Experiment: D-Trehalose 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PFLU_RS00840 and PFLU_RS00845 overlap by 4 nucleotides PFLU_RS00845 and PFLU_RS00850 are separated by 242 nucleotides
PFLU_RS00840: PFLU_RS00840 - RNA polymerase sigma factor, at 186,028 to 186,600
_RS00840
PFLU_RS00845: PFLU_RS00845 - hypothetical protein, at 186,597 to 187,190
_RS00845
PFLU_RS00850: PFLU_RS00850 - hypothetical protein, at 187,433 to 187,654
_RS00850
Position (kb) 187
188 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 187.242 kb on + strand at 187.243 kb on - strand at 187.305 kb on + strand at 187.306 kb on - strand at 187.325 kb on + strand at 187.325 kb on + strand at 187.337 kb on + strand at 187.337 kb on + strand at 187.372 kb on + strand at 187.373 kb on - strand at 187.381 kb on - strand at 187.385 kb on + strand at 187.385 kb on + strand at 187.386 kb on - strand at 187.386 kb on - strand at 187.386 kb on - strand at 187.405 kb on - strand at 187.434 kb on + strand at 187.434 kb on + strand at 187.435 kb on - strand at 187.435 kb on - strand at 187.435 kb on - strand at 187.435 kb on - strand at 187.507 kb on + strand, within PFLU_RS00850 at 187.543 kb on + strand, within PFLU_RS00850 at 187.544 kb on - strand, within PFLU_RS00850 at 187.544 kb on - strand, within PFLU_RS00850 at 187.544 kb on - strand, within PFLU_RS00850 at 187.625 kb on + strand, within PFLU_RS00850 at 187.625 kb on + strand, within PFLU_RS00850 at 187.626 kb on - strand, within PFLU_RS00850 at 187.680 kb on + strand at 187.681 kb on - strand at 187.689 kb on + strand at 187.689 kb on + strand at 187.690 kb on - strand at 187.712 kb on + strand at 187.712 kb on + strand at 187.712 kb on + strand at 187.712 kb on + strand at 187.712 kb on + strand at 187.713 kb on - strand at 187.713 kb on - strand at 187.713 kb on - strand at 187.755 kb on + strand at 187.755 kb on + strand at 187.755 kb on + strand at 187.756 kb on - strand at 187.756 kb on - strand at 187.756 kb on - strand at 187.756 kb on - strand at 187.756 kb on - strand at 187.847 kb on + strand at 187.847 kb on + strand at 187.848 kb on - strand at 187.857 kb on + strand at 187.857 kb on + strand at 187.857 kb on + strand at 187.858 kb on - strand at 187.858 kb on - strand at 187.865 kb on + strand at 187.912 kb on - strand at 187.912 kb on - strand at 187.933 kb on + strand at 187.934 kb on - strand at 187.934 kb on - strand at 187.934 kb on - strand at 187.934 kb on - strand at 187.944 kb on + strand at 187.944 kb on + strand at 187.944 kb on + strand at 187.944 kb on + strand at 187.944 kb on + strand at 187.944 kb on + strand at 187.944 kb on + strand at 187.945 kb on - strand at 187.945 kb on - strand at 187.945 kb on - strand at 187.945 kb on - strand at 187.945 kb on - strand at 187.945 kb on - strand at 187.945 kb on - strand at 187.945 kb on - strand at 187.945 kb on - strand at 187.963 kb on - strand at 188.015 kb on + strand at 188.015 kb on + strand at 188.015 kb on + strand at 188.015 kb on + strand at 188.015 kb on + strand at 188.016 kb on - strand at 188.088 kb on + strand at 188.089 kb on - strand at 188.119 kb on + strand at 188.120 kb on - strand at 188.139 kb on + strand at 188.139 kb on + strand at 188.271 kb on + strand at 188.271 kb on + strand at 188.272 kb on - strand at 188.272 kb on - strand at 188.311 kb on + strand at 188.311 kb on + strand at 188.311 kb on + strand at 188.311 kb on + strand at 188.311 kb on + strand at 188.311 kb on + strand at 188.311 kb on + strand at 188.311 kb on + strand at 188.311 kb on + strand at 188.311 kb on + strand at 188.312 kb on - strand at 188.312 kb on - strand at 188.312 kb on - strand at 188.312 kb on - strand at 188.312 kb on - strand at 188.312 kb on - strand at 188.312 kb on - strand at 188.312 kb on - strand at 188.364 kb on + strand at 188.413 kb on + strand at 188.413 kb on + strand at 188.414 kb on - strand at 188.517 kb on + strand at 188.517 kb on + strand at 188.517 kb on + strand at 188.517 kb on + strand at 188.518 kb on - strand at 188.518 kb on - strand at 188.536 kb on + strand at 188.536 kb on + strand at 188.536 kb on + strand at 188.536 kb on + strand at 188.536 kb on + strand at 188.536 kb on + strand at 188.536 kb on + strand at 188.536 kb on + strand at 188.536 kb on + strand at 188.536 kb on + strand at 188.536 kb on + strand at 188.536 kb on + strand at 188.536 kb on + strand at 188.536 kb on + strand at 188.536 kb on + strand at 188.537 kb on - strand at 188.537 kb on - strand at 188.537 kb on - strand at 188.537 kb on - strand at 188.537 kb on - strand at 188.537 kb on - strand at 188.537 kb on - strand at 188.537 kb on - strand at 188.537 kb on - strand at 188.537 kb on - strand at 188.537 kb on - strand at 188.537 kb on - strand at 188.539 kb on + strand at 188.539 kb on + strand at 188.539 kb on + strand at 188.539 kb on + strand at 188.539 kb on + strand at 188.539 kb on + strand at 188.540 kb on - strand at 188.540 kb on - strand at 188.540 kb on - strand at 188.540 kb on - strand at 188.540 kb on - strand at 188.540 kb on - strand at 188.540 kb on - strand at 188.540 kb on - strand at 188.540 kb on - strand at 188.550 kb on + strand at 188.550 kb on + strand at 188.565 kb on + strand at 188.565 kb on + strand at 188.565 kb on + strand at 188.566 kb on - strand at 188.566 kb on - strand at 188.566 kb on - strand at 188.588 kb on + strand at 188.588 kb on + strand at 188.588 kb on + strand at 188.588 kb on + strand at 188.588 kb on + strand at 188.588 kb on + strand at 188.588 kb on + strand at 188.588 kb on + strand at 188.588 kb on + strand at 188.588 kb on + strand at 188.588 kb on + strand at 188.588 kb on + strand at 188.589 kb on - strand at 188.589 kb on - strand at 188.589 kb on - strand at 188.589 kb on - strand at 188.589 kb on - strand at 188.589 kb on - strand at 188.589 kb on - strand at 188.589 kb on - strand at 188.589 kb on - strand at 188.589 kb on - strand at 188.589 kb on - strand at 188.589 kb on - strand at 188.589 kb on - strand at 188.589 kb on - strand at 188.589 kb on - strand at 188.616 kb on - strand at 188.634 kb on - strand at 188.634 kb on - strand at 188.634 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Trehalose 5 mM (C) remove 187,242 + +0.1 187,243 - -0.6 187,305 + -0.6 187,306 - -0.1 187,325 + -0.9 187,325 + +1.2 187,337 + -0.6 187,337 + -0.0 187,372 + -0.7 187,373 - +0.3 187,381 - -2.2 187,385 + +0.5 187,385 + +1.0 187,386 - +0.9 187,386 - -0.9 187,386 - -0.1 187,405 - +0.7 187,434 + -0.9 187,434 + -0.3 187,435 - +0.4 187,435 - +0.9 187,435 - -0.4 187,435 - -0.8 187,507 + PFLU_RS00850 0.33 +0.2 187,543 + PFLU_RS00850 0.50 +0.2 187,544 - PFLU_RS00850 0.50 +2.2 187,544 - PFLU_RS00850 0.50 +0.2 187,544 - PFLU_RS00850 0.50 +1.1 187,625 + PFLU_RS00850 0.86 -0.4 187,625 + PFLU_RS00850 0.86 +1.1 187,626 - PFLU_RS00850 0.87 +1.6 187,680 + +1.2 187,681 - -0.7 187,689 + -1.1 187,689 + -0.0 187,690 - +1.2 187,712 + -1.2 187,712 + -1.7 187,712 + +1.9 187,712 + -0.9 187,712 + -0.2 187,713 - +0.8 187,713 - -1.8 187,713 - +1.6 187,755 + -0.6 187,755 + +0.8 187,755 + +0.3 187,756 - +1.2 187,756 - -0.1 187,756 - -0.9 187,756 - -0.2 187,756 - +0.8 187,847 + +0.2 187,847 + +0.2 187,848 - -1.1 187,857 + +0.5 187,857 + -2.9 187,857 + -0.3 187,858 - -0.6 187,858 - +0.9 187,865 + +0.2 187,912 - +0.5 187,912 - +2.0 187,933 + -2.6 187,934 - +0.3 187,934 - -0.3 187,934 - -0.2 187,934 - -0.6 187,944 + -0.0 187,944 + +0.1 187,944 + +0.3 187,944 + -0.4 187,944 + +0.5 187,944 + +1.0 187,944 + -0.1 187,945 - -0.0 187,945 - -0.8 187,945 - -0.8 187,945 - +0.5 187,945 - -0.3 187,945 - +0.1 187,945 - -0.3 187,945 - -0.0 187,945 - +0.2 187,963 - -1.5 188,015 + -0.9 188,015 + -0.9 188,015 + +0.1 188,015 + -0.4 188,015 + +1.0 188,016 - -0.6 188,088 + -0.5 188,089 - -0.0 188,119 + -1.2 188,120 - -0.2 188,139 + +0.3 188,139 + +0.4 188,271 + -0.5 188,271 + -1.1 188,272 - -0.1 188,272 - +0.6 188,311 + +0.1 188,311 + -2.4 188,311 + -1.7 188,311 + -0.7 188,311 + +0.3 188,311 + -0.5 188,311 + -0.1 188,311 + +0.3 188,311 + +0.2 188,311 + +0.4 188,312 - +0.8 188,312 - -0.4 188,312 - +1.0 188,312 - +0.5 188,312 - -1.2 188,312 - +0.4 188,312 - +1.1 188,312 - +0.3 188,364 + +0.6 188,413 + +0.1 188,413 + -0.0 188,414 - -0.3 188,517 + -0.5 188,517 + -1.1 188,517 + -0.8 188,517 + +0.8 188,518 - +0.4 188,518 - +0.8 188,536 + +1.0 188,536 + -0.9 188,536 + +0.5 188,536 + +0.6 188,536 + -0.4 188,536 + +1.6 188,536 + -0.4 188,536 + -0.6 188,536 + +0.2 188,536 + +0.2 188,536 + +0.6 188,536 + +0.6 188,536 + +0.1 188,536 + -0.4 188,536 + -1.1 188,537 - -0.2 188,537 - -1.8 188,537 - -0.1 188,537 - +0.4 188,537 - +0.6 188,537 - -0.6 188,537 - +0.9 188,537 - +1.3 188,537 - -1.9 188,537 - +0.3 188,537 - -0.3 188,537 - -0.4 188,539 + -0.5 188,539 + +0.2 188,539 + -1.9 188,539 + -1.4 188,539 + +0.6 188,539 + -0.1 188,540 - +1.0 188,540 - +0.3 188,540 - -0.1 188,540 - -0.4 188,540 - -0.0 188,540 - +1.1 188,540 - +0.1 188,540 - -0.9 188,540 - -0.6 188,550 + -1.0 188,550 + -0.2 188,565 + +0.6 188,565 + -0.2 188,565 + +0.3 188,566 - +1.2 188,566 - +0.1 188,566 - +0.9 188,588 + +0.4 188,588 + -0.5 188,588 + +1.2 188,588 + +0.2 188,588 + +1.4 188,588 + -0.6 188,588 + -0.1 188,588 + +0.5 188,588 + +0.2 188,588 + +0.3 188,588 + +0.2 188,588 + -0.5 188,589 - +0.2 188,589 - +0.2 188,589 - +0.8 188,589 - -0.8 188,589 - -0.9 188,589 - -2.4 188,589 - +0.2 188,589 - -2.0 188,589 - +0.1 188,589 - +0.5 188,589 - +0.6 188,589 - -0.5 188,589 - -0.7 188,589 - +0.6 188,589 - -0.7 188,616 - +0.2 188,634 - -0.5 188,634 - -1.5 188,634 - -0.5
Or see this region's nucleotide sequence