.7
1,733,017	+		PFLU_RS07785	0.20	-0.6
1,733,017	+		PFLU_RS07785	0.20	-1.9
1,733,017	+		PFLU_RS07785	0.20	-1.6
1,733,017	+		PFLU_RS07785	0.20	+1.2
1,733,018	-		PFLU_RS07785	0.20	-0.3
1,733,018	-		PFLU_RS07785	0.20	-1.3
1,733,018	-		PFLU_RS07785	0.20	+2.2
1,733,018	-		PFLU_RS07785	0.20	-0.6
1,733,021	+		PFLU_RS07785	0.21	+2.8
1,733,021	+		PFLU_RS07785	0.21	+0.2
1,733,021	+		PFLU_RS07785	0.21	-1.1
1,733,021	+		PFLU_RS07785	0.21	-2.1
1,733,021	+		PFLU_RS07785	0.21	+0.4
1,733,021	+		PFLU_RS07785	0.21	-0.1
1,733,021	+		PFLU_RS07785	0.21	-0.8
1,733,022	-		PFLU_RS07785	0.21	+0.2
1,733,022	-		PFLU_RS07785	0.21	+1.2
1,733,022	-		PFLU_RS07785	0.21	+0.2
1,733,022	-		PFLU_RS07785	0.21	-2.2
1,733,022	-		PFLU_RS07785	0.21	+1.0
1,733,022	-		PFLU_RS07785	0.21	+0.7
1,733,022	-		PFLU_RS07785	0.21	-0.3
1,733,022	-		PFLU_RS07785	0.21	-0.3
1,733,022	-		PFLU_RS07785	0.21	+2.2
1,733,022	-		PFLU_RS07785	0.21	-0.1
1,733,048	+		PFLU_RS07785	0.25	+0.4
1,733,048	+		PFLU_RS07785	0.25	+0.8
1,733,048	+		PFLU_RS07785	0.25	+0.2
1,733,048	+		PFLU_RS07785	0.25	-0.8
1,733,048	+		PFLU_RS07785	0.25	+1.2
1,733,049	-		PFLU_RS07785	0.25	+0.2
1,733,049	-		PFLU_RS07785	0.25	+0.6
1,733,049	-		PFLU_RS07785	0.25	+0.2
1,733,049	-		PFLU_RS07785	0.25	-0.1
1,733,049	-		PFLU_RS07785	0.25	-0.1
1,733,303	+		PFLU_RS07785	0.62	+1.2
1,733,303	+		PFLU_RS07785	0.62	+0.7
1,733,303	+		PFLU_RS07785	0.62	+1.7
1,733,303	+		PFLU_RS07785	0.62	+0.0
1,733,303	+		PFLU_RS07785	0.62	+0.7
1,733,303	+		PFLU_RS07785	0.62	-0.3
1,733,303	+		PFLU_RS07785	0.62	-1.3
1,733,304	-		PFLU_RS07785	0.62	-1.0
1,733,304	-		PFLU_RS07785	0.62	+1.8
1,733,304	-		PFLU_RS07785	0.62	-1.1
1,733,304	-		PFLU_RS07785	0.62	+2.2
1,733,304	-		PFLU_RS07785	0.62	+1.2
1,733,304	-		PFLU_RS07785	0.62	-0.3
1,733,304	-		PFLU_RS07785	0.62	-0.8
1,733,357	+		PFLU_RS07785	0.70	+1.2
1,733,358	-		PFLU_RS07785	0.70	-0.8
1,733,358	-		PFLU_RS07785	0.70	-0.0
1,733,358	-		PFLU_RS07785	0.70	+0.2
1,733,358	-		PFLU_RS07785	0.70	-0.3
1,733,369	+		PFLU_RS07785	0.71	-0.2
1,733,369	+		PFLU_RS07785	0.71	-1.1
1,733,369	+		PFLU_RS07785	0.71	+0.2
1,733,369	+		PFLU_RS07785	0.71	+0.7
1,733,369	+		PFLU_RS07785	0.71	+1.2
1,733,369	+		PFLU_RS07785	0.71	-0.8
1,733,369	+		PFLU_RS07785	0.71	+0.8
1,733,369	+		PFLU_RS07785	0.71	+1.2
1,733,369	+		PFLU_RS07785	0.71	-1.6
1,733,369	+		PFLU_RS07785	0.71	+0.8
1,733,370	-		PFLU_RS07785	0.71	+0.6
1,733,370	-		PFLU_RS07785	0.71	+1.2
1,733,370	-		PFLU_RS07785	0.71	-0.3
1,733,370	-		PFLU_RS07785	0.71	+0.2
1,733,370	-		PFLU_RS07785	0.71	-1.1
1,733,370	-		PFLU_RS07785	0.71	+0.2
1,733,370	-		PFLU_RS07785	0.71	+0.8
1,733,370	-		PFLU_RS07785	0.71	+0.5
1,733,370	-		PFLU_RS07785	0.71	-1.3
1,733,370	-		PFLU_RS07785	0.71	-1.1
1,733,370	-		PFLU_RS07785	0.71	+0.6
1,733,370	-		PFLU_RS07785	0.71	+0.5
1,733,370	-		PFLU_RS07785	0.71	-0.3
1,733,387	+		PFLU_RS07785	0.74	-1.1
1,733,387	+		PFLU_RS07785	0.74	+1.2
1,733,387	+		PFLU_RS07785	0.74	+0.5
1,733,387	+		PFLU_RS07785	0.74	+0.2
1,733,387	+		PFLU_RS07785	0.74	+0.2
1,733,387	+		PFLU_RS07785	0.74	-0.3
1,733,388	-		PFLU_RS07785	0.74	-0.3
1,733,388	-		PFLU_RS07785	0.74	+1.2
1,733,388	-		PFLU_RS07785	0.74	-0.2
1,733,389	+		PFLU_RS07785	0.74	+0.7
1,733,389	+		PFLU_RS07785	0.74	-1.1
1,733,389	+		PFLU_RS07785	0.74	-0.2
1,733,389	+		PFLU_RS07785	0.74	-1.1
1,733,389	+		PFLU_RS07785	0.74	+1.2
1,733,389	+		PFLU_RS07785	0.74	-1.3
1,733,389	+		PFLU_RS07785	0.74	-0.3
1,733,389	+		PFLU_RS07785	0.74	+0.8
1,733,389	+		PFLU_RS07785	0.74	-0.9
1,733,389	+		PFLU_RS07785	0.74	-0.6
1,733,389	+		PFLU_RS07785	0.74	-0.1
1,733,390	-		PFLU_RS07785	0.74	-0.0
1,733,390	-		PFLU_RS07785	0.74	+1.2
1,733,390	-		PFLU_RS07785	0.74	+1.5
1,733,390	-		PFLU_RS07785	0.74	-1.8
1,733,390	-		PFLU_RS07785	0.74	-0.5
1,733,390	-		PFLU_RS07785	0.74	-1.1
1,733,390	-		PFLU_RS07785	0.74	-0.3
1,733,485	+		PFLU_RS07785	0.88	+0.2
1,733,485	+		PFLU_RS07785	0.88	-1.7
1,733,486	-		PFLU_RS07785	0.88	-0.8
1,733,486	-		PFLU_RS07785	0.88	-0.6
1,733,486	-		PFLU_RS07785	0.88	-1.1
1,733,486	-		PFLU_RS07785	0.88	-0.3
1,733,486	-		PFLU_RS07785	0.88	-0.1
1,733,489	+		PFLU_RS07785	0.89	-0.2
1,733,489	+		PFLU_RS07785	0.89	+0.7
1,733,489	+		PFLU_RS07785	0.89	+2.2
1,733,489	+		PFLU_RS07785	0.89	-1.1
1,733,489	+		PFLU_RS07785	0.89	+2.6
1,733,489	+		PFLU_RS07785	0.89	-1.3
1,733,489	+		PFLU_RS07785	0.89	+0.9
1,733,489	+		PFLU_RS07785	0.89	+1.5
1,733,489	+		PFLU_RS07785	0.89	-0.3
1,733,489	+		PFLU_RS07785	0.89	+1.2
1,733,489	+		PFLU_RS07785	0.89	+1.2
1,733,489	+		PFLU_RS07785	0.89	+1.2
1,733,489	+		PFLU_RS07785	0.89	-0.3
1,733,489	+		PFLU_RS07785	0.89	-0.8
1,733,489	+		PFLU_RS07785	0.89	-0.3
1,733,490	-		PFLU_RS07785	0.89	+0.2
1,733,490	-		PFLU_RS07785	0.89	+2.6
1,733,490	-		PFLU_RS07785	0.89	-0.6
1,733,490	-		PFLU_RS07785	0.89	-0.8
1,733,490	-		PFLU_RS07785	0.89	-0.3
1,733,490	-		PFLU_RS07785	0.89	+1.2
1,733,490	-		PFLU_RS07785	0.89	-1.8
1,733,490	-		PFLU_RS07785	0.89	+2.5
1,733,490	-		PFLU_RS07785	0.89	+1.0
1,733,490	-		PFLU_RS07785	0.89	+0.7
1,733,490	-		PFLU_RS07785	0.89	-0.2
1,733,490	-		PFLU_RS07785	0.89	+0.2
1,733,510	+				-1.6
1,733,510	+				+0.2
1,733,511	-				-1.3
1,733,511	-				-0.8
1,733,511	-				+1.7
1,733,564	+				-1.3
1,733,564	+				+1.4
1,733,622	-				+1.1
1,733,622	-				+1.1
1,733,622	-				+0.4
1,733,622	-				+2.2
1,733,637	-				-0.1
1,733,637	-				+0.7
1,733,637	-				+1.2
1,733,637	-				+0.9
1,733,751	+				-1.3
1,733,751	+				+0.6
1,733,751	+				-0.1
1,733,751	+				-1.0
1,733,751	+				-0.3
1,733,751	+				-0.3
1,733,751	+				+0.3
1,733,751	+				-0.2
1,733,751	+				-0.8
1,733,772	+				-0.1
1,733,772	+				-1.5
1,733,773	-				-1.1
1,733,826	+				+0.4
1,733,826	+				-0.3
1,733,827	-				-0.7
1,733,827	-				-0.2
1,733,866	+		PFLU_RS07790	0.20	-0.3
1,733,866	+		PFLU_RS07790	0.20	-1.2
1,733,867	-		PFLU_RS07790	0.21	+0.7
1,733,867	-		PFLU_RS07790	0.21	-0.0
1,733,867	-		PFLU_RS07790	0.21	-0.3
1,733,923	+		PFLU_RS07790	0.39	-1.3
1,733,923	+		PFLU_RS07790	0.39	+1.6
1,733,923	+		PFLU_RS07790	0.39	+0.8
1,733,923	+		PFLU_RS07790	0.39	+1.7
1,733,924	-		PFLU_RS07790	0.40	+0.2
1,733,924	-		PFLU_RS07790	0.40	+1.1
1,733,924	-		PFLU_RS07790	0.40	-0.6
1,733,998	+		PFLU_RS07790	0.65	-0.3
1,733,999	-		PFLU_RS07790	0.65	+0.9
1,734,080	+				-0.8
1,734,081	-				-0.1
1,734,081	-				-0.3
1,734,102	+				-0.4
1,734,102	+				-0.8
1,734,102	+				+0.5
1,734,102	+				-0.5
1,734,102	+				+0.8
1,734,102	+				+0.4
1,734,102	+				-0.3
1,734,103	-				-0.1
1,734,103	-				+1.1
1,734,103	-				-0.1
1,734,103	-				-1.8
1,734,103	-				+1.2
1,734,103	-				+2.0
1,734,115	+				-2.5
1,734,115	+				+2.4
1,734,115	+				-0.5
1,734,116	-				-1.1
1,734,116	-				+0.6
1,734,116	-				-0.9
1,734,116	-				+0.1
1,734,143	+				+0.1
1,734,143	+				+0.2
1,734,143	+				-1.0
1,734,143	+				+2.2
1,734,143	+				-0.8
1,734,143	+				+1.8
1,734,143	+				-0.9
1,734,143	+				+1.2
1,734,144	-				-0.3
1,734,144	-				+0.1
1,734,144	-				+0.6
1,734,144	-				-0.1
1,734,144	-				-0.4
1,734,144	-				-1.0
1,734,144	-				+0.8
1,734,144	-				+1.4
1,734,145	+				-0.4
1,734,145	+				+0.2
1,734,145	+				+0.2
1,734,145	+				+0.3
1,734,146	-				-1.0
1,734,146	-				+0.7
1,734,146	-				-0.6
1,734,146	-				+1.2
1,734,146	-				+0.2
1,734,167	+		PFLU_RS30475	0.13	+0.8
1,734,167	+		PFLU_RS30475	0.13	-0.6
1,734,167	+		PFLU_RS30475	0.13	+0.1
1,734,167	+		PFLU_RS30475	0.13	-0.8
1,734,167	+		PFLU_RS30475	0.13	+0.9
1,734,167	+		PFLU_RS30475	0.13	+0.7
1,734,168	-		PFLU_RS30475	0.14	+0.2
1,734,168	-		PFLU_RS30475	0.14	+0.2
1,734,168	-		PFLU_RS30475	0.14	+0.7
1,734,168	-		PFLU_RS30475	0.14	+0.3
1,734,168	-		PFLU_RS30475	0.14	+0.2
1,734,168	-		PFLU_RS30475	0.14	-0.8
1,734,168	-		PFLU_RS30475	0.14	+0.2
1,734,168	-		PFLU_RS30475	0.14	-1.3
1,734,168	-		PFLU_RS30475	0.14	+0.6
1,734,220	+		PFLU_RS30475	0.41	+0.4
1,734,234	+		PFLU_RS30475	0.48	+0.2
1,734,234	+		PFLU_RS30475	0.48	-0.8
1,734,234	+		PFLU_RS30475	0.48	+0.7
1,734,234	+		PFLU_RS30475	0.48	+0.7
1,734,234	+		PFLU_RS30475	0.48	-0.6
1,734,253	+		PFLU_RS30475	0.58	-0.0
1,734,253	+		PFLU_RS30475	0.58	+0.5
1,734,253	+		PFLU_RS30475	0.58	-0.1
1,734,287	+		PFLU_RS30475	0.76	-0.1
1,734,301	+		PFLU_RS30475	0.83	+0.5
1,734,317	+				+0.2
1,734,317	+				+0.9
1,734,317	+				-1.0
1,734,317	+				-0.1
1,734,317	+				+0.0
1,734,346	+				+0.7
1,734,356	+				+0.7
1,734,356	+				-1.1
1,734,356	+				-0.8