Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS00065

Experiment: D-Trehalose 5 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Trehalose 5 mM (C)
15,148	-				-0.4
15,220	+				-0.1
15,220	+				-1.9
15,220	+				-1.6
15,220	+				-0.4
15,220	+				-0.0
15,220	+				+0.1
15,220	+				-0.1
15,220	+				-0.2
15,220	+				+0.3
15,221	-				-1.3
15,221	-				+0.6
15,221	-				+0.5
15,221	-				+0.5
15,221	-				+0.3
15,221	-				-0.7
15,221	-				+2.2
15,229	+				-0.4
15,229	+				-0.4
15,229	+				-1.0
15,229	+				-0.3
15,229	+				-0.4
15,229	+				-1.7
15,230	-				+0.5
15,230	-				+0.2
15,349	+		PFLU_RS00060	0.30	-0.9
15,440	+		PFLU_RS00060	0.46	+0.3
15,441	-		PFLU_RS00060	0.46	-1.4
15,441	-		PFLU_RS00060	0.46	-0.8
15,441	-		PFLU_RS00060	0.46	-0.4
15,633	+		PFLU_RS00060	0.80	+0.3
15,633	+		PFLU_RS00060	0.80	-0.0
15,633	+		PFLU_RS00060	0.80	+0.3
15,634	-		PFLU_RS00060	0.81	+0.8
15,740	-				-0.8
15,812	+				+1.1
16,174	+		PFLU_RS00065	0.44	+1.1
16,174	+		PFLU_RS00065	0.44	+2.6
16,174	+		PFLU_RS00065	0.44	+1.1
16,174	+		PFLU_RS00065	0.44	+1.1
16,174	+		PFLU_RS00065	0.44	+0.1
16,174	+		PFLU_RS00065	0.44	+0.1
16,174	+		PFLU_RS00065	0.44	+0.1
16,174	+		PFLU_RS00065	0.44	+0.9
16,174	+		PFLU_RS00065	0.44	+1.3
16,174	+		PFLU_RS00065	0.44	+0.6
16,174	+		PFLU_RS00065	0.44	+1.6
16,174	+		PFLU_RS00065	0.44	+0.3
16,174	+		PFLU_RS00065	0.44	+0.6
16,174	+		PFLU_RS00065	0.44	+1.6
16,174	+		PFLU_RS00065	0.44	+0.4
16,175	-		PFLU_RS00065	0.44	+2.4
16,175	-		PFLU_RS00065	0.44	-1.4
16,175	-		PFLU_RS00065	0.44	-0.4
16,175	-		PFLU_RS00065	0.44	+2.2
16,175	-		PFLU_RS00065	0.44	+0.4
16,175	-		PFLU_RS00065	0.44	+1.1
16,175	-		PFLU_RS00065	0.44	+2.0
16,175	-		PFLU_RS00065	0.44	+0.6
16,175	-		PFLU_RS00065	0.44	+1.2
16,175	-		PFLU_RS00065	0.44	-0.4
16,410	+		PFLU_RS00065	0.70	+1.1
16,410	+		PFLU_RS00065	0.70	+2.2
16,410	+		PFLU_RS00065	0.70	+3.6
16,410	+		PFLU_RS00065	0.70	-0.9
16,410	+		PFLU_RS00065	0.70	+0.9
16,410	+		PFLU_RS00065	0.70	+1.1
16,410	+		PFLU_RS00065	0.70	+0.6
16,411	-		PFLU_RS00065	0.71	+0.6
16,411	-		PFLU_RS00065	0.71	+1.6
16,411	-		PFLU_RS00065	0.71	+1.6
16,411	-		PFLU_RS00065	0.71	+1.6
16,411	-		PFLU_RS00065	0.71	+0.6
16,411	-		PFLU_RS00065	0.71	+2.2
16,498	+		PFLU_RS00065	0.80	+0.5
16,499	-		PFLU_RS00065	0.81	+1.1
16,534	+		PFLU_RS00065	0.84	+0.6
16,534	+		PFLU_RS00065	0.84	+2.4
16,534	+		PFLU_RS00065	0.84	+0.6
16,534	+		PFLU_RS00065	0.84	+1.2
16,534	+		PFLU_RS00065	0.84	+1.6
16,534	+		PFLU_RS00065	0.84	-0.7
16,534	+		PFLU_RS00065	0.84	+1.4
16,534	+		PFLU_RS00065	0.84	+1.6
16,534	+		PFLU_RS00065	0.84	+0.3
16,534	+		PFLU_RS00065	0.84	-0.2
16,534	+		PFLU_RS00065	0.84	-0.4
16,534	+		PFLU_RS00065	0.84	+0.3
16,534	+		PFLU_RS00065	0.84	+4.0
16,534	+		PFLU_RS00065	0.84	+1.6
16,534	+		PFLU_RS00065	0.84	-0.7
16,534	+		PFLU_RS00065	0.84	-0.4
16,534	+		PFLU_RS00065	0.84	+1.1
16,534	+		PFLU_RS00065	0.84	+0.1
16,534	+		PFLU_RS00065	0.84	+0.6
16,534	+		PFLU_RS00065	0.84	+2.2
16,534	+		PFLU_RS00065	0.84	-0.2
16,534	+		PFLU_RS00065	0.84	+2.6
16,534	+		PFLU_RS00065	0.84	+3.6
16,534	+		PFLU_RS00065	0.84	+4.8
16,534	+		PFLU_RS00065	0.84	+0.1
16,534	+		PFLU_RS00065	0.84	+0.6
16,534	+		PFLU_RS00065	0.84	+2.1
16,534	+		PFLU_RS00065	0.84	+4.0
16,534	+		PFLU_RS00065	0.84	+2.2
16,534	+		PFLU_RS00065	0.84	-0.4
16,534	+		PFLU_RS00065	0.84	+0.1
16,534	+		PFLU_RS00065	0.84	+1.1
16,534	+		PFLU_RS00065	0.84	+3.0
16,535	-		PFLU_RS00065	0.85	+0.5
16,535	-		PFLU_RS00065	0.85	+1.6
16,535	-		PFLU_RS00065	0.85	+1.2
16,535	-		PFLU_RS00065	0.85	+2.2
16,535	-		PFLU_RS00065	0.85	+2.2
16,535	-		PFLU_RS00065	0.85	+1.6
16,535	-		PFLU_RS00065	0.85	+1.1
16,535	-		PFLU_RS00065	0.85	+0.1
16,535	-		PFLU_RS00065	0.85	-0.4
16,535	-		PFLU_RS00065	0.85	+1.1
16,535	-		PFLU_RS00065	0.85	+0.6
16,535	-		PFLU_RS00065	0.85	-0.4
16,535	-		PFLU_RS00065	0.85	+1.6
16,535	-		PFLU_RS00065	0.85	+0.3
16,535	-		PFLU_RS00065	0.85	+3.2
16,535	-		PFLU_RS00065	0.85	+1.1
16,535	-		PFLU_RS00065	0.85	-0.4
16,535	-		PFLU_RS00065	0.85	+3.2
16,535	-		PFLU_RS00065	0.85	+1.6
16,535	-		PFLU_RS00065	0.85	+0.1
16,535	-		PFLU_RS00065	0.85	+1.6
16,535	-		PFLU_RS00065	0.85	+0.6
16,535	-		PFLU_RS00065	0.85	+1.6
16,535	-		PFLU_RS00065	0.85	+2.5
16,535	-		PFLU_RS00065	0.85	+0.9
16,535	-		PFLU_RS00065	0.85	+2.2
16,588	+				-0.1
16,588	+				+1.6
16,588	+				+0.6
16,588	+				+0.1
16,589	-				+0.2
16,589	-				+0.6
16,589	-				-0.4
16,589	-				-0.1
16,612	+				+2.6
16,612	+				+0.6
16,612	+				+3.2
16,612	+				+0.3
16,612	+				+1.6
16,612	+				+0.1
16,612	+				+1.1
16,612	+				+2.6
16,612	+				+3.8
16,612	+				+0.6
16,612	+				+2.1
16,613	-				+0.4
16,613	-				-0.4
16,613	-				+1.6
16,613	-				+1.6
16,613	-				+1.1
16,613	-				+2.2
16,613	-				+1.6
16,613	-				-0.7
16,613	-				-0.7
16,613	-				+0.1
16,666	+				-0.0
16,666	+				+0.3
16,667	-				-0.0
16,695	-				+0.4
16,745	+				+0.5
16,745	+				+0.3
16,745	+				+0.2
16,745	+				+1.2
16,745	+				-0.1
16,745	+				+0.8
16,745	+				+0.9
16,745	+				+0.2
16,746	-				+0.8
16,746	-				+0.5
16,746	-				+0.8
16,746	-				-0.4
16,746	-				-0.2
16,746	-				-0.9
16,746	-				-0.2
16,746	-				-0.2
16,746	-				-0.5
16,746	-				+0.5
16,747	+				+0.6
16,747	+				+0.2
16,747	+				-1.6
16,747	+				-0.6
16,747	+				-0.5
16,747	+				-0.0
16,747	+				-0.2
16,747	+				+0.6
16,747	+				-0.2
16,747	+				-0.5
16,747	+				+0.4
16,747	+				-0.2
16,747	+				+0.2
16,747	+				+0.6
16,747	+				+1.4
16,747	+				+0.6
16,747	+				+0.3
16,747	+				-0.5
16,747	+				+2.4
16,747	+				-1.0
16,748	-				+0.2
16,748	-				-0.9
16,748	-				+0.9
16,748	-				-0.3
16,748	-				+0.4
16,748	-				-1.3
16,748	-				+0.2
16,748	-				+0.6
16,748	-				+0.1
16,748	-				+0.1
16,748	-				-0.9
16,748	-				+2.0
16,748	-				+0.5
16,748	-				+0.0
16,748	-				-1.4
16,748	-				-0.0
16,748	-				+1.1
16,748	-				-0.7
16,748	-				+0.8
16,748	-				+0.7
16,748	-				+0.7
16,748	-				+1.6
16,748	-				+0.6
16,748	-				+1.2
16,748	-				+0.0
16,748	-				+0.1
16,748	-				+0.3
16,748	-				-0.9
16,748	-				+1.1
16,972	+		PFLU_RS00070	0.53	-0.1
16,973	-		PFLU_RS00070	0.54	-0.9
17,041	+		PFLU_RS00070	0.75	+0.1
17,042	-		PFLU_RS00070	0.76	+0.6
17,042	-		PFLU_RS00070	0.76	+0.4
17,119	+				+1.1
17,119	+				-0.7
17,119	+				-2.0
17,119	+				-0.6
17,119	+				+0.1
17,119	+				-0.5
17,119	+				+0.1
17,119	+				-1.0
17,119	+				+0.1
17,120	-				+0.3
17,120	-				-2.6
17,120	-				+0.6
17,120	-				-0.6
17,120	-				-1.4
17,120	-				+1.1
17,120	-				+0.0
17,120	-				-0.5
17,120	-				+0.9
17,120	-				-0.7
17,120	-				+0.3
17,120	-				-1.2
17,198	-				-1.2
17,249	+				+0.2
17,249	+				+0.6
17,250	-				+0.5
17,250	-				+0.6
17,259	+				+0.6
17,260	-				-0.6
17,260	-				+1.3
17,306	-				-0.7
17,315	-				+0.6
17,423	+		PFLU_RS00075	0.12	-0.9
17,549	+		PFLU_RS00075	0.21	+0.5
17,549	+		PFLU_RS00075	0.21	+1.4
17,549	+		PFLU_RS00075	0.21	-1.1
17,549	+		PFLU_RS00075	0.21	-0.2
17,549	+		PFLU_RS00075	0.21	-0.3
17,549	+		PFLU_RS00075	0.21	-0.7
17,549	+		PFLU_RS00075	0.21	-0.2
17,549	+		PFLU_RS00075	0.21	+0.1
17,550	-		PFLU_RS00075	0.21	+0.9
17,550	-		PFLU_RS00075	0.21	+1.5
17,550	-		PFLU_RS00075	0.21	-0.8
17,550	-		PFLU_RS00075	0.21	-1.0
17,550	-		PFLU_RS00075	0.21	+1.1
17,550	-		PFLU_RS00075	0.21	-0.4
17,631	+		PFLU_RS00075	0.27	+0.6
17,631	+		PFLU_RS00075	0.27	-1.4
17,631	+		PFLU_RS00075	0.27	+0.8
17,632	-		PFLU_RS00075	0.27	+0.1
17,632	-		PFLU_RS00075	0.27	-0.7
17,632	-		PFLU_RS00075	0.27	-0.4
17,632	-		PFLU_RS00075	0.27	+2.2
17,632	-		PFLU_RS00075	0.27	-0.9
17,632	-		PFLU_RS00075	0.27	-0.4