Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS05710

Experiment: D-Trehalose 5 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Trehalose 5 mM (C)
1,286,777	+				+0.4
1,286,777	+				-0.5
1,286,777	+				+0.4
1,286,777	+				+0.7
1,286,777	+				+0.4
1,286,777	+				+0.3
1,286,777	+				-0.1
1,286,777	+				+0.9
1,286,777	+				-1.2
1,286,778	-				-1.3
1,286,778	-				+0.3
1,286,778	-				+1.4
1,286,778	-				-0.5
1,286,778	-				-0.5
1,286,807	+				+0.3
1,286,807	+				-0.5
1,286,808	-				+0.3
1,286,820	+				-0.5
1,286,821	-				-0.2
1,286,821	-				-0.3
1,286,821	-				+2.7
1,286,853	+				-0.1
1,286,921	+		PFLU_RS05705	0.18	+1.0
1,286,921	+		PFLU_RS05705	0.18	+0.4
1,286,921	+		PFLU_RS05705	0.18	+2.9
1,286,921	+		PFLU_RS05705	0.18	+0.4
1,286,921	+		PFLU_RS05705	0.18	+0.1
1,286,922	-		PFLU_RS05705	0.18	-0.3
1,286,922	-		PFLU_RS05705	0.18	+0.1
1,286,922	-		PFLU_RS05705	0.18	+0.4
1,286,922	-		PFLU_RS05705	0.18	-0.8
1,286,939	+		PFLU_RS05705	0.21	-3.4
1,286,939	+		PFLU_RS05705	0.21	+1.0
1,287,113	+		PFLU_RS05705	0.50	-0.1
1,287,113	+		PFLU_RS05705	0.50	-0.7
1,287,113	+		PFLU_RS05705	0.50	+0.1
1,287,113	+		PFLU_RS05705	0.50	-0.5
1,287,113	+		PFLU_RS05705	0.50	-0.5
1,287,113	+		PFLU_RS05705	0.50	+0.4
1,287,114	-		PFLU_RS05705	0.50	-0.4
1,287,114	-		PFLU_RS05705	0.50	+0.8
1,287,114	-		PFLU_RS05705	0.50	-0.8
1,287,114	-		PFLU_RS05705	0.50	-1.3
1,287,114	-		PFLU_RS05705	0.50	+1.6
1,287,114	-		PFLU_RS05705	0.50	-2.2
1,287,114	-		PFLU_RS05705	0.50	+0.2
1,287,114	-		PFLU_RS05705	0.50	+0.6
1,287,114	-		PFLU_RS05705	0.50	+0.1
1,287,114	-		PFLU_RS05705	0.50	+0.8
1,287,155	+		PFLU_RS05705	0.57	-0.5
1,287,155	+		PFLU_RS05705	0.57	-0.6
1,287,155	+		PFLU_RS05705	0.57	+0.1
1,287,155	+		PFLU_RS05705	0.57	-0.5
1,287,156	-		PFLU_RS05705	0.57	-0.3
1,287,156	-		PFLU_RS05705	0.57	-0.1
1,287,156	-		PFLU_RS05705	0.57	+0.1
1,287,156	-		PFLU_RS05705	0.57	+0.0
1,287,156	-		PFLU_RS05705	0.57	+0.4
1,287,156	-		PFLU_RS05705	0.57	+0.5
1,287,156	-		PFLU_RS05705	0.57	+1.2
1,287,156	-		PFLU_RS05705	0.57	-1.1
1,287,260	-		PFLU_RS05705	0.74	+0.2
1,287,260	-		PFLU_RS05705	0.74	+0.7
1,287,260	-		PFLU_RS05705	0.74	-1.3
1,287,260	-		PFLU_RS05705	0.74	+0.4
1,287,386	+				-0.6
1,287,387	-				+0.2
1,287,387	-				-1.1
1,287,413	+				+1.5
1,287,413	+				-0.1
1,287,414	-				+0.5
1,287,414	-				-0.0
1,287,414	-				+0.4
1,287,414	-				+0.9
1,287,414	-				+0.0
1,287,414	-				-0.8
1,287,429	+				-1.0
1,287,429	+				+0.4
1,287,430	-				+0.4
1,287,430	-				-0.7
1,287,466	-				+0.1
1,287,466	-				-0.2
1,287,563	+				+1.0
1,287,583	+				+2.2
1,287,583	+				-0.1
1,287,583	+				+0.5
1,287,584	-				-1.3
1,287,584	-				+0.9
1,287,584	-				-0.5
1,287,584	-				-0.2
1,287,584	-				-1.6
1,287,584	-				+0.7
1,287,584	-				-0.2
1,287,591	+				+0.8
1,287,591	+				-0.1
1,287,591	+				-0.3
1,287,591	+				-0.8
1,287,592	-				-0.6
1,287,592	-				+0.4
1,287,655	+				-0.1
1,287,655	+				-0.6
1,287,655	+				+0.9
1,287,655	+				-0.6
1,287,691	+				+0.0
1,287,691	+				-0.1
1,287,691	+				-1.2
1,287,691	+				-1.6
1,287,691	+				-1.3
1,287,691	+				+0.8
1,287,691	+				+1.0
1,287,692	-				+0.2
1,287,692	-				+0.8
1,287,692	-				+1.4
1,287,692	-				+0.3
1,287,692	-				-0.3
1,287,692	-				+0.4
1,287,709	+				+0.7
1,287,709	+				-1.3
1,287,709	+				-0.2
1,287,709	+				+0.6
1,287,709	+				+2.5
1,287,709	+				+0.6
1,287,709	+				-0.3
1,287,710	-				+0.2
1,287,710	-				+0.6
1,287,710	-				-0.2
1,287,710	-				+0.6
1,287,710	-				-0.4
1,287,722	+				-0.6
1,287,722	+				-0.3
1,287,722	+				+0.4
1,287,722	+				-0.3
1,287,722	+				+0.4
1,287,722	+				+0.9
1,287,722	+				-0.2
1,287,722	+				-0.5
1,287,722	+				-1.2
1,287,723	-				+0.5
1,287,723	-				+0.0
1,287,723	-				+0.9
1,287,723	-				+0.9
1,287,723	-				+0.4
1,287,723	-				-1.1
1,287,723	-				-1.0
1,287,724	+				-0.0
1,287,724	+				-0.2
1,287,724	+				-0.9
1,287,724	+				-0.2
1,287,725	-				-0.9
1,287,725	-				+0.7
1,287,725	-				-1.0
1,287,755	-				+1.4
1,287,755	-				-1.2
1,287,755	-				-0.9
1,287,755	-				-2.2
1,287,755	-				-0.2
1,287,755	-				+0.0