Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS06570

Experiment: D-Trehalose 5 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Trehalose 5 mM (C)
1,468,397	+		PFLU_RS06565	0.14	-1.3
1,468,397	+		PFLU_RS06565	0.14	+0.8
1,468,397	+		PFLU_RS06565	0.14	-1.2
1,468,397	+		PFLU_RS06565	0.14	-0.3
1,468,397	+		PFLU_RS06565	0.14	+0.0
1,468,397	+		PFLU_RS06565	0.14	+1.2
1,468,397	+		PFLU_RS06565	0.14	+0.3
1,468,398	-		PFLU_RS06565	0.15	+0.4
1,468,398	-		PFLU_RS06565	0.15	-0.6
1,468,398	-		PFLU_RS06565	0.15	+0.7
1,468,398	-		PFLU_RS06565	0.15	-0.6
1,468,398	-		PFLU_RS06565	0.15	+0.5
1,468,398	-		PFLU_RS06565	0.15	-0.7
1,468,398	-		PFLU_RS06565	0.15	+0.5
1,468,398	-		PFLU_RS06565	0.15	+0.1
1,468,398	-		PFLU_RS06565	0.15	+0.6
1,468,398	-		PFLU_RS06565	0.15	+0.5
1,468,398	-		PFLU_RS06565	0.15	+0.1
1,468,398	-		PFLU_RS06565	0.15	-1.7
1,468,398	-		PFLU_RS06565	0.15	+0.4
1,468,498	+		PFLU_RS06565	0.53	-0.3
1,468,498	+		PFLU_RS06565	0.53	+0.6
1,468,498	+		PFLU_RS06565	0.53	+0.6
1,468,498	+		PFLU_RS06565	0.53	-0.4
1,468,498	+		PFLU_RS06565	0.53	+1.0
1,468,498	+		PFLU_RS06565	0.53	-0.0
1,468,498	+		PFLU_RS06565	0.53	+0.9
1,468,498	+		PFLU_RS06565	0.53	+0.6
1,468,498	+		PFLU_RS06565	0.53	+0.8
1,468,498	+		PFLU_RS06565	0.53	+0.6
1,468,499	-		PFLU_RS06565	0.53	-0.7
1,468,499	-		PFLU_RS06565	0.53	+1.2
1,468,499	-		PFLU_RS06565	0.53	+0.3
1,468,499	-		PFLU_RS06565	0.53	+2.0
1,468,499	-		PFLU_RS06565	0.53	+0.6
1,468,499	-		PFLU_RS06565	0.53	-0.3
1,468,499	-		PFLU_RS06565	0.53	-0.7
1,468,499	-		PFLU_RS06565	0.53	-0.5
1,468,499	-		PFLU_RS06565	0.53	-0.6
1,468,499	-		PFLU_RS06565	0.53	-0.3
1,468,499	-		PFLU_RS06565	0.53	-0.1
1,468,499	-		PFLU_RS06565	0.53	+0.8
1,468,559	+		PFLU_RS06565	0.76	+0.2
1,468,559	+		PFLU_RS06565	0.76	-1.5
1,468,560	-		PFLU_RS06565	0.77	-2.2
1,468,560	-		PFLU_RS06565	0.77	+0.3
1,468,578	-		PFLU_RS06565	0.84	-0.0
1,468,578	-		PFLU_RS06565	0.84	-2.3
1,468,578	-		PFLU_RS06565	0.84	-0.0
1,468,600	+				-0.7
1,468,600	+				-0.3
1,468,600	+				-2.0
1,468,600	+				-0.3
1,468,600	+				+1.5
1,468,600	+				-0.3
1,468,600	+				-0.4
1,468,600	+				-1.7
1,468,601	-				-0.1
1,468,601	-				+0.3
1,468,601	-				+0.1
1,468,601	-				+0.7
1,468,601	-				+0.3
1,468,613	+				-0.4
1,468,613	+				-0.2
1,468,613	+				+1.1
1,468,613	+				-0.6
1,468,613	+				+0.3
1,468,614	-				-0.4
1,468,614	-				-0.0
1,468,614	-				+0.1
1,468,614	-				-0.5
1,468,634	-				-0.4
1,468,682	+				+0.7
1,468,682	+				+0.7
1,468,682	+				+0.3
1,468,682	+				+1.2
1,468,682	+				-1.3
1,468,682	+				+1.0
1,468,682	+				+1.4
1,468,682	+				-0.1
1,468,682	+				+0.4
1,468,682	+				+1.1
1,468,682	+				-0.6
1,468,682	+				+0.9
1,468,683	-				+1.0
1,468,683	-				-0.1
1,468,683	-				+1.3
1,468,683	-				-0.3
1,468,683	-				+0.0
1,468,683	-				+0.3
1,468,685	+				-0.7
1,468,685	+				+0.9
1,468,685	+				-2.0
1,468,685	+				-1.3
1,468,685	+				-2.1
1,468,685	+				-0.6
1,468,685	+				+1.3
1,468,685	+				-2.5
1,468,685	+				+0.2
1,468,685	+				+0.5
1,468,685	+				+0.9
1,468,686	-				-0.5
1,468,686	-				+2.0
1,468,686	-				-0.2
1,468,686	-				-1.9
1,468,686	-				-0.7
1,468,686	-				+1.3
1,468,686	-				+0.1
1,468,686	-				+0.4
1,468,686	-				+1.0
1,468,686	-				+1.3
1,468,686	-				+0.2
1,468,686	-				-0.1
1,468,686	-				+1.6
1,468,686	-				+0.5
1,468,747	+				-0.5
1,468,748	-				+1.0
1,468,777	+				+0.7
1,468,777	+				+0.7
1,468,777	+				+1.9
1,468,777	+				-0.7
1,468,777	+				+0.1
1,468,777	+				-0.5
1,468,778	-				-0.0
1,468,778	-				-0.2
1,468,778	-				+0.7
1,468,778	-				+0.7
1,468,778	-				+0.2
1,468,778	-				+1.1
1,468,778	-				+0.2
1,468,783	+				+0.8
1,468,783	+				-0.3
1,468,783	+				-0.0
1,468,783	+				-0.1
1,468,783	+				+0.3
1,468,783	+				+0.9
1,468,783	+				+1.0
1,468,783	+				+0.6
1,468,783	+				+0.0
1,468,783	+				+0.1
1,468,783	+				+1.9
1,468,783	+				-0.0
1,468,783	+				+0.5
1,468,783	+				-1.4
1,468,783	+				+1.6
1,468,783	+				+0.1
1,468,783	+				-0.3
1,468,783	+				+0.3
1,468,783	+				+1.5
1,468,783	+				+1.0
1,468,783	+				+0.3
1,468,783	+				-0.1
1,468,783	+				+0.5
1,468,783	+				-0.7
1,468,783	+				+0.7
1,468,784	-				-1.9
1,468,784	-				+0.3
1,468,784	-				-0.5
1,468,784	-				+1.2
1,468,784	-				-0.7
1,468,784	-				-3.3
1,468,784	-				-0.2
1,468,784	-				-0.5
1,468,784	-				+0.6
1,468,784	-				+0.7
1,468,784	-				-1.7
1,468,795	-				+0.2
1,468,810	+				+0.5
1,468,811	-				-0.1
1,468,811	-				+0.0
1,468,811	-				+0.1
1,468,865	+		PFLU_RS06570	0.19	+0.3
1,468,865	+		PFLU_RS06570	0.19	+0.0
1,468,866	-		PFLU_RS06570	0.19	+0.6
1,469,150	+		PFLU_RS06570	0.80	-0.3
1,469,151	-		PFLU_RS06570	0.80	-0.3
1,469,151	-		PFLU_RS06570	0.80	+1.5
1,469,199	+				+0.3
1,469,200	-				+0.3
1,469,221	+				+1.5
1,469,221	+				+1.0
1,469,221	+				+0.8
1,469,222	-				-0.5
1,469,222	-				-0.2
1,469,222	-				+1.3
1,469,253	+				+0.9
1,469,253	+				-1.6
1,469,253	+				-0.3
1,469,253	+				-0.0
1,469,253	+				-1.3
1,469,253	+				-1.7
1,469,254	-				+0.3
1,469,254	-				+1.3
1,469,300	+				+0.4
1,469,300	+				+1.1
1,469,352	+				-1.0
1,469,352	+				+0.4
1,469,352	+				+0.7
1,469,352	+				+1.0
1,469,352	+				+0.5
1,469,352	+				-2.3
1,469,352	+				-1.4
1,469,352	+				-2.4
1,469,353	-				+1.3
1,469,353	-				+1.0
1,469,353	-				-0.7
1,469,353	-				+0.2
1,469,353	-				+0.8
1,469,353	-				-1.3
1,469,355	+				-0.7
1,469,445	+				-0.5
1,469,446	-				-0.9
1,469,446	-				+1.4
1,469,446	-				-1.4
1,469,446	-				+0.5
1,469,460	+				+2.9
1,469,461	-				+0.2
1,469,473	+				-0.7
1,469,474	-				+0.6
1,469,474	-				+0.7
1,469,486	+				+0.3
1,469,486	+				+0.8
1,469,486	+				-1.4
1,469,486	+				-0.0
1,469,486	+				-0.0
1,469,486	+				+0.8
1,469,486	+				+0.1
1,469,487	-				-0.9
1,469,487	-				+0.7
1,469,487	-				-0.3
1,469,565	-				-0.3
1,469,565	-				+0.2
1,469,565	-				-0.6
1,469,565	-				+0.5
1,469,566	+				+2.0
1,469,566	+				+0.5
1,469,566	+				+2.3
1,469,566	+				+0.8
1,469,566	+				+0.3
1,469,566	+				+1.5
1,469,566	+				-1.5
1,469,566	+				+0.3
1,469,566	+				-0.5
1,469,566	+				+1.5
1,469,566	+				-0.3
1,469,566	+				-0.7
1,469,566	+				+0.6
1,469,566	+				-0.6
1,469,566	+				-0.6
1,469,566	+				+0.4
1,469,566	+				+0.0
1,469,566	+				+0.1
1,469,566	+				-0.0
1,469,567	-				+1.1
1,469,567	-				-0.1
1,469,567	-				+0.3
1,469,567	-				-1.0
1,469,567	-				-0.8
1,469,567	-				+1.3
1,469,567	-				-1.8
1,469,567	-				-0.7
1,469,567	-				-0.3
1,469,567	-				+1.3
1,469,567	-				-0.3
1,469,567	-				+0.6
1,469,567	-				+0.3
1,469,567	-				+0.5
1,469,567	-				+1.6
1,469,567	-				+0.2
1,469,567	-				-2.1
1,469,567	-				+0.9
1,469,567	-				+0.6
1,469,641	+				-0.5
1,469,641	+				-0.3
1,469,641	+				+0.6
1,469,641	+				+0.0
1,469,641	+				+0.3
1,469,642	-				+0.1
1,469,642	-				-0.0
1,469,642	-				-0.0
1,469,658	-				+0.2
1,469,658	-				-0.2