Experiment: D-Trehalose 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PFLU_RS01905 and PFLU_RS01910 overlap by 4 nucleotides PFLU_RS01910 and PFLU_RS01915 overlap by 1 nucleotides PFLU_RS01915 and PFLU_RS01920 are separated by 144 nucleotides
PFLU_RS01905: PFLU_RS01905 - ubiquinone biosynthesis regulatory protein kinase UbiB, at 427,935 to 429,539
_RS01905
PFLU_RS01910: PFLU_RS01910 - sterol-binding protein, at 429,536 to 430,159
_RS01910
PFLU_RS01915: PFLU_RS01915 - bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase UbiE, at 430,159 to 430,929
_RS01915
PFLU_RS01920: PFLU_RS01920 - hypothetical protein, at 431,074 to 431,349
_RS01920
Position (kb) 429
430
431 Strain fitness (log2 ratio) -2
-1
0
1
2 at 429.684 kb on + strand, within PFLU_RS01910 at 429.685 kb on - strand, within PFLU_RS01910 at 429.802 kb on - strand, within PFLU_RS01910 at 429.802 kb on - strand, within PFLU_RS01910 at 430.016 kb on - strand, within PFLU_RS01910 at 430.930 kb on - strand at 430.930 kb on - strand at 430.963 kb on + strand at 430.963 kb on + strand at 430.963 kb on + strand at 430.963 kb on + strand at 430.963 kb on + strand at 430.964 kb on - strand at 430.964 kb on - strand at 430.964 kb on - strand at 430.964 kb on - strand at 431.002 kb on + strand at 431.002 kb on + strand at 431.002 kb on + strand at 431.002 kb on + strand at 431.002 kb on + strand at 431.002 kb on + strand at 431.002 kb on + strand at 431.002 kb on + strand at 431.002 kb on + strand at 431.002 kb on + strand at 431.002 kb on + strand at 431.003 kb on - strand at 431.003 kb on - strand at 431.003 kb on - strand at 431.003 kb on - strand at 431.003 kb on - strand at 431.003 kb on - strand at 431.003 kb on - strand at 431.003 kb on - strand at 431.003 kb on - strand at 431.042 kb on + strand at 431.043 kb on - strand at 431.054 kb on + strand at 431.057 kb on - strand at 431.057 kb on - strand at 431.057 kb on - strand at 431.082 kb on + strand at 431.082 kb on + strand at 431.082 kb on + strand at 431.082 kb on + strand at 431.082 kb on + strand at 431.082 kb on + strand at 431.083 kb on - strand at 431.083 kb on - strand at 431.083 kb on - strand at 431.083 kb on - strand at 431.083 kb on - strand at 431.083 kb on - strand at 431.083 kb on - strand at 431.085 kb on - strand at 431.085 kb on - strand at 431.112 kb on + strand, within PFLU_RS01920
Per-strain Table
Position Strand Gene LocusTag Fraction D-Trehalose 5 mM (C) remove 429,684 + PFLU_RS01910 0.24 -0.4 429,685 - PFLU_RS01910 0.24 +1.8 429,802 - PFLU_RS01910 0.43 +1.6 429,802 - PFLU_RS01910 0.43 +0.1 430,016 - PFLU_RS01910 0.77 -0.0 430,930 - -1.8 430,930 - -0.6 430,963 + +0.9 430,963 + -0.4 430,963 + +0.2 430,963 + -0.6 430,963 + +0.2 430,964 - -0.4 430,964 - +0.3 430,964 - +0.4 430,964 - -0.2 431,002 + +0.1 431,002 + -1.9 431,002 + +0.6 431,002 + +0.5 431,002 + +0.8 431,002 + +1.6 431,002 + +0.3 431,002 + -1.0 431,002 + -0.2 431,002 + +0.1 431,002 + +0.7 431,003 - -0.2 431,003 - -0.8 431,003 - +0.6 431,003 - -0.8 431,003 - +1.8 431,003 - -0.2 431,003 - -0.4 431,003 - +0.3 431,003 - -0.0 431,042 + -0.0 431,043 - -0.4 431,054 + -2.6 431,057 - +0.2 431,057 - +0.4 431,057 - -0.4 431,082 + -0.6 431,082 + +0.6 431,082 + -0.6 431,082 + +1.1 431,082 + -0.1 431,082 + +1.7 431,083 - +0.0 431,083 - +0.0 431,083 - +0.0 431,083 - -1.9 431,083 - -0.4 431,083 - +0.7 431,083 - +0.3 431,085 - -0.4 431,085 - -0.6 431,112 + PFLU_RS01920 0.14 -0.0
Or see this region's nucleotide sequence