Experiment: D-Trehalose 5 mM (C)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt PFLU_RS00385 and PFLU_RS00390 are separated by 56 nucleotides PFLU_RS00390 and PFLU_RS00395 are separated by 74 nucleotides
PFLU_RS00385: PFLU_RS00385 - homoserine kinase, at 76,789 to 77,742
_RS00385
PFLU_RS00390: PFLU_RS00390 - DUF2782 domain-containing protein, at 77,799 to 78,089
_RS00390
PFLU_RS00395: PFLU_RS00395 - DNA polymerase I, at 78,164 to 80,941
_RS00395
Position (kb) 77
78
79 Strain fitness (log2 ratio) -1
0
1
2 at 76.804 kb on + strand at 76.804 kb on + strand at 76.804 kb on + strand at 76.804 kb on + strand at 76.804 kb on + strand at 76.804 kb on + strand at 76.805 kb on - strand at 76.805 kb on - strand at 76.805 kb on - strand at 76.805 kb on - strand at 77.081 kb on + strand, within PFLU_RS00385 at 77.108 kb on + strand, within PFLU_RS00385 at 77.325 kb on + strand, within PFLU_RS00385 at 77.325 kb on + strand, within PFLU_RS00385 at 77.326 kb on - strand, within PFLU_RS00385 at 77.746 kb on + strand at 77.759 kb on - strand at 77.792 kb on + strand at 77.793 kb on - strand at 77.793 kb on - strand at 77.793 kb on - strand at 77.838 kb on - strand, within PFLU_RS00390 at 77.887 kb on - strand, within PFLU_RS00390 at 77.896 kb on + strand, within PFLU_RS00390 at 77.896 kb on + strand, within PFLU_RS00390 at 77.896 kb on + strand, within PFLU_RS00390 at 77.896 kb on + strand, within PFLU_RS00390 at 77.896 kb on + strand, within PFLU_RS00390 at 77.897 kb on - strand, within PFLU_RS00390 at 77.897 kb on - strand, within PFLU_RS00390 at 77.933 kb on - strand, within PFLU_RS00390 at 77.953 kb on + strand, within PFLU_RS00390 at 77.990 kb on + strand, within PFLU_RS00390 at 77.990 kb on + strand, within PFLU_RS00390 at 77.991 kb on - strand, within PFLU_RS00390 at 77.991 kb on - strand, within PFLU_RS00390 at 78.083 kb on + strand at 78.083 kb on + strand at 78.083 kb on + strand at 78.083 kb on + strand at 78.083 kb on + strand at 78.083 kb on + strand at 78.083 kb on + strand at 78.083 kb on + strand at 78.083 kb on + strand at 78.083 kb on + strand at 78.083 kb on + strand at 78.083 kb on + strand at 78.083 kb on + strand at 78.083 kb on + strand at 78.083 kb on + strand at 78.083 kb on + strand at 78.083 kb on + strand at 78.083 kb on + strand at 78.083 kb on + strand at 78.083 kb on + strand at 78.083 kb on + strand at 78.083 kb on + strand at 78.084 kb on - strand at 78.084 kb on - strand at 78.084 kb on - strand at 78.084 kb on - strand at 78.084 kb on - strand at 78.084 kb on - strand at 78.084 kb on - strand at 78.084 kb on - strand at 78.084 kb on - strand at 78.084 kb on - strand at 78.084 kb on - strand at 78.084 kb on - strand at 78.084 kb on - strand at 78.084 kb on - strand at 78.084 kb on - strand at 78.084 kb on - strand at 78.084 kb on - strand at 78.092 kb on + strand at 78.093 kb on - strand at 78.093 kb on - strand at 78.124 kb on + strand at 78.124 kb on + strand at 78.125 kb on - strand at 78.125 kb on - strand at 78.125 kb on - strand at 78.129 kb on + strand at 78.130 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Trehalose 5 mM (C) remove 76,804 + +1.6 76,804 + +0.6 76,804 + -0.4 76,804 + +1.6 76,804 + -0.7 76,804 + +1.6 76,805 - +0.2 76,805 - +0.4 76,805 - +0.4 76,805 - -1.0 77,081 + PFLU_RS00385 0.31 +1.6 77,108 + PFLU_RS00385 0.33 +0.6 77,325 + PFLU_RS00385 0.56 +0.6 77,325 + PFLU_RS00385 0.56 +1.6 77,326 - PFLU_RS00385 0.56 +1.6 77,746 + +1.6 77,759 - -0.5 77,792 + -0.7 77,793 - +0.3 77,793 - -0.2 77,793 - -1.5 77,838 - PFLU_RS00390 0.13 -0.1 77,887 - PFLU_RS00390 0.30 +1.4 77,896 + PFLU_RS00390 0.33 -0.9 77,896 + PFLU_RS00390 0.33 +1.0 77,896 + PFLU_RS00390 0.33 +1.3 77,896 + PFLU_RS00390 0.33 -0.7 77,896 + PFLU_RS00390 0.33 +1.2 77,897 - PFLU_RS00390 0.34 +1.3 77,897 - PFLU_RS00390 0.34 -0.4 77,933 - PFLU_RS00390 0.46 +0.9 77,953 + PFLU_RS00390 0.53 +0.1 77,990 + PFLU_RS00390 0.66 +1.0 77,990 + PFLU_RS00390 0.66 +1.1 77,991 - PFLU_RS00390 0.66 +1.6 77,991 - PFLU_RS00390 0.66 +0.5 78,083 + -0.9 78,083 + +1.8 78,083 + +0.2 78,083 + +1.6 78,083 + -0.4 78,083 + +1.2 78,083 + +1.0 78,083 + +0.2 78,083 + +0.5 78,083 + -0.6 78,083 + +0.9 78,083 + +1.4 78,083 + +0.6 78,083 + +0.5 78,083 + +0.1 78,083 + +0.6 78,083 + +0.6 78,083 + +1.3 78,083 + +0.1 78,083 + +1.3 78,083 + +1.5 78,083 + +0.5 78,084 - +1.4 78,084 - +0.5 78,084 - +1.0 78,084 - +1.0 78,084 - +1.6 78,084 - +2.0 78,084 - +0.8 78,084 - +1.3 78,084 - -0.2 78,084 - +1.4 78,084 - +0.5 78,084 - +0.1 78,084 - -0.4 78,084 - +1.2 78,084 - +0.5 78,084 - +0.6 78,084 - +0.4 78,092 + +1.1 78,093 - +1.3 78,093 - +0.7 78,124 + +1.5 78,124 + +1.3 78,125 - -1.2 78,125 - +0.5 78,125 - +0.3 78,129 + +1.3 78,130 - -1.3
Or see this region's nucleotide sequence