Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS06410

Experiment: D-Trehalose 5 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Trehalose 5 mM (C)
1,434,935	+		PFLU_RS06400	0.44	-0.6
1,434,935	+		PFLU_RS06400	0.44	-0.3
1,434,935	+		PFLU_RS06400	0.44	+0.7
1,434,935	+		PFLU_RS06400	0.44	+0.3
1,434,935	+		PFLU_RS06400	0.44	-1.1
1,434,935	+		PFLU_RS06400	0.44	-0.7
1,434,935	+		PFLU_RS06400	0.44	+1.2
1,434,935	+		PFLU_RS06400	0.44	-0.1
1,434,936	-		PFLU_RS06400	0.44	-0.3
1,434,936	-		PFLU_RS06400	0.44	-0.2
1,434,936	-		PFLU_RS06400	0.44	+0.4
1,434,936	-		PFLU_RS06400	0.44	+1.1
1,434,936	-		PFLU_RS06400	0.44	-0.4
1,434,936	-		PFLU_RS06400	0.44	-0.6
1,434,936	-		PFLU_RS06400	0.44	-0.7
1,434,936	-		PFLU_RS06400	0.44	+0.3
1,434,936	-		PFLU_RS06400	0.44	-1.3
1,434,936	-		PFLU_RS06400	0.44	-1.7
1,434,936	-		PFLU_RS06400	0.44	-0.7
1,434,936	-		PFLU_RS06400	0.44	-0.0
1,434,936	-		PFLU_RS06400	0.44	-0.9
1,434,936	-		PFLU_RS06400	0.44	+0.4
1,434,988	+		PFLU_RS06400	0.50	+0.3
1,435,061	+		PFLU_RS06400	0.59	-1.1
1,435,137	-		PFLU_RS06400	0.68	-0.8
1,435,332	-				+0.2
1,435,343	+				+1.3
1,435,343	+				-0.5
1,435,343	+				-0.1
1,435,343	+				-0.3
1,435,343	+				-0.1
1,435,343	+				-0.4
1,435,343	+				+0.3
1,435,343	+				-0.3
1,435,343	+				+0.8
1,435,344	-				-0.3
1,435,344	-				+1.3
1,435,344	-				-0.3
1,435,344	-				-0.5
1,435,344	-				+0.1
1,435,344	-				-0.3
1,435,344	-				-0.9
1,435,344	-				+1.3
1,435,344	-				-0.2
1,435,344	-				+1.1
1,435,344	-				+0.3
1,435,344	-				-0.4
1,435,344	-				-1.3
1,435,344	-				-1.0
1,435,344	-				-0.7
1,435,344	-				+0.7
1,435,344	-				-1.7
1,435,344	-				-0.5
1,435,344	-				+0.6
1,435,422	+				-1.3
1,435,422	+				-0.3
1,435,422	+				+2.6
1,435,423	-				+0.4
1,435,426	+				-1.0
1,435,426	+				+1.3
1,435,426	+				+0.4
1,435,426	+				-0.8
1,435,426	+				-0.5
1,435,426	+				-0.5
1,435,427	-				+1.4
1,435,427	-				+0.2
1,435,427	-				+0.7
1,435,427	-				+0.2
1,435,427	-				-0.3
1,435,444	+				+0.7
1,435,444	+				+0.2
1,435,966	+				-0.1
1,436,037	+				+0.3
1,436,072	+		PFLU_RS06410	0.13	+0.0
1,436,097	+		PFLU_RS06410	0.15	+0.2
1,436,158	+		PFLU_RS06410	0.21	+0.2
1,436,158	+		PFLU_RS06410	0.21	-2.8
1,436,158	+		PFLU_RS06410	0.21	-0.5
1,436,158	+		PFLU_RS06410	0.21	-0.1
1,436,158	+		PFLU_RS06410	0.21	+0.3
1,436,158	+		PFLU_RS06410	0.21	+0.0
1,436,158	+		PFLU_RS06410	0.21	-0.4
1,436,159	-		PFLU_RS06410	0.21	-1.5
1,436,159	-		PFLU_RS06410	0.21	-0.4
1,436,159	-		PFLU_RS06410	0.21	-0.6
1,436,159	-		PFLU_RS06410	0.21	+1.2
1,436,159	-		PFLU_RS06410	0.21	-0.9
1,436,213	+		PFLU_RS06410	0.26	-1.3
1,436,213	+		PFLU_RS06410	0.26	-0.4
1,436,413	+		PFLU_RS06410	0.45	-1.5
1,436,413	+		PFLU_RS06410	0.45	+0.1
1,436,413	+		PFLU_RS06410	0.45	-1.0
1,436,413	+		PFLU_RS06410	0.45	-0.6
1,436,413	+		PFLU_RS06410	0.45	-0.3
1,436,414	-		PFLU_RS06410	0.45	+0.2
1,436,414	-		PFLU_RS06410	0.45	+0.6
1,436,414	-		PFLU_RS06410	0.45	+0.5
1,436,414	-		PFLU_RS06410	0.45	-0.4
1,436,539	+		PFLU_RS06410	0.57	+0.1
1,436,539	+		PFLU_RS06410	0.57	+0.6
1,436,539	+		PFLU_RS06410	0.57	+1.3
1,436,540	-		PFLU_RS06410	0.57	-0.3
1,436,540	-		PFLU_RS06410	0.57	+0.6
1,436,540	-		PFLU_RS06410	0.57	+0.6
1,436,540	-		PFLU_RS06410	0.57	-0.3
1,436,540	-		PFLU_RS06410	0.57	+1.3
1,436,540	-		PFLU_RS06410	0.57	-0.9
1,436,866	+		PFLU_RS06410	0.88	-0.8
1,436,866	+		PFLU_RS06410	0.88	-0.5
1,436,867	-		PFLU_RS06410	0.88	-0.1
1,436,984	+				+0.0
1,436,984	+				-0.9
1,436,984	+				-0.5
1,436,984	+				+0.3
1,436,984	+				+0.5
1,436,984	+				+1.3
1,436,984	+				+0.0
1,436,985	-				+0.2
1,436,985	-				+0.5
1,436,985	-				+0.8
1,436,985	-				+0.2
1,437,036	+				+0.8
1,437,036	+				-0.4
1,437,036	+				+0.7
1,437,036	+				-0.3
1,437,036	+				+0.0
1,437,036	+				+0.6
1,437,037	-				+0.9
1,437,037	-				-0.3
1,437,037	-				-1.3
1,437,037	-				+0.0
1,437,037	-				+0.2
1,437,037	-				-1.5
1,437,037	-				-0.3
1,437,037	-				-0.4
1,437,037	-				+1.5
1,437,037	-				-1.8
1,437,037	-				+1.3
1,437,037	-				+1.0
1,437,037	-				+2.5
1,437,037	-				-1.7
1,437,054	+		PFLU_RS06415	0.10	+1.5
1,437,055	-		PFLU_RS06415	0.10	-1.1
1,437,158	+		PFLU_RS06415	0.24	+1.1
1,437,158	+		PFLU_RS06415	0.24	+0.0
1,437,282	+		PFLU_RS06415	0.40	-0.7
1,437,282	+		PFLU_RS06415	0.40	-0.3
1,437,283	-		PFLU_RS06415	0.41	-1.3
1,437,283	-		PFLU_RS06415	0.41	-0.1
1,437,283	-		PFLU_RS06415	0.41	-0.7
1,437,387	+		PFLU_RS06415	0.54	-0.7
1,437,387	+		PFLU_RS06415	0.54	-1.0
1,437,388	-		PFLU_RS06415	0.55	-0.5
1,437,388	-		PFLU_RS06415	0.55	-0.0
1,437,388	-		PFLU_RS06415	0.55	+0.0
1,437,388	-		PFLU_RS06415	0.55	+0.0
1,437,388	-		PFLU_RS06415	0.55	+0.1
1,437,482	+		PFLU_RS06415	0.67	-0.1
1,437,482	+		PFLU_RS06415	0.67	+0.3
1,437,483	-		PFLU_RS06415	0.67	-0.8
1,437,483	-		PFLU_RS06415	0.67	+0.8
1,437,544	+		PFLU_RS06415	0.75	+0.2
1,437,545	-		PFLU_RS06415	0.75	-1.6
1,437,545	-		PFLU_RS06415	0.75	-0.1
1,437,570	+		PFLU_RS06415	0.79	+2.6
1,437,570	+		PFLU_RS06415	0.79	+0.0
1,437,570	+		PFLU_RS06415	0.79	+0.8
1,437,571	-		PFLU_RS06415	0.79	+0.0
1,437,571	-		PFLU_RS06415	0.79	+0.5
1,437,642	+		PFLU_RS06415	0.88	-1.0
1,437,642	+		PFLU_RS06415	0.88	-1.0
1,437,642	+		PFLU_RS06415	0.88	+0.0
1,437,642	+		PFLU_RS06415	0.88	+0.3
1,437,642	+		PFLU_RS06415	0.88	+0.0
1,437,642	+		PFLU_RS06415	0.88	-1.0
1,437,642	+		PFLU_RS06415	0.88	-1.5
1,437,642	+		PFLU_RS06415	0.88	-1.1
1,437,642	+		PFLU_RS06415	0.88	-0.8
1,437,642	+		PFLU_RS06415	0.88	+0.9
1,437,642	+		PFLU_RS06415	0.88	-0.4
1,437,642	+		PFLU_RS06415	0.88	-3.0
1,437,642	+		PFLU_RS06415	0.88	-0.8
1,437,642	+		PFLU_RS06415	0.88	+0.7
1,437,643	-		PFLU_RS06415	0.89	-1.4
1,437,643	-		PFLU_RS06415	0.89	-0.4
1,437,643	-		PFLU_RS06415	0.89	-1.8
1,437,643	-		PFLU_RS06415	0.89	+0.2
1,437,643	-		PFLU_RS06415	0.89	-0.2
1,437,643	-		PFLU_RS06415	0.89	+0.0
1,437,643	-		PFLU_RS06415	0.89	-1.7
1,437,643	-		PFLU_RS06415	0.89	-0.3
1,437,653	+		PFLU_RS06415	0.90	-0.9
1,437,653	+		PFLU_RS06415	0.90	+0.1
1,437,653	+		PFLU_RS06415	0.90	+0.6
1,437,653	+		PFLU_RS06415	0.90	+0.3
1,437,654	-				+0.5
1,437,812	+		PFLU_RS06420	0.12	-1.3
1,437,812	+		PFLU_RS06420	0.12	-1.3
1,437,812	+		PFLU_RS06420	0.12	+1.0
1,437,812	+		PFLU_RS06420	0.12	-0.3
1,437,812	+		PFLU_RS06420	0.12	-0.3
1,437,812	+		PFLU_RS06420	0.12	+1.3
1,437,812	+		PFLU_RS06420	0.12	+0.1
1,437,812	+		PFLU_RS06420	0.12	+0.3
1,437,813	-		PFLU_RS06420	0.13	+0.2
1,437,813	-		PFLU_RS06420	0.13	-0.3
1,437,813	-		PFLU_RS06420	0.13	+0.9
1,437,813	-		PFLU_RS06420	0.13	-0.1
1,437,813	-		PFLU_RS06420	0.13	+0.2
1,437,859	+		PFLU_RS06420	0.19	+0.7
1,437,859	+		PFLU_RS06420	0.19	+0.7
1,437,905	+		PFLU_RS06420	0.26	-0.7
1,437,905	+		PFLU_RS06420	0.26	-0.3
1,437,905	+		PFLU_RS06420	0.26	-1.8
1,437,906	-		PFLU_RS06420	0.26	+1.3
1,437,906	-		PFLU_RS06420	0.26	+1.3
1,437,956	+		PFLU_RS06420	0.34	-0.5
1,437,956	+		PFLU_RS06420	0.34	-0.7
1,437,956	+		PFLU_RS06420	0.34	-0.7
1,437,956	+		PFLU_RS06420	0.34	-0.5
1,437,956	+		PFLU_RS06420	0.34	-0.0
1,437,956	+		PFLU_RS06420	0.34	+1.2
1,437,956	+		PFLU_RS06420	0.34	+0.3
1,437,956	+		PFLU_RS06420	0.34	+0.2
1,437,956	+		PFLU_RS06420	0.34	-0.7
1,437,956	+		PFLU_RS06420	0.34	+0.2
1,437,956	+		PFLU_RS06420	0.34	-0.7
1,437,956	+		PFLU_RS06420	0.34	+0.3
1,437,956	+		PFLU_RS06420	0.34	-0.9
1,437,957	-		PFLU_RS06420	0.34	-1.5
1,437,957	-		PFLU_RS06420	0.34	-1.3
1,437,957	-		PFLU_RS06420	0.34	+0.7
1,437,957	-		PFLU_RS06420	0.34	+0.1
1,437,957	-		PFLU_RS06420	0.34	+1.8
1,437,957	-		PFLU_RS06420	0.34	-0.4
1,437,957	-		PFLU_RS06420	0.34	+0.5
1,437,957	-		PFLU_RS06420	0.34	-0.4
1,437,957	-		PFLU_RS06420	0.34	-1.0
1,437,957	-		PFLU_RS06420	0.34	-0.5
1,437,957	-		PFLU_RS06420	0.34	+0.3