Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS25755

Experiment: Quinic Acid 10 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Quinic Acid 10 mM (C)
5,749,564	+				+0.4
5,749,564	+				+0.5
5,749,564	+				+0.1
5,749,565	-				+1.1
5,749,565	-				+1.0
5,749,565	-				+0.4
5,749,565	-				-0.3
5,749,565	-				-0.9
5,749,613	+				-0.5
5,749,613	+				-0.2
5,749,613	+				+0.1
5,749,613	+				+0.3
5,749,613	+				-0.5
5,749,613	+				-0.3
5,749,613	+				+0.8
5,749,613	+				+1.0
5,749,613	+				+0.7
5,749,614	-				+0.8
5,749,614	-				-0.3
5,749,614	-				+0.8
5,749,614	-				-1.2
5,749,614	-				-0.3
5,749,614	-				-0.6
5,749,614	-				+2.8
5,749,614	-				+2.0
5,749,615	+				-1.0
5,749,615	+				-0.7
5,749,615	+				+1.0
5,749,615	+				-0.8
5,749,615	+				-0.4
5,749,615	+				-1.6
5,749,616	-				-0.4
5,749,616	-				-2.3
5,749,616	-				-0.5
5,749,616	-				-0.2
5,749,616	-				-1.4
5,749,616	-				+1.4
5,749,616	-				+1.4
5,749,665	+				-0.1
5,749,665	+				-1.1
5,749,665	+				+0.5
5,749,665	+				-0.2
5,749,665	+				-0.5
5,749,665	+				+1.2
5,749,665	+				+1.2
5,749,665	+				-0.8
5,749,665	+				-0.9
5,749,665	+				+1.6
5,749,665	+				+1.5
5,749,665	+				+2.8
5,749,665	+				+1.4
5,749,665	+				-0.0
5,749,666	-				+1.0
5,749,666	-				+1.6
5,749,666	-				+0.5
5,749,666	-				-1.3
5,749,666	-				-0.5
5,749,666	-				-0.3
5,749,666	-				+0.2
5,749,666	-				-0.5
5,749,666	-				+0.2
5,749,666	-				-1.1
5,749,666	-				-0.9
5,749,666	-				-1.1
5,749,666	-				+0.2
5,749,666	-				-0.2
5,749,667	+				-0.0
5,749,667	+				-1.0
5,749,667	+				+0.1
5,749,667	+				+0.7
5,749,667	+				-0.2
5,749,667	+				-0.9
5,749,667	+				+1.0
5,749,667	+				+0.6
5,749,667	+				+1.0
5,749,667	+				+0.8
5,749,667	+				-1.6
5,749,667	+				-0.5
5,749,667	+				-1.0
5,749,667	+				-0.3
5,749,667	+				+0.1
5,749,667	+				-0.6
5,749,667	+				-0.0
5,749,667	+				+0.7
5,749,667	+				+0.3
5,749,667	+				+1.3
5,749,667	+				+1.8
5,749,667	+				-1.0
5,749,667	+				+0.2
5,749,667	+				-1.0
5,749,668	-				-0.1
5,749,668	-				-1.0
5,749,668	-				-0.2
5,749,668	-				-1.2
5,749,668	-				-0.5
5,749,668	-				+0.3
5,749,668	-				+0.1
5,749,668	-				+1.0
5,749,668	-				-0.2
5,749,668	-				-0.5
5,749,668	-				-0.8
5,749,668	-				+0.5
5,749,668	-				-0.3
5,749,668	-				-1.7
5,749,668	-				+1.6
5,749,668	-				+0.2
5,749,668	-				+0.4
5,749,668	-				-0.6
5,749,668	-				-0.5
5,749,668	-				+0.7
5,749,668	-				+0.3
5,749,668	-				+0.7
5,749,668	-				+0.7
5,749,668	-				+0.6
5,749,668	-				+0.5
5,749,668	-				-0.1
5,749,668	-				-0.7
5,749,668	-				+0.8
5,749,696	+				+0.3
5,749,696	+				+1.8
5,749,697	-				+0.0
5,749,698	+				+0.3
5,749,699	-				+0.0
5,749,699	-				+0.8
5,749,769	+				-2.7
5,749,830	+				-0.2
5,749,830	+				+0.2
5,749,830	+				-0.2
5,749,830	+				-0.8
5,749,830	+				-1.6
5,749,830	+				+0.3
5,749,830	+				+0.8
5,749,831	-				-0.2
5,749,831	-				-0.5
5,749,831	-				-0.8
5,749,831	-				+1.8
5,749,831	-				+1.8
5,749,957	-		PFLU_RS25750	0.25	-0.5
5,749,957	-		PFLU_RS25750	0.25	+0.2
5,749,957	-		PFLU_RS25750	0.25	-1.0
5,750,205	+		PFLU_RS25750	0.56	-0.5
5,750,206	-		PFLU_RS25750	0.56	+0.8
5,750,206	-		PFLU_RS25750	0.56	+1.3
5,750,206	-		PFLU_RS25750	0.56	-0.2
5,750,206	-		PFLU_RS25750	0.56	+0.0
5,750,212	+		PFLU_RS25750	0.57	-0.0
5,750,213	-		PFLU_RS25750	0.57	-0.2
5,750,213	-		PFLU_RS25750	0.57	-0.2
5,750,213	-		PFLU_RS25750	0.57	+0.2
5,750,213	-		PFLU_RS25750	0.57	-2.0
5,750,213	-		PFLU_RS25750	0.57	-0.2
5,750,213	-		PFLU_RS25750	0.57	-0.3
5,750,213	-		PFLU_RS25750	0.57	+1.1
5,750,213	-		PFLU_RS25750	0.57	-1.6
5,750,213	-		PFLU_RS25750	0.57	-1.3
5,750,392	+		PFLU_RS25750	0.79	-1.3
5,750,392	+		PFLU_RS25750	0.79	-0.0
5,750,393	-		PFLU_RS25750	0.79	-0.8
5,750,393	-		PFLU_RS25750	0.79	-0.8
5,750,393	-		PFLU_RS25750	0.79	+0.2
5,750,393	-		PFLU_RS25750	0.79	-1.8
5,750,393	-		PFLU_RS25750	0.79	-1.6
5,750,393	-		PFLU_RS25750	0.79	+0.2
5,750,393	-		PFLU_RS25750	0.79	-1.0
5,750,499	+				+0.4
5,750,499	+				-0.8
5,750,500	-				-1.5
5,750,500	-				-0.2
5,750,500	-				-1.5
5,750,566	-				-0.5
5,750,566	-				-1.0
5,750,765	+		PFLU_RS25755	0.25	+0.3
5,750,765	+		PFLU_RS25755	0.25	-0.2
5,750,765	+		PFLU_RS25755	0.25	-0.2
5,750,766	-		PFLU_RS25755	0.25	+0.3
5,750,849	+		PFLU_RS25755	0.35	-0.2
5,750,849	+		PFLU_RS25755	0.35	-0.2
5,750,850	-		PFLU_RS25755	0.35	+0.8
5,751,128	+		PFLU_RS25755	0.67	-0.2
5,751,128	+		PFLU_RS25755	0.67	-0.2
5,751,129	-		PFLU_RS25755	0.67	+1.8
5,751,129	-		PFLU_RS25755	0.67	-0.2
5,751,129	-		PFLU_RS25755	0.67	+0.3
5,751,278	+		PFLU_RS25755	0.85	-0.2
5,751,278	+		PFLU_RS25755	0.85	+0.3
5,751,279	-		PFLU_RS25755	0.85	+1.8
5,751,279	-		PFLU_RS25755	0.85	+0.8
5,751,279	-		PFLU_RS25755	0.85	+0.8
5,751,289	-		PFLU_RS25755	0.86	+0.8
5,751,289	-		PFLU_RS25755	0.86	+0.8
5,751,289	-		PFLU_RS25755	0.86	-0.5
5,751,356	+				+1.8
5,751,357	-				+0.8
5,751,357	-				+0.8
5,751,357	-				+1.8
5,751,426	+				-0.9
5,751,427	-				+1.8
5,751,439	+				+1.4
5,751,441	+				+0.7
5,751,441	+				-0.7
5,751,480	+				+1.8
5,751,480	+				+0.3
5,751,480	+				+0.2
5,751,481	-				+0.1
5,751,481	-				+0.8
5,751,481	-				+0.1
5,751,481	-				+0.3
5,751,481	-				+0.5
5,751,491	+				-0.0
5,751,491	+				+0.8
5,751,491	+				+1.0
5,751,491	+				-0.2
5,751,491	+				+0.7
5,751,492	-				+1.8
5,751,497	+				-0.8
5,751,497	+				+0.0
5,751,497	+				+0.4
5,751,497	+				+0.8
5,751,497	+				-0.2
5,751,498	-				+0.8
5,751,498	-				+1.7
5,751,498	-				-1.9
5,751,498	-				+0.7
5,751,502	+				-1.0
5,751,502	+				-0.6
5,751,502	+				-0.1
5,751,502	+				+0.6
5,751,502	+				+0.1
5,751,502	+				-0.2
5,751,502	+				-1.8
5,751,502	+				+0.8
5,751,503	-				-0.2
5,751,503	-				-0.3
5,751,503	-				+0.8
5,751,516	+				+0.8
5,751,517	-				-0.7
5,751,517	-				+1.4
5,751,517	-				-0.6
5,751,549	+				+0.0
5,751,549	+				+0.1
5,751,549	+				+1.3
5,751,550	-				-0.5
5,751,550	-				-0.3
5,751,550	-				-0.5
5,751,572	+				-0.5
5,751,572	+				+0.6
5,751,583	+				+1.0
5,751,583	+				+0.1
5,751,583	+				+1.8
5,751,583	+				+1.3
5,751,584	-				+0.8
5,751,584	-				-1.0
5,751,598	+				+0.0
5,751,598	+				+0.3
5,751,598	+				+0.8
5,751,601	+				+0.1
5,751,602	-				+0.8
5,751,602	-				+1.0
5,751,602	-				+0.3
5,751,626	+				+0.8
5,751,626	+				-0.5
5,751,626	+				+1.8
5,751,627	-				+1.8
5,751,627	-				-0.5
5,751,627	-				-0.2
5,751,629	+				-0.2
5,751,629	+				+0.3
5,751,629	+				-0.2
5,751,630	-				-0.2
5,751,630	-				-0.2
5,751,875	+		PFLU_RS25760	0.15	+0.8
5,751,876	-		PFLU_RS25760	0.15	-0.7
5,751,876	-		PFLU_RS25760	0.15	+1.3
5,751,876	-		PFLU_RS25760	0.15	+1.8
5,751,876	-		PFLU_RS25760	0.15	+1.1
5,751,876	-		PFLU_RS25760	0.15	-0.2
5,752,053	-		PFLU_RS25760	0.26	+0.3
5,752,142	+		PFLU_RS25760	0.31	+0.3
5,752,143	-		PFLU_RS25760	0.31	+1.8
5,752,143	-		PFLU_RS25760	0.31	+0.8
5,752,150	+		PFLU_RS25760	0.32	-0.2
5,752,169	+		PFLU_RS25760	0.33	+0.0
5,752,169	+		PFLU_RS25760	0.33	+1.8
5,752,169	+		PFLU_RS25760	0.33	-0.5
5,752,169	+		PFLU_RS25760	0.33	+0.8
5,752,170	-		PFLU_RS25760	0.33	+1.8
5,752,170	-		PFLU_RS25760	0.33	+0.8
5,752,241	-		PFLU_RS25760	0.37	+1.8
5,752,340	+		PFLU_RS25760	0.43	+0.8
5,752,340	+		PFLU_RS25760	0.43	+1.8
5,752,340	+		PFLU_RS25760	0.43	+1.8
5,752,340	+		PFLU_RS25760	0.43	-0.5
5,752,340	+		PFLU_RS25760	0.43	+0.3
5,752,340	+		PFLU_RS25760	0.43	+0.8
5,752,340	+		PFLU_RS25760	0.43	+2.8
5,752,341	-		PFLU_RS25760	0.43	+0.8
5,752,341	-		PFLU_RS25760	0.43	+1.8
5,752,341	-		PFLU_RS25760	0.43	+0.3
5,752,341	-		PFLU_RS25760	0.43	+0.4
5,752,341	-		PFLU_RS25760	0.43	+0.8
5,752,341	-		PFLU_RS25760	0.43	+0.8
5,752,359	+		PFLU_RS25760	0.44	+1.8