Experiment: D-Trehalose 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PFLU_RS03095 and PFLU_RS03100 are separated by 77 nucleotides PFLU_RS03100 and PFLU_RS03105 are separated by 90 nucleotides
PFLU_RS03095: PFLU_RS03095 - alpha-2-macroglobulin family protein, at 714,180 to 719,078
_RS03095
PFLU_RS03100: PFLU_RS03100 - hypothetical protein, at 719,156 to 719,449
_RS03100
PFLU_RS03105: PFLU_RS03105 - peptidoglycan glycosyltransferase PbpC, at 719,540 to 721,870
_RS03105
Position (kb) 719
720 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 718.368 kb on + strand, within PFLU_RS03095 at 718.368 kb on + strand, within PFLU_RS03095 at 718.368 kb on + strand, within PFLU_RS03095 at 718.368 kb on + strand, within PFLU_RS03095 at 718.369 kb on - strand, within PFLU_RS03095 at 718.369 kb on - strand, within PFLU_RS03095 at 718.369 kb on - strand, within PFLU_RS03095 at 718.369 kb on - strand, within PFLU_RS03095 at 718.369 kb on - strand, within PFLU_RS03095 at 718.485 kb on - strand, within PFLU_RS03095 at 718.485 kb on - strand, within PFLU_RS03095 at 718.566 kb on + strand, within PFLU_RS03095 at 718.566 kb on + strand, within PFLU_RS03095 at 718.566 kb on + strand, within PFLU_RS03095 at 718.566 kb on + strand, within PFLU_RS03095 at 718.566 kb on + strand, within PFLU_RS03095 at 718.567 kb on - strand, within PFLU_RS03095 at 718.567 kb on - strand, within PFLU_RS03095 at 718.567 kb on - strand, within PFLU_RS03095 at 718.567 kb on - strand, within PFLU_RS03095 at 718.567 kb on - strand, within PFLU_RS03095 at 718.567 kb on - strand, within PFLU_RS03095 at 718.644 kb on + strand at 718.644 kb on + strand at 718.644 kb on + strand at 718.644 kb on + strand at 718.644 kb on + strand at 718.905 kb on + strand at 718.906 kb on - strand at 718.953 kb on + strand at 718.954 kb on - strand at 718.954 kb on - strand at 718.983 kb on + strand at 718.984 kb on - strand at 718.984 kb on - strand at 718.984 kb on - strand at 719.016 kb on + strand at 719.017 kb on - strand at 719.079 kb on + strand at 719.079 kb on + strand at 719.083 kb on + strand at 719.083 kb on + strand at 719.083 kb on + strand at 719.083 kb on + strand at 719.083 kb on + strand at 719.083 kb on + strand at 719.083 kb on + strand at 719.084 kb on - strand at 719.084 kb on - strand at 719.084 kb on - strand at 719.084 kb on - strand at 719.084 kb on - strand at 719.250 kb on + strand, within PFLU_RS03100 at 719.250 kb on + strand, within PFLU_RS03100 at 719.390 kb on - strand, within PFLU_RS03100 at 719.441 kb on + strand at 719.441 kb on + strand at 719.441 kb on + strand at 719.442 kb on - strand at 719.442 kb on - strand at 719.442 kb on - strand at 719.442 kb on - strand at 719.442 kb on - strand at 719.442 kb on - strand at 719.496 kb on + strand at 719.496 kb on + strand at 719.497 kb on - strand at 719.509 kb on + strand at 719.509 kb on + strand at 719.509 kb on + strand at 719.509 kb on + strand at 719.509 kb on + strand at 719.510 kb on - strand at 719.510 kb on - strand at 719.510 kb on - strand at 719.510 kb on - strand at 719.510 kb on - strand at 719.517 kb on + strand at 719.517 kb on + strand at 719.517 kb on + strand at 719.518 kb on - strand at 719.518 kb on - strand at 719.518 kb on - strand at 719.519 kb on + strand at 719.519 kb on + strand at 719.519 kb on + strand at 719.519 kb on + strand at 719.519 kb on + strand at 719.519 kb on + strand at 719.519 kb on + strand at 719.520 kb on - strand at 719.520 kb on - strand at 719.520 kb on - strand at 719.520 kb on - strand at 719.520 kb on - strand at 719.520 kb on - strand at 719.520 kb on - strand at 719.520 kb on - strand at 719.520 kb on - strand at 719.520 kb on - strand at 719.525 kb on + strand at 719.525 kb on + strand at 719.525 kb on + strand at 719.525 kb on + strand at 719.526 kb on - strand at 719.526 kb on - strand at 719.526 kb on - strand at 719.526 kb on - strand at 719.526 kb on - strand at 719.526 kb on - strand at 719.554 kb on - strand at 719.554 kb on - strand at 719.554 kb on - strand at 719.601 kb on + strand at 719.751 kb on - strand at 719.751 kb on - strand at 719.753 kb on + strand at 719.753 kb on + strand at 719.753 kb on + strand at 719.753 kb on + strand at 719.753 kb on + strand at 719.754 kb on - strand at 719.754 kb on - strand at 719.754 kb on - strand at 719.754 kb on - strand at 719.754 kb on - strand at 719.774 kb on + strand, within PFLU_RS03105 at 719.774 kb on + strand, within PFLU_RS03105 at 719.774 kb on + strand, within PFLU_RS03105 at 719.774 kb on + strand, within PFLU_RS03105 at 719.774 kb on + strand, within PFLU_RS03105 at 719.774 kb on + strand, within PFLU_RS03105 at 719.775 kb on - strand, within PFLU_RS03105 at 719.775 kb on - strand, within PFLU_RS03105 at 719.775 kb on - strand, within PFLU_RS03105 at 719.775 kb on - strand, within PFLU_RS03105 at 719.775 kb on - strand, within PFLU_RS03105 at 719.775 kb on - strand, within PFLU_RS03105 at 719.775 kb on - strand, within PFLU_RS03105 at 719.775 kb on - strand, within PFLU_RS03105 at 719.775 kb on - strand, within PFLU_RS03105 at 719.775 kb on - strand, within PFLU_RS03105 at 719.775 kb on - strand, within PFLU_RS03105 at 719.775 kb on - strand, within PFLU_RS03105 at 719.775 kb on - strand, within PFLU_RS03105 at 719.775 kb on - strand, within PFLU_RS03105 at 719.793 kb on - strand, within PFLU_RS03105 at 719.808 kb on + strand, within PFLU_RS03105 at 719.826 kb on + strand, within PFLU_RS03105 at 719.999 kb on - strand, within PFLU_RS03105 at 720.005 kb on + strand, within PFLU_RS03105 at 720.005 kb on + strand, within PFLU_RS03105 at 720.006 kb on - strand, within PFLU_RS03105 at 720.031 kb on + strand, within PFLU_RS03105 at 720.031 kb on + strand, within PFLU_RS03105 at 720.065 kb on + strand, within PFLU_RS03105 at 720.066 kb on - strand, within PFLU_RS03105 at 720.066 kb on - strand, within PFLU_RS03105 at 720.066 kb on - strand, within PFLU_RS03105 at 720.066 kb on - strand, within PFLU_RS03105
Per-strain Table
Position Strand Gene LocusTag Fraction D-Trehalose 5 mM (C) remove 718,368 + PFLU_RS03095 0.85 -0.0 718,368 + PFLU_RS03095 0.85 +0.2 718,368 + PFLU_RS03095 0.85 +0.2 718,368 + PFLU_RS03095 0.85 -0.7 718,369 - PFLU_RS03095 0.86 +0.6 718,369 - PFLU_RS03095 0.86 +0.9 718,369 - PFLU_RS03095 0.86 +3.1 718,369 - PFLU_RS03095 0.86 +0.6 718,369 - PFLU_RS03095 0.86 +0.1 718,485 - PFLU_RS03095 0.88 +0.0 718,485 - PFLU_RS03095 0.88 -0.3 718,566 + PFLU_RS03095 0.90 -0.4 718,566 + PFLU_RS03095 0.90 +1.0 718,566 + PFLU_RS03095 0.90 -0.4 718,566 + PFLU_RS03095 0.90 +0.1 718,566 + PFLU_RS03095 0.90 -0.3 718,567 - PFLU_RS03095 0.90 +0.5 718,567 - PFLU_RS03095 0.90 -1.1 718,567 - PFLU_RS03095 0.90 +0.7 718,567 - PFLU_RS03095 0.90 +0.8 718,567 - PFLU_RS03095 0.90 -0.5 718,567 - PFLU_RS03095 0.90 -1.4 718,644 + +1.5 718,644 + +0.4 718,644 + +0.6 718,644 + -0.2 718,644 + -1.7 718,905 + -0.2 718,906 - -0.3 718,953 + +0.3 718,954 - -1.1 718,954 - +0.7 718,983 + -0.3 718,984 - +0.1 718,984 - +0.4 718,984 - +0.5 719,016 + -0.3 719,017 - +0.9 719,079 + +0.8 719,079 + -1.1 719,083 + +0.2 719,083 + -0.7 719,083 + -0.9 719,083 + -1.4 719,083 + -1.6 719,083 + +2.0 719,083 + +0.3 719,084 - -0.2 719,084 - -0.4 719,084 - -0.1 719,084 - +0.8 719,084 - +0.6 719,250 + PFLU_RS03100 0.32 +1.5 719,250 + PFLU_RS03100 0.32 -0.8 719,390 - PFLU_RS03100 0.80 +0.2 719,441 + +0.5 719,441 + +0.6 719,441 + -0.7 719,442 - -2.6 719,442 - +0.4 719,442 - -0.4 719,442 - -1.0 719,442 - +0.2 719,442 - +0.5 719,496 + +0.0 719,496 + -0.1 719,497 - -0.9 719,509 + +0.5 719,509 + +0.3 719,509 + -0.1 719,509 + -0.3 719,509 + +0.7 719,510 - +0.4 719,510 - -0.0 719,510 - +1.5 719,510 - -0.2 719,510 - -0.3 719,517 + +1.5 719,517 + -0.5 719,517 + -0.0 719,518 - -0.3 719,518 - -0.3 719,518 - -0.3 719,519 + +0.8 719,519 + +0.1 719,519 + +1.1 719,519 + -1.8 719,519 + -0.3 719,519 + -0.7 719,519 + +0.2 719,520 - -0.6 719,520 - -0.5 719,520 - -0.6 719,520 - -0.7 719,520 - +1.2 719,520 - -0.7 719,520 - -0.6 719,520 - +0.1 719,520 - +1.1 719,520 - -0.2 719,525 + -0.6 719,525 + +0.1 719,525 + +0.3 719,525 + -0.3 719,526 - -0.1 719,526 - +0.4 719,526 - +1.5 719,526 - +1.2 719,526 - +0.4 719,526 - +0.2 719,554 - +0.9 719,554 - -0.6 719,554 - +0.4 719,601 + -1.5 719,751 - +0.1 719,751 - +0.4 719,753 + +0.5 719,753 + -1.3 719,753 + -0.3 719,753 + -0.7 719,753 + +2.0 719,754 - +0.4 719,754 - -0.1 719,754 - +0.9 719,754 - +0.1 719,754 - -0.4 719,774 + PFLU_RS03105 0.10 -0.0 719,774 + PFLU_RS03105 0.10 +0.6 719,774 + PFLU_RS03105 0.10 +0.4 719,774 + PFLU_RS03105 0.10 -0.1 719,774 + PFLU_RS03105 0.10 -0.4 719,774 + PFLU_RS03105 0.10 -1.4 719,775 - PFLU_RS03105 0.10 -0.2 719,775 - PFLU_RS03105 0.10 -2.4 719,775 - PFLU_RS03105 0.10 +0.9 719,775 - PFLU_RS03105 0.10 -0.5 719,775 - PFLU_RS03105 0.10 -0.2 719,775 - PFLU_RS03105 0.10 -1.0 719,775 - PFLU_RS03105 0.10 +0.4 719,775 - PFLU_RS03105 0.10 -0.7 719,775 - PFLU_RS03105 0.10 -0.3 719,775 - PFLU_RS03105 0.10 +0.1 719,775 - PFLU_RS03105 0.10 +0.7 719,775 - PFLU_RS03105 0.10 +0.5 719,775 - PFLU_RS03105 0.10 +0.0 719,775 - PFLU_RS03105 0.10 +0.9 719,793 - PFLU_RS03105 0.11 +0.2 719,808 + PFLU_RS03105 0.11 -2.3 719,826 + PFLU_RS03105 0.12 -1.3 719,999 - PFLU_RS03105 0.20 +0.5 720,005 + PFLU_RS03105 0.20 -0.1 720,005 + PFLU_RS03105 0.20 -1.1 720,006 - PFLU_RS03105 0.20 -1.6 720,031 + PFLU_RS03105 0.21 -1.6 720,031 + PFLU_RS03105 0.21 +0.7 720,065 + PFLU_RS03105 0.23 -0.2 720,066 - PFLU_RS03105 0.23 -0.5 720,066 - PFLU_RS03105 0.23 +0.7 720,066 - PFLU_RS03105 0.23 -0.1 720,066 - PFLU_RS03105 0.23 +0.6
Or see this region's nucleotide sequence