Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS22520

Experiment: Quinic Acid 10 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Quinic Acid 10 mM (C)
5,066,859	+		PFLU_RS22515	0.40	-0.1
5,066,859	+		PFLU_RS22515	0.40	-0.1
5,066,859	+		PFLU_RS22515	0.40	-0.5
5,066,860	-		PFLU_RS22515	0.40	+0.9
5,066,860	-		PFLU_RS22515	0.40	+1.0
5,066,860	-		PFLU_RS22515	0.40	+0.7
5,066,860	-		PFLU_RS22515	0.40	-1.2
5,066,860	-		PFLU_RS22515	0.40	-1.9
5,066,937	+		PFLU_RS22515	0.46	-0.4
5,066,937	+		PFLU_RS22515	0.46	+0.4
5,066,937	+		PFLU_RS22515	0.46	-0.9
5,066,937	+		PFLU_RS22515	0.46	-1.5
5,066,937	+		PFLU_RS22515	0.46	-0.1
5,066,938	-		PFLU_RS22515	0.46	+0.1
5,066,938	-		PFLU_RS22515	0.46	+0.2
5,066,938	-		PFLU_RS22515	0.46	+0.1
5,066,938	-		PFLU_RS22515	0.46	-0.5
5,066,938	-		PFLU_RS22515	0.46	+0.5
5,066,938	-		PFLU_RS22515	0.46	-1.3
5,066,938	-		PFLU_RS22515	0.46	-1.1
5,066,938	-		PFLU_RS22515	0.46	-0.8
5,066,938	-		PFLU_RS22515	0.46	+0.4
5,066,938	-		PFLU_RS22515	0.46	+0.5
5,066,938	-		PFLU_RS22515	0.46	+0.5
5,066,940	+		PFLU_RS22515	0.46	+1.1
5,066,940	+		PFLU_RS22515	0.46	-0.3
5,066,940	+		PFLU_RS22515	0.46	+0.7
5,066,941	-		PFLU_RS22515	0.46	+1.3
5,066,941	-		PFLU_RS22515	0.46	-0.7
5,066,941	-		PFLU_RS22515	0.46	+1.5
5,067,027	+		PFLU_RS22515	0.52	-0.2
5,067,027	+		PFLU_RS22515	0.52	+0.7
5,067,027	+		PFLU_RS22515	0.52	+0.9
5,067,027	+		PFLU_RS22515	0.52	-1.4
5,067,027	+		PFLU_RS22515	0.52	+0.5
5,067,027	+		PFLU_RS22515	0.52	+0.1
5,067,027	+		PFLU_RS22515	0.52	+0.4
5,067,027	+		PFLU_RS22515	0.52	+0.9
5,067,027	+		PFLU_RS22515	0.52	-0.8
5,067,027	+		PFLU_RS22515	0.52	-0.5
5,067,027	+		PFLU_RS22515	0.52	-1.4
5,067,027	+		PFLU_RS22515	0.52	+1.1
5,067,028	-		PFLU_RS22515	0.52	+0.1
5,067,028	-		PFLU_RS22515	0.52	+0.6
5,067,028	-		PFLU_RS22515	0.52	+0.5
5,067,028	-		PFLU_RS22515	0.52	-0.9
5,067,028	-		PFLU_RS22515	0.52	-0.4
5,067,028	-		PFLU_RS22515	0.52	+0.3
5,067,028	-		PFLU_RS22515	0.52	-0.7
5,067,028	-		PFLU_RS22515	0.52	-0.1
5,067,028	-		PFLU_RS22515	0.52	+0.0
5,067,028	-		PFLU_RS22515	0.52	+0.4
5,067,028	-		PFLU_RS22515	0.52	+0.6
5,067,028	-		PFLU_RS22515	0.52	+0.5
5,067,028	-		PFLU_RS22515	0.52	-0.7
5,067,028	-		PFLU_RS22515	0.52	+0.8
5,067,028	-		PFLU_RS22515	0.52	-0.4
5,067,028	-		PFLU_RS22515	0.52	-0.3
5,067,028	-		PFLU_RS22515	0.52	-1.3
5,067,114	+		PFLU_RS22515	0.59	-1.3
5,067,114	+		PFLU_RS22515	0.59	-1.4
5,067,114	+		PFLU_RS22515	0.59	-1.4
5,067,114	+		PFLU_RS22515	0.59	-0.1
5,067,114	+		PFLU_RS22515	0.59	-1.3
5,067,114	+		PFLU_RS22515	0.59	+1.5
5,067,115	-		PFLU_RS22515	0.59	+0.3
5,067,115	-		PFLU_RS22515	0.59	+0.3
5,067,115	-		PFLU_RS22515	0.59	-0.9
5,067,115	-		PFLU_RS22515	0.59	+0.5
5,067,123	+		PFLU_RS22515	0.60	-1.8
5,067,123	+		PFLU_RS22515	0.60	-0.9
5,067,360	+		PFLU_RS22515	0.78	-0.5
5,067,360	+		PFLU_RS22515	0.78	-0.5
5,067,360	+		PFLU_RS22515	0.78	+0.8
5,067,360	+		PFLU_RS22515	0.78	-0.9
5,067,360	+		PFLU_RS22515	0.78	-0.4
5,067,360	+		PFLU_RS22515	0.78	+0.7
5,067,360	+		PFLU_RS22515	0.78	-0.5
5,067,360	+		PFLU_RS22515	0.78	-0.9
5,067,360	+		PFLU_RS22515	0.78	+0.9
5,067,360	+		PFLU_RS22515	0.78	-0.8
5,067,360	+		PFLU_RS22515	0.78	-0.6
5,067,361	-		PFLU_RS22515	0.78	-0.1
5,067,361	-		PFLU_RS22515	0.78	+0.5
5,067,361	-		PFLU_RS22515	0.78	+0.5
5,067,361	-		PFLU_RS22515	0.78	-0.1
5,067,361	-		PFLU_RS22515	0.78	-0.2
5,067,361	-		PFLU_RS22515	0.78	+0.6
5,067,361	-		PFLU_RS22515	0.78	+0.2
5,067,361	-		PFLU_RS22515	0.78	+0.7
5,067,361	-		PFLU_RS22515	0.78	-0.1
5,067,361	-		PFLU_RS22515	0.78	+1.2
5,067,411	+		PFLU_RS22515	0.82	+0.7
5,067,411	+		PFLU_RS22515	0.82	-0.7
5,067,412	-		PFLU_RS22515	0.82	+0.4
5,067,412	-		PFLU_RS22515	0.82	+0.3
5,067,412	-		PFLU_RS22515	0.82	-2.3
5,067,464	+		PFLU_RS22515	0.86	-1.7
5,067,507	+		PFLU_RS22515	0.89	+0.2
5,067,507	+		PFLU_RS22515	0.89	+1.3
5,067,507	+		PFLU_RS22515	0.89	+0.8
5,067,508	-		PFLU_RS22515	0.89	-0.7
5,067,508	-		PFLU_RS22515	0.89	-2.3
5,067,508	-		PFLU_RS22515	0.89	+2.6
5,067,508	-		PFLU_RS22515	0.89	+0.8
5,067,615	+				-0.5
5,067,615	+				+0.9
5,067,615	+				+0.6
5,067,615	+				-0.1
5,067,615	+				-0.3
5,067,615	+				+0.9
5,067,615	+				+0.1
5,067,615	+				+0.4
5,067,615	+				-0.5
5,067,615	+				+0.4
5,067,615	+				-0.9
5,067,615	+				+0.5
5,067,615	+				-0.2
5,067,615	+				-0.2
5,067,615	+				+0.6
5,067,615	+				+0.4
5,067,615	+				-0.1
5,067,615	+				+0.2
5,067,615	+				+0.6
5,067,615	+				-1.4
5,067,615	+				-1.9
5,067,616	-				-0.0
5,067,616	-				-0.8
5,067,616	-				+0.3
5,067,616	-				-1.5
5,067,616	-				-0.1
5,067,616	-				-1.0
5,067,616	-				+0.3
5,067,616	-				-2.3
5,067,616	-				-0.5
5,067,616	-				-0.1
5,067,616	-				+2.1
5,067,616	-				+0.5
5,067,616	-				-2.1
5,067,616	-				-0.3
5,067,646	-				+0.7
5,067,717	+				-0.2
5,067,718	-				-0.3
5,067,718	-				-0.5
5,067,718	-				+0.5
5,067,771	+				+0.4
5,067,771	+				-0.2
5,067,771	+				-0.1
5,067,771	+				-0.6
5,067,772	-				+0.9
5,067,772	-				-0.3
5,067,772	-				-0.2
5,067,775	+				-0.7
5,067,775	+				+1.5
5,067,775	+				+1.5
5,067,775	+				+0.2
5,067,776	-				+0.1
5,067,776	-				+0.9
5,067,776	-				-1.5
5,067,884	+		PFLU_RS22520	0.14	-0.4
5,067,971	-		PFLU_RS22520	0.26	+0.5
5,067,971	-		PFLU_RS22520	0.26	-1.5
5,067,971	-		PFLU_RS22520	0.26	+0.5
5,068,113	-		PFLU_RS22520	0.44	-1.1
5,068,448	+		PFLU_RS22520	0.88	+0.9
5,068,449	-		PFLU_RS22520	0.88	+0.5
5,068,449	-		PFLU_RS22520	0.88	-1.7
5,068,449	-		PFLU_RS22520	0.88	-1.1
5,068,570	+				+0.7
5,068,576	+				-1.7
5,068,576	+				-0.2
5,068,577	-				+0.4
5,068,579	+				-0.1
5,068,579	+				-0.1
5,068,605	+				-0.4
5,068,605	+				-0.0
5,068,605	+				-0.1
5,068,605	+				+0.2
5,068,605	+				-0.5
5,068,605	+				-1.1
5,068,605	+				+0.8
5,068,605	+				-1.5
5,068,605	+				+2.3
5,068,605	+				-1.7
5,068,606	-				+1.8
5,068,606	-				-0.0
5,068,606	-				+0.2
5,068,606	-				+1.8
5,068,606	-				-1.9
5,068,606	-				+0.0
5,068,606	-				+1.5
5,068,630	+				-0.7
5,068,630	+				+0.1
5,068,631	-				+0.1
5,068,631	-				+0.3
5,068,657	+				+1.4
5,068,657	+				-0.2
5,068,657	+				-1.4
5,068,657	+				+0.1
5,068,657	+				+0.5
5,068,657	+				-1.1
5,068,657	+				-0.1
5,068,657	+				-2.3
5,068,657	+				+0.1
5,068,657	+				-0.1
5,068,658	-				+0.7
5,068,658	-				+0.5
5,068,658	-				-1.3
5,068,658	-				+0.1
5,068,658	-				+1.5
5,068,658	-				+0.2
5,068,658	-				+0.5
5,068,681	+				-0.0
5,068,681	+				+0.7
5,068,681	+				-2.9
5,068,682	-				+1.5
5,068,682	-				+0.7
5,068,682	-				+0.4
5,068,682	-				+0.5
5,068,710	-				+1.5
5,068,710	-				-0.1
5,068,710	-				-0.3
5,068,747	+				-0.4
5,068,747	+				+1.0
5,068,747	+				+0.5
5,068,748	-				-0.7
5,068,748	-				+0.3
5,068,855	+				-0.7
5,068,856	-				-1.1
5,069,059	+		PFLU_RS22525	0.25	-0.7
5,069,059	+		PFLU_RS22525	0.25	-0.8
5,069,060	-		PFLU_RS22525	0.25	-1.8
5,069,060	-		PFLU_RS22525	0.25	-1.4
5,069,060	-		PFLU_RS22525	0.25	+0.4
5,069,060	-		PFLU_RS22525	0.25	+0.3
5,069,060	-		PFLU_RS22525	0.25	-0.0
5,069,080	+		PFLU_RS22525	0.26	+2.5
5,069,080	+		PFLU_RS22525	0.26	-0.6
5,069,080	+		PFLU_RS22525	0.26	+0.6
5,069,080	+		PFLU_RS22525	0.26	+0.7
5,069,080	+		PFLU_RS22525	0.26	+1.5
5,069,080	+		PFLU_RS22525	0.26	-0.2
5,069,080	+		PFLU_RS22525	0.26	+1.5
5,069,080	+		PFLU_RS22525	0.26	+0.5
5,069,080	+		PFLU_RS22525	0.26	+0.1
5,069,080	+		PFLU_RS22525	0.26	-1.8
5,069,081	-		PFLU_RS22525	0.27	-0.1
5,069,081	-		PFLU_RS22525	0.27	+0.7
5,069,081	-		PFLU_RS22525	0.27	+0.0
5,069,081	-		PFLU_RS22525	0.27	+0.9
5,069,081	-		PFLU_RS22525	0.27	-0.7
5,069,081	-		PFLU_RS22525	0.27	-0.1
5,069,081	-		PFLU_RS22525	0.27	+0.1
5,069,081	-		PFLU_RS22525	0.27	-0.4
5,069,081	-		PFLU_RS22525	0.27	-0.5
5,069,081	-		PFLU_RS22525	0.27	+1.9
5,069,081	-		PFLU_RS22525	0.27	-0.6
5,069,085	+		PFLU_RS22525	0.27	-2.5
5,069,085	+		PFLU_RS22525	0.27	-0.9
5,069,085	+		PFLU_RS22525	0.27	-0.9
5,069,085	+		PFLU_RS22525	0.27	-0.2
5,069,085	+		PFLU_RS22525	0.27	-0.2
5,069,085	+		PFLU_RS22525	0.27	-0.1
5,069,085	+		PFLU_RS22525	0.27	+0.8
5,069,085	+		PFLU_RS22525	0.27	+0.3
5,069,085	+		PFLU_RS22525	0.27	-0.5
5,069,085	+		PFLU_RS22525	0.27	+1.3
5,069,085	+		PFLU_RS22525	0.27	-1.2
5,069,086	-		PFLU_RS22525	0.27	-0.7
5,069,086	-		PFLU_RS22525	0.27	+0.7
5,069,086	-		PFLU_RS22525	0.27	-0.7
5,069,086	-		PFLU_RS22525	0.27	+0.5
5,069,086	-		PFLU_RS22525	0.27	-0.5
5,069,086	-		PFLU_RS22525	0.27	+0.4
5,069,086	-		PFLU_RS22525	0.27	+0.8
5,069,086	-		PFLU_RS22525	0.27	+0.1
5,069,086	-		PFLU_RS22525	0.27	+1.5
5,069,086	-		PFLU_RS22525	0.27	+0.9
5,069,086	-		PFLU_RS22525	0.27	+2.5
5,069,086	-		PFLU_RS22525	0.27	+0.1
5,069,263	+		PFLU_RS22525	0.42	-0.5
5,069,263	+		PFLU_RS22525	0.42	+0.3
5,069,263	+		PFLU_RS22525	0.42	+1.0
5,069,263	+		PFLU_RS22525	0.42	-0.6
5,069,263	+		PFLU_RS22525	0.42	-0.1
5,069,263	+		PFLU_RS22525	0.42	+0.1
5,069,263	+		PFLU_RS22525	0.42	+0.1
5,069,263	+		PFLU_RS22525	0.42	-0.2
5,069,264	-		PFLU_RS22525	0.42	+0.4
5,069,264	-		PFLU_RS22525	0.42	+0.3
5,069,264	-		PFLU_RS22525	0.42	-0.1
5,069,264	-		PFLU_RS22525	0.42	-0.1
5,069,264	-		PFLU_RS22525	0.42	+0.2
5,069,264	-		PFLU_RS22525	0.42	+1.1
5,069,264	-		PFLU_RS22525	0.42	-1.6
5,069,264	-		PFLU_RS22525	0.42	+0.2
5,069,264	-		PFLU_RS22525	0.42	-0.8
5,069,264	-		PFLU_RS22525	0.42	+0.0
5,069,264	-		PFLU_RS22525	0.42	+1.6
5,069,264	-		PFLU_RS22525	0.42	-0.4
5,069,264	-		PFLU_RS22525	0.42	+0.1
5,069,264	-		PFLU_RS22525	0.42	-0.1
5,069,264	-		PFLU_RS22525	0.42	-0.9
5,069,267	+		PFLU_RS22525	0.42	+0.2
5,069,267	+		PFLU_RS22525	0.42	-0.0
5,069,267	+		PFLU_RS22525	0.42	-0.2
5,069,267	+		PFLU_RS22525	0.42	+0.4
5,069,267	+		PFLU_RS22525	0.42	+0.3
5,069,267	+		PFLU_RS22525	0.42	-2.1
5,069,267	+		PFLU_RS22525	0.42	+0.1
5,069,267	+		PFLU_RS22525	0.42	-0.2
5,069,267	+		PFLU_RS22525	0.42	-1.1
5,069,267	+		PFLU_RS22525	0.42	-1.3
5,069,267	+		PFLU_RS22525	0.42	+0.3
5,069,267	+		PFLU_RS22525	0.42	-0.6
5,069,267	+		PFLU_RS22525	0.42	+0.5
5,069,267	+		PFLU_RS22525	0.42	-0.1
5,069,268	-		PFLU_RS22525	0.42	-2.2
5,069,268	-		PFLU_RS22525	0.42	-0.9
5,069,268	-		PFLU_RS22525	0.42	-1.9
5,069,268	-		PFLU_RS22525	0.42	+1.2
5,069,268	-		PFLU_RS22525	0.42	+0.2
5,069,268	-		PFLU_RS22525	0.42	+0.9
5,069,268	-		PFLU_RS22525	0.42	-0.5
5,069,268	-		PFLU_RS22525	0.42	+0.3
5,069,268	-		PFLU_RS22525	0.42	+1.9
5,069,294	-		PFLU_RS22525	0.44	+0.1
5,069,390	+		PFLU_RS22525	0.52	+2.7
5,069,506	+		PFLU_RS22525	0.62	-0.1
5,069,506	+		PFLU_RS22525	0.62	+0.2
5,069,507	-		PFLU_RS22525	0.62	-0.6
5,069,507	-		PFLU_RS22525	0.62	-0.5
5,069,507	-		PFLU_RS22525	0.62	+0.3
5,069,507	-		PFLU_RS22525	0.62	+0.5
5,069,507	-		PFLU_RS22525	0.62	+0.3
5,069,507	-		PFLU_RS22525	0.62	-0.1
5,069,507	-		PFLU_RS22525	0.62	-0.2
5,069,507	-		PFLU_RS22525	0.62	+0.4
5,069,508	+		PFLU_RS22525	0.62	+0.3
5,069,508	+		PFLU_RS22525	0.62	+0.9
5,069,508	+		PFLU_RS22525	0.62	+0.3
5,069,508	+		PFLU_RS22525	0.62	+0.3
5,069,508	+		PFLU_RS22525	0.62	+0.7
5,069,509	-		PFLU_RS22525	0.62	+1.0
5,069,509	-		PFLU_RS22525	0.62	+1.0
5,069,509	-		PFLU_RS22525	0.62	-2.3
5,069,509	-		PFLU_RS22525	0.62	-0.2