Experiment: D-Trehalose 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PFLU_RS01655 and PFLU_RS01660 are separated by 151 nucleotides PFLU_RS01660 and PFLU_RS01665 are separated by 1 nucleotides PFLU_RS01665 and PFLU_RS01670 are separated by 39 nucleotides PFLU_RS01670 and PFLU_RS01675 are separated by 119 nucleotides
PFLU_RS01655: PFLU_RS01655 - 2,3-bisphosphoglycerate-independent phosphoglycerate mutase, at 369,796 to 371,322
_RS01655
PFLU_RS01660: PFLU_RS01660 - rhodanese-like domain-containing protein, at 371,474 to 371,887
_RS01660
PFLU_RS01665: PFLU_RS01665 - glutaredoxin 3, at 371,889 to 372,143
_RS01665
PFLU_RS01670: PFLU_RS01670 - protein-export chaperone SecB, at 372,183 to 372,662
_RS01670
PFLU_RS01675: PFLU_RS01675 - tRNA (cytidine(34)-2'-O)-methyltransferase, at 372,782 to 373,237
_RS01675
Position (kb) 371
372 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 371.314 kb on - strand at 371.314 kb on - strand at 371.317 kb on - strand at 371.322 kb on + strand at 371.322 kb on + strand at 371.322 kb on + strand at 371.322 kb on + strand at 371.322 kb on + strand at 371.322 kb on + strand at 371.322 kb on + strand at 371.322 kb on + strand at 371.322 kb on + strand at 371.322 kb on + strand at 371.323 kb on - strand at 371.323 kb on - strand at 371.323 kb on - strand at 371.323 kb on - strand at 371.323 kb on - strand at 371.323 kb on - strand at 371.323 kb on - strand at 371.323 kb on - strand at 371.323 kb on - strand at 371.323 kb on - strand at 371.323 kb on - strand at 371.323 kb on - strand at 371.323 kb on - strand at 371.323 kb on - strand at 371.323 kb on - strand at 371.323 kb on - strand at 371.323 kb on - strand at 371.323 kb on - strand at 371.323 kb on - strand at 371.323 kb on - strand at 371.323 kb on - strand at 371.323 kb on - strand at 371.323 kb on - strand at 371.341 kb on - strand at 371.343 kb on + strand at 371.344 kb on - strand at 371.344 kb on - strand at 371.344 kb on - strand at 371.344 kb on - strand at 371.376 kb on + strand at 371.377 kb on - strand at 371.436 kb on + strand at 371.436 kb on + strand at 371.436 kb on + strand at 371.436 kb on + strand at 371.436 kb on + strand at 371.436 kb on + strand at 371.436 kb on + strand at 371.436 kb on + strand at 371.436 kb on + strand at 371.436 kb on + strand at 371.436 kb on + strand at 371.437 kb on - strand at 371.437 kb on - strand at 371.437 kb on - strand at 371.437 kb on - strand at 371.437 kb on - strand at 371.437 kb on - strand at 371.437 kb on - strand at 371.437 kb on - strand at 371.437 kb on - strand at 371.437 kb on - strand at 371.437 kb on - strand at 371.437 kb on - strand at 371.437 kb on - strand at 371.438 kb on + strand at 371.438 kb on + strand at 371.438 kb on + strand at 371.438 kb on + strand at 371.438 kb on + strand at 371.438 kb on + strand at 371.438 kb on + strand at 371.438 kb on + strand at 371.438 kb on + strand at 371.438 kb on + strand at 371.438 kb on + strand at 371.438 kb on + strand at 371.438 kb on + strand at 371.438 kb on + strand at 371.438 kb on + strand at 371.438 kb on + strand at 371.438 kb on + strand at 371.438 kb on + strand at 371.438 kb on + strand at 371.438 kb on + strand at 371.439 kb on - strand at 371.439 kb on - strand at 371.439 kb on - strand at 371.439 kb on - strand at 371.439 kb on - strand at 371.439 kb on - strand at 371.439 kb on - strand at 371.439 kb on - strand at 371.439 kb on - strand at 371.439 kb on - strand at 371.439 kb on - strand at 371.439 kb on - strand at 371.439 kb on - strand at 371.439 kb on - strand at 371.439 kb on - strand at 371.439 kb on - strand at 371.439 kb on - strand at 371.439 kb on - strand at 371.439 kb on - strand at 371.439 kb on - strand at 371.439 kb on - strand at 371.439 kb on - strand at 371.442 kb on + strand at 371.442 kb on + strand at 371.442 kb on + strand at 371.443 kb on - strand at 371.443 kb on - strand at 371.443 kb on - strand at 371.453 kb on + strand at 371.510 kb on + strand at 371.510 kb on + strand at 371.511 kb on - strand at 371.511 kb on - strand at 371.511 kb on - strand at 371.675 kb on - strand, within PFLU_RS01660 at 371.692 kb on + strand, within PFLU_RS01660 at 371.692 kb on + strand, within PFLU_RS01660 at 371.692 kb on + strand, within PFLU_RS01660 at 371.692 kb on + strand, within PFLU_RS01660 at 371.692 kb on + strand, within PFLU_RS01660 at 371.693 kb on - strand, within PFLU_RS01660 at 371.738 kb on + strand, within PFLU_RS01660 at 371.738 kb on + strand, within PFLU_RS01660 at 371.739 kb on - strand, within PFLU_RS01660 at 371.866 kb on + strand at 371.888 kb on + strand at 371.888 kb on + strand at 371.888 kb on + strand at 371.888 kb on + strand at 371.888 kb on + strand at 371.888 kb on + strand at 371.888 kb on + strand at 371.889 kb on - strand at 371.889 kb on - strand at 371.889 kb on - strand at 371.889 kb on - strand at 371.889 kb on - strand at 371.889 kb on - strand at 371.889 kb on - strand at 371.889 kb on - strand at 371.889 kb on - strand at 371.889 kb on - strand at 371.907 kb on + strand at 371.908 kb on - strand at 371.908 kb on - strand at 371.908 kb on - strand at 371.908 kb on - strand at 371.928 kb on + strand, within PFLU_RS01665 at 371.928 kb on + strand, within PFLU_RS01665 at 371.929 kb on - strand, within PFLU_RS01665 at 371.929 kb on - strand, within PFLU_RS01665 at 371.929 kb on - strand, within PFLU_RS01665 at 371.929 kb on - strand, within PFLU_RS01665 at 372.155 kb on + strand at 372.155 kb on + strand at 372.155 kb on + strand at 372.249 kb on + strand, within PFLU_RS01670 at 372.249 kb on + strand, within PFLU_RS01670 at 372.249 kb on + strand, within PFLU_RS01670 at 372.249 kb on + strand, within PFLU_RS01670 at 372.249 kb on + strand, within PFLU_RS01670 at 372.249 kb on + strand, within PFLU_RS01670 at 372.249 kb on + strand, within PFLU_RS01670 at 372.249 kb on + strand, within PFLU_RS01670 at 372.249 kb on + strand, within PFLU_RS01670 at 372.249 kb on + strand, within PFLU_RS01670 at 372.249 kb on + strand, within PFLU_RS01670 at 372.249 kb on + strand, within PFLU_RS01670 at 372.249 kb on + strand, within PFLU_RS01670 at 372.249 kb on + strand, within PFLU_RS01670 at 372.249 kb on + strand, within PFLU_RS01670 at 372.249 kb on + strand, within PFLU_RS01670 at 372.249 kb on + strand, within PFLU_RS01670 at 372.249 kb on + strand, within PFLU_RS01670 at 372.249 kb on + strand, within PFLU_RS01670 at 372.249 kb on + strand, within PFLU_RS01670 at 372.249 kb on + strand, within PFLU_RS01670 at 372.249 kb on + strand, within PFLU_RS01670 at 372.249 kb on + strand, within PFLU_RS01670 at 372.250 kb on - strand, within PFLU_RS01670 at 372.250 kb on - strand, within PFLU_RS01670 at 372.250 kb on - strand, within PFLU_RS01670 at 372.250 kb on - strand, within PFLU_RS01670 at 372.250 kb on - strand, within PFLU_RS01670 at 372.250 kb on - strand, within PFLU_RS01670 at 372.250 kb on - strand, within PFLU_RS01670 at 372.250 kb on - strand, within PFLU_RS01670 at 372.250 kb on - strand, within PFLU_RS01670 at 372.250 kb on - strand, within PFLU_RS01670 at 372.250 kb on - strand, within PFLU_RS01670 at 372.250 kb on - strand, within PFLU_RS01670 at 372.250 kb on - strand, within PFLU_RS01670 at 372.250 kb on - strand, within PFLU_RS01670 at 372.250 kb on - strand, within PFLU_RS01670 at 372.250 kb on - strand, within PFLU_RS01670 at 372.250 kb on - strand, within PFLU_RS01670 at 372.250 kb on - strand, within PFLU_RS01670 at 372.250 kb on - strand, within PFLU_RS01670 at 372.250 kb on - strand, within PFLU_RS01670 at 372.250 kb on - strand, within PFLU_RS01670 at 372.250 kb on - strand, within PFLU_RS01670 at 372.447 kb on - strand, within PFLU_RS01670 at 372.526 kb on - strand, within PFLU_RS01670 at 372.526 kb on - strand, within PFLU_RS01670 at 372.660 kb on + strand at 372.660 kb on + strand at 372.660 kb on + strand at 372.660 kb on + strand at 372.660 kb on + strand at 372.660 kb on + strand at 372.660 kb on + strand at 372.661 kb on - strand at 372.661 kb on - strand at 372.661 kb on - strand at 372.661 kb on - strand at 372.661 kb on - strand at 372.661 kb on - strand at 372.721 kb on + strand at 372.721 kb on + strand at 372.721 kb on + strand at 372.721 kb on + strand at 372.721 kb on + strand at 372.721 kb on + strand at 372.721 kb on + strand at 372.721 kb on + strand at 372.721 kb on + strand at 372.721 kb on + strand at 372.721 kb on + strand at 372.721 kb on + strand at 372.721 kb on + strand at 372.721 kb on + strand at 372.721 kb on + strand at 372.721 kb on + strand at 372.721 kb on + strand at 372.721 kb on + strand at 372.721 kb on + strand at 372.721 kb on + strand at 372.721 kb on + strand at 372.721 kb on + strand at 372.721 kb on + strand at 372.721 kb on + strand at 372.721 kb on + strand at 372.721 kb on + strand at 372.721 kb on + strand at 372.721 kb on + strand at 372.721 kb on + strand at 372.721 kb on + strand at 372.721 kb on + strand at 372.721 kb on + strand at 372.721 kb on + strand at 372.721 kb on + strand at 372.721 kb on + strand at 372.721 kb on + strand at 372.721 kb on + strand at 372.721 kb on + strand at 372.721 kb on + strand at 372.721 kb on + strand at 372.721 kb on + strand at 372.721 kb on + strand at 372.721 kb on + strand at 372.721 kb on + strand at 372.721 kb on + strand at 372.775 kb on + strand at 372.776 kb on - strand at 372.783 kb on + strand at 372.783 kb on + strand at 372.783 kb on + strand at 372.783 kb on + strand at 372.784 kb on - strand at 372.784 kb on - strand at 372.784 kb on - strand at 372.784 kb on - strand at 372.784 kb on - strand at 372.813 kb on + strand at 372.813 kb on + strand at 372.813 kb on + strand at 372.813 kb on + strand at 372.813 kb on + strand at 372.813 kb on + strand at 372.813 kb on + strand at 372.814 kb on - strand at 372.814 kb on - strand at 372.814 kb on - strand at 372.814 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Trehalose 5 mM (C) remove 371,314 - -1.6 371,314 - +0.6 371,317 - -2.0 371,322 + +0.6 371,322 + -1.0 371,322 + -1.0 371,322 + -2.7 371,322 + -1.2 371,322 + -0.4 371,322 + -1.0 371,322 + -1.4 371,322 + -1.9 371,322 + +0.0 371,323 - -2.9 371,323 - -1.6 371,323 - -3.5 371,323 - -2.7 371,323 - -1.7 371,323 - -1.4 371,323 - +0.0 371,323 - -2.8 371,323 - +0.0 371,323 - -2.9 371,323 - -1.8 371,323 - -0.1 371,323 - -1.1 371,323 - -2.9 371,323 - -1.5 371,323 - -3.2 371,323 - -1.7 371,323 - -1.0 371,323 - -2.3 371,323 - -2.7 371,323 - -0.6 371,323 - -1.8 371,323 - -1.4 371,341 - -0.7 371,343 + -2.1 371,344 - -0.4 371,344 - -1.3 371,344 - -1.1 371,344 - -0.8 371,376 + -1.3 371,377 - +1.4 371,436 + +0.5 371,436 + +1.1 371,436 + +0.7 371,436 + -0.9 371,436 + +0.2 371,436 + -0.4 371,436 + +0.6 371,436 + +0.6 371,436 + -0.1 371,436 + -0.7 371,436 + -1.1 371,437 - +0.7 371,437 - +0.1 371,437 - +1.2 371,437 - -0.2 371,437 - +1.4 371,437 - -0.2 371,437 - +0.9 371,437 - -1.2 371,437 - +0.5 371,437 - +0.4 371,437 - +1.1 371,437 - -1.7 371,437 - +1.0 371,438 + -0.1 371,438 + +0.9 371,438 + +0.3 371,438 + -1.0 371,438 + +0.1 371,438 + -1.2 371,438 + +0.4 371,438 + +0.1 371,438 + -1.5 371,438 + -0.4 371,438 + +0.7 371,438 + -0.3 371,438 + +0.5 371,438 + -0.6 371,438 + +1.2 371,438 + +0.0 371,438 + -1.2 371,438 + +1.0 371,438 + +0.0 371,438 + -0.1 371,439 - +0.6 371,439 - +0.6 371,439 - -1.6 371,439 - -0.7 371,439 - +1.2 371,439 - +1.6 371,439 - -0.1 371,439 - +0.2 371,439 - +1.7 371,439 - +0.1 371,439 - -0.2 371,439 - +0.6 371,439 - +0.2 371,439 - +1.5 371,439 - -0.5 371,439 - +2.2 371,439 - -0.7 371,439 - +0.3 371,439 - +1.3 371,439 - +0.1 371,439 - +0.3 371,439 - +1.6 371,442 + +0.3 371,442 + +0.6 371,442 + -0.3 371,443 - +0.0 371,443 - +2.3 371,443 - +1.0 371,453 + -0.7 371,510 + -1.0 371,510 + +0.9 371,511 - +0.3 371,511 - -1.1 371,511 - -0.1 371,675 - PFLU_RS01660 0.49 +0.6 371,692 + PFLU_RS01660 0.53 +1.0 371,692 + PFLU_RS01660 0.53 +1.0 371,692 + PFLU_RS01660 0.53 -0.1 371,692 + PFLU_RS01660 0.53 -1.0 371,692 + PFLU_RS01660 0.53 +1.0 371,693 - PFLU_RS01660 0.53 +1.8 371,738 + PFLU_RS01660 0.64 +0.6 371,738 + PFLU_RS01660 0.64 -0.2 371,739 - PFLU_RS01660 0.64 +0.2 371,866 + +1.3 371,888 + +1.2 371,888 + -0.3 371,888 + +1.1 371,888 + +0.8 371,888 + +0.8 371,888 + +0.4 371,888 + +1.4 371,889 - +0.8 371,889 - -0.4 371,889 - -0.1 371,889 - +0.4 371,889 - +0.1 371,889 - +0.7 371,889 - +0.5 371,889 - +0.9 371,889 - +0.9 371,889 - -0.3 371,907 + -0.9 371,908 - -0.4 371,908 - +0.7 371,908 - -1.0 371,908 - +0.3 371,928 + PFLU_RS01665 0.15 -0.4 371,928 + PFLU_RS01665 0.15 -0.6 371,929 - PFLU_RS01665 0.16 +0.2 371,929 - PFLU_RS01665 0.16 +0.9 371,929 - PFLU_RS01665 0.16 +0.2 371,929 - PFLU_RS01665 0.16 -0.6 372,155 + +0.3 372,155 + -0.8 372,155 + +2.9 372,249 + PFLU_RS01670 0.14 -0.5 372,249 + PFLU_RS01670 0.14 +0.4 372,249 + PFLU_RS01670 0.14 +0.6 372,249 + PFLU_RS01670 0.14 +0.1 372,249 + PFLU_RS01670 0.14 +1.6 372,249 + PFLU_RS01670 0.14 +0.2 372,249 + PFLU_RS01670 0.14 +1.8 372,249 + PFLU_RS01670 0.14 +0.4 372,249 + PFLU_RS01670 0.14 -0.0 372,249 + PFLU_RS01670 0.14 +0.6 372,249 + PFLU_RS01670 0.14 -0.6 372,249 + PFLU_RS01670 0.14 -0.4 372,249 + PFLU_RS01670 0.14 +0.8 372,249 + PFLU_RS01670 0.14 +0.9 372,249 + PFLU_RS01670 0.14 +0.4 372,249 + PFLU_RS01670 0.14 +0.7 372,249 + PFLU_RS01670 0.14 +1.1 372,249 + PFLU_RS01670 0.14 -1.7 372,249 + PFLU_RS01670 0.14 +0.9 372,249 + PFLU_RS01670 0.14 +2.6 372,249 + PFLU_RS01670 0.14 +0.6 372,249 + PFLU_RS01670 0.14 -0.6 372,249 + PFLU_RS01670 0.14 +0.9 372,250 - PFLU_RS01670 0.14 -0.7 372,250 - PFLU_RS01670 0.14 +0.4 372,250 - PFLU_RS01670 0.14 +2.3 372,250 - PFLU_RS01670 0.14 +0.9 372,250 - PFLU_RS01670 0.14 +1.0 372,250 - PFLU_RS01670 0.14 -0.0 372,250 - PFLU_RS01670 0.14 +0.6 372,250 - PFLU_RS01670 0.14 -0.4 372,250 - PFLU_RS01670 0.14 -0.4 372,250 - PFLU_RS01670 0.14 +0.6 372,250 - PFLU_RS01670 0.14 +0.1 372,250 - PFLU_RS01670 0.14 -1.0 372,250 - PFLU_RS01670 0.14 +0.9 372,250 - PFLU_RS01670 0.14 -0.4 372,250 - PFLU_RS01670 0.14 -0.4 372,250 - PFLU_RS01670 0.14 +3.6 372,250 - PFLU_RS01670 0.14 +1.0 372,250 - PFLU_RS01670 0.14 -1.5 372,250 - PFLU_RS01670 0.14 +1.6 372,250 - PFLU_RS01670 0.14 +0.9 372,250 - PFLU_RS01670 0.14 -0.7 372,250 - PFLU_RS01670 0.14 +0.6 372,447 - PFLU_RS01670 0.55 +1.0 372,526 - PFLU_RS01670 0.71 +1.0 372,526 - PFLU_RS01670 0.71 +0.8 372,660 + -0.2 372,660 + -1.1 372,660 + -0.2 372,660 + -0.0 372,660 + -0.7 372,660 + +0.3 372,660 + -2.0 372,661 - -0.1 372,661 - +0.6 372,661 - +0.3 372,661 - +0.9 372,661 - +0.1 372,661 - +0.7 372,721 + +0.0 372,721 + -2.9 372,721 + +0.3 372,721 + -0.9 372,721 + +1.6 372,721 + -0.4 372,721 + +0.6 372,721 + +0.9 372,721 + +1.0 372,721 + -0.6 372,721 + -0.5 372,721 + +1.9 372,721 + -2.1 372,721 + +1.0 372,721 + +0.0 372,721 + +1.3 372,721 + +0.6 372,721 + -1.3 372,721 + -0.3 372,721 + +0.2 372,721 + +0.9 372,721 + +1.0 372,721 + -1.0 372,721 + +1.6 372,721 + -0.4 372,721 + -1.9 372,721 + -0.9 372,721 + -0.7 372,721 + +0.5 372,721 + +0.8 372,721 + -0.3 372,721 + +0.7 372,721 + -0.0 372,721 + -1.5 372,721 + +1.3 372,721 + +0.2 372,721 + -1.1 372,721 + +0.4 372,721 + +0.8 372,721 + +0.9 372,721 + -0.3 372,721 + -0.5 372,721 + +0.3 372,721 + +0.0 372,721 + -1.2 372,775 + +0.5 372,776 - -0.7 372,783 + -0.2 372,783 + -1.0 372,783 + -1.7 372,783 + -0.8 372,784 - -0.3 372,784 - -0.2 372,784 - -0.6 372,784 - -0.3 372,784 - -0.6 372,813 + -0.5 372,813 + +0.6 372,813 + -1.1 372,813 + +0.0 372,813 + -0.7 372,813 + +0.2 372,813 + +0.6 372,814 - -0.7 372,814 - -1.7 372,814 - +0.8 372,814 - -0.2
Or see this region's nucleotide sequence