Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS06755

Experiment: Quinic Acid 10 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Quinic Acid 10 mM (C)
1,508,258	+		PFLU_RS06750	0.26	-3.6
1,508,258	+		PFLU_RS06750	0.26	-2.8
1,508,258	+		PFLU_RS06750	0.26	-0.7
1,508,258	+		PFLU_RS06750	0.26	-0.6
1,508,258	+		PFLU_RS06750	0.26	-3.1
1,508,258	+		PFLU_RS06750	0.26	-0.5
1,508,258	+		PFLU_RS06750	0.26	-1.4
1,508,259	-		PFLU_RS06750	0.26	-0.4
1,508,259	-		PFLU_RS06750	0.26	-2.5
1,508,259	-		PFLU_RS06750	0.26	-2.4
1,508,259	-		PFLU_RS06750	0.26	-2.5
1,508,259	-		PFLU_RS06750	0.26	+0.6
1,508,259	-		PFLU_RS06750	0.26	-2.8
1,508,354	+		PFLU_RS06750	0.33	-1.5
1,508,354	+		PFLU_RS06750	0.33	-1.7
1,508,354	+		PFLU_RS06750	0.33	-0.7
1,508,354	+		PFLU_RS06750	0.33	-1.5
1,508,354	+		PFLU_RS06750	0.33	-2.3
1,508,354	+		PFLU_RS06750	0.33	-1.4
1,508,354	+		PFLU_RS06750	0.33	-1.2
1,508,354	+		PFLU_RS06750	0.33	-1.1
1,508,354	+		PFLU_RS06750	0.33	-2.0
1,508,354	+		PFLU_RS06750	0.33	-1.6
1,508,354	+		PFLU_RS06750	0.33	-1.0
1,508,354	+		PFLU_RS06750	0.33	-1.9
1,508,354	+		PFLU_RS06750	0.33	-0.8
1,508,354	+		PFLU_RS06750	0.33	-3.3
1,508,355	-		PFLU_RS06750	0.33	-2.8
1,508,355	-		PFLU_RS06750	0.33	-3.2
1,508,355	-		PFLU_RS06750	0.33	-2.1
1,508,355	-		PFLU_RS06750	0.33	-2.0
1,508,355	-		PFLU_RS06750	0.33	-1.4
1,508,355	-		PFLU_RS06750	0.33	-2.6
1,508,355	-		PFLU_RS06750	0.33	-2.1
1,508,355	-		PFLU_RS06750	0.33	-2.4
1,508,355	-		PFLU_RS06750	0.33	-3.0
1,508,355	-		PFLU_RS06750	0.33	-2.9
1,508,355	-		PFLU_RS06750	0.33	-1.0
1,508,355	-		PFLU_RS06750	0.33	-2.3
1,508,355	-		PFLU_RS06750	0.33	-1.0
1,508,355	-		PFLU_RS06750	0.33	-2.4
1,508,355	-		PFLU_RS06750	0.33	-2.5
1,508,408	+		PFLU_RS06750	0.37	-0.0
1,508,408	+		PFLU_RS06750	0.37	-0.4
1,508,408	+		PFLU_RS06750	0.37	-2.1
1,508,408	+		PFLU_RS06750	0.37	-3.4
1,508,638	+		PFLU_RS06750	0.55	-2.8
1,508,638	+		PFLU_RS06750	0.55	-1.4
1,508,639	-		PFLU_RS06750	0.55	-2.3
1,508,639	-		PFLU_RS06750	0.55	-3.8
1,508,639	-		PFLU_RS06750	0.55	-2.1
1,508,639	-		PFLU_RS06750	0.55	-2.0
1,508,693	+		PFLU_RS06750	0.59	-1.5
1,508,694	-		PFLU_RS06750	0.59	-3.2
1,508,694	-		PFLU_RS06750	0.59	-2.5
1,508,694	-		PFLU_RS06750	0.59	-2.3
1,508,694	-		PFLU_RS06750	0.59	-2.1
1,508,708	+		PFLU_RS06750	0.60	+0.2
1,508,708	+		PFLU_RS06750	0.60	-0.5
1,508,708	+		PFLU_RS06750	0.60	+0.1
1,508,708	+		PFLU_RS06750	0.60	+0.3
1,508,708	+		PFLU_RS06750	0.60	-0.3
1,508,708	+		PFLU_RS06750	0.60	+0.6
1,508,708	+		PFLU_RS06750	0.60	+0.0
1,508,708	+		PFLU_RS06750	0.60	+0.4
1,508,708	+		PFLU_RS06750	0.60	+0.2
1,508,708	+		PFLU_RS06750	0.60	+1.0
1,508,708	+		PFLU_RS06750	0.60	-0.4
1,508,708	+		PFLU_RS06750	0.60	-1.0
1,508,708	+		PFLU_RS06750	0.60	-0.7
1,508,708	+		PFLU_RS06750	0.60	-1.2
1,508,708	+		PFLU_RS06750	0.60	-1.5
1,508,708	+		PFLU_RS06750	0.60	+0.3
1,508,708	+		PFLU_RS06750	0.60	-0.5
1,508,708	+		PFLU_RS06750	0.60	-1.0
1,508,708	+		PFLU_RS06750	0.60	-1.4
1,508,708	+		PFLU_RS06750	0.60	+0.6
1,508,708	+		PFLU_RS06750	0.60	-0.7
1,508,709	-		PFLU_RS06750	0.60	-2.3
1,508,709	-		PFLU_RS06750	0.60	-0.7
1,508,709	-		PFLU_RS06750	0.60	-3.2
1,508,709	-		PFLU_RS06750	0.60	-2.8
1,508,709	-		PFLU_RS06750	0.60	-2.5
1,508,709	-		PFLU_RS06750	0.60	-2.3
1,508,709	-		PFLU_RS06750	0.60	-3.6
1,508,709	-		PFLU_RS06750	0.60	-2.4
1,508,709	-		PFLU_RS06750	0.60	-3.0
1,508,709	-		PFLU_RS06750	0.60	-3.8
1,508,709	-		PFLU_RS06750	0.60	-1.2
1,508,709	-		PFLU_RS06750	0.60	-1.0
1,508,709	-		PFLU_RS06750	0.60	-2.5
1,508,709	-		PFLU_RS06750	0.60	-2.4
1,508,709	-		PFLU_RS06750	0.60	-3.4
1,508,709	-		PFLU_RS06750	0.60	-2.6
1,508,709	-		PFLU_RS06750	0.60	-3.8
1,508,709	-		PFLU_RS06750	0.60	-2.8
1,508,709	-		PFLU_RS06750	0.60	-1.3
1,508,709	-		PFLU_RS06750	0.60	-2.7
1,508,709	-		PFLU_RS06750	0.60	-1.6
1,508,709	-		PFLU_RS06750	0.60	-3.0
1,508,709	-		PFLU_RS06750	0.60	-1.8
1,508,720	+		PFLU_RS06750	0.61	+0.6
1,508,720	+		PFLU_RS06750	0.61	-0.5
1,508,720	+		PFLU_RS06750	0.61	-0.4
1,508,720	+		PFLU_RS06750	0.61	-1.2
1,508,721	-		PFLU_RS06750	0.61	-2.9
1,508,721	-		PFLU_RS06750	0.61	-2.8
1,508,721	-		PFLU_RS06750	0.61	+1.6
1,508,721	-		PFLU_RS06750	0.61	-4.0
1,508,721	-		PFLU_RS06750	0.61	-2.2
1,508,721	-		PFLU_RS06750	0.61	-1.0
1,508,721	-		PFLU_RS06750	0.61	-1.4
1,508,762	+		PFLU_RS06750	0.65	-0.7
1,508,762	+		PFLU_RS06750	0.65	-1.1
1,508,762	+		PFLU_RS06750	0.65	-0.7
1,508,762	+		PFLU_RS06750	0.65	+0.6
1,508,762	+		PFLU_RS06750	0.65	-0.1
1,508,762	+		PFLU_RS06750	0.65	-0.1
1,508,762	+		PFLU_RS06750	0.65	-0.1
1,508,762	+		PFLU_RS06750	0.65	+1.0
1,508,762	+		PFLU_RS06750	0.65	-0.4
1,508,763	-		PFLU_RS06750	0.65	-1.4
1,508,763	-		PFLU_RS06750	0.65	-2.7
1,508,763	-		PFLU_RS06750	0.65	-2.3
1,508,763	-		PFLU_RS06750	0.65	-2.3
1,508,763	-		PFLU_RS06750	0.65	-1.7
1,508,763	-		PFLU_RS06750	0.65	-1.0
1,508,763	-		PFLU_RS06750	0.65	-1.7
1,508,763	-		PFLU_RS06750	0.65	-2.6
1,508,763	-		PFLU_RS06750	0.65	-0.7
1,508,763	-		PFLU_RS06750	0.65	-3.0
1,508,763	-		PFLU_RS06750	0.65	-0.2
1,508,763	-		PFLU_RS06750	0.65	-1.5
1,508,763	-		PFLU_RS06750	0.65	-2.9
1,508,789	+		PFLU_RS06750	0.67	-0.0
1,508,789	+		PFLU_RS06750	0.67	-2.1
1,508,789	+		PFLU_RS06750	0.67	+0.6
1,508,789	+		PFLU_RS06750	0.67	+0.6
1,508,789	+		PFLU_RS06750	0.67	-0.1
1,508,789	+		PFLU_RS06750	0.67	-0.3
1,508,789	+		PFLU_RS06750	0.67	+0.4
1,508,789	+		PFLU_RS06750	0.67	-0.7
1,508,789	+		PFLU_RS06750	0.67	+1.6
1,508,789	+		PFLU_RS06750	0.67	+1.9
1,508,790	-		PFLU_RS06750	0.67	-3.3
1,508,790	-		PFLU_RS06750	0.67	-2.7
1,508,790	-		PFLU_RS06750	0.67	-3.5
1,508,790	-		PFLU_RS06750	0.67	-1.0
1,508,790	-		PFLU_RS06750	0.67	-1.4
1,508,790	-		PFLU_RS06750	0.67	-1.4
1,508,790	-		PFLU_RS06750	0.67	-1.0
1,508,790	-		PFLU_RS06750	0.67	-2.2
1,508,790	-		PFLU_RS06750	0.67	-2.2
1,508,790	-		PFLU_RS06750	0.67	-2.3
1,508,790	-		PFLU_RS06750	0.67	-1.0
1,508,790	-		PFLU_RS06750	0.67	-2.4
1,508,790	-		PFLU_RS06750	0.67	-1.8
1,508,790	-		PFLU_RS06750	0.67	-2.3
1,508,790	-		PFLU_RS06750	0.67	-0.4
1,508,972	+		PFLU_RS06750	0.81	-1.0
1,508,972	+		PFLU_RS06750	0.81	-1.0
1,508,972	+		PFLU_RS06750	0.81	-1.1
1,508,972	+		PFLU_RS06750	0.81	+0.3
1,508,973	-		PFLU_RS06750	0.81	-1.7
1,508,973	-		PFLU_RS06750	0.81	-1.8
1,508,973	-		PFLU_RS06750	0.81	-0.2
1,508,973	-		PFLU_RS06750	0.81	-1.8
1,508,973	-		PFLU_RS06750	0.81	-1.0
1,508,973	-		PFLU_RS06750	0.81	-0.7
1,508,973	-		PFLU_RS06750	0.81	-2.0
1,508,973	-		PFLU_RS06750	0.81	-1.2
1,509,021	+		PFLU_RS06750	0.85	-1.2
1,509,021	+		PFLU_RS06750	0.85	+1.5
1,509,021	+		PFLU_RS06750	0.85	+0.5
1,509,021	+		PFLU_RS06750	0.85	-1.2
1,509,021	+		PFLU_RS06750	0.85	+0.7
1,509,022	-		PFLU_RS06750	0.85	-2.3
1,509,022	-		PFLU_RS06750	0.85	-2.5
1,509,022	-		PFLU_RS06750	0.85	-0.4
1,509,022	-		PFLU_RS06750	0.85	-2.4
1,509,022	-		PFLU_RS06750	0.85	-2.2
1,509,022	-		PFLU_RS06750	0.85	-2.2
1,509,022	-		PFLU_RS06750	0.85	-1.4
1,509,022	-		PFLU_RS06750	0.85	-1.8
1,509,086	+		PFLU_RS06750	0.90	+0.1
1,509,086	+		PFLU_RS06750	0.90	-0.1
1,509,086	+		PFLU_RS06750	0.90	+1.6
1,509,086	+		PFLU_RS06750	0.90	+0.5
1,509,086	+		PFLU_RS06750	0.90	-0.5
1,509,086	+		PFLU_RS06750	0.90	+0.2
1,509,087	-		PFLU_RS06750	0.90	-1.5
1,509,087	-		PFLU_RS06750	0.90	+0.0
1,509,087	-		PFLU_RS06750	0.90	-2.5
1,509,131	+				-0.1
1,509,131	+				-0.7
1,509,131	+				-0.5
1,509,131	+				-0.8
1,509,131	+				+0.3
1,509,132	-				-2.5
1,509,132	-				-1.3
1,509,132	-				-1.7
1,509,132	-				-3.3
1,509,132	-				-1.7
1,509,137	+				+0.2
1,509,137	+				-0.5
1,509,137	+				+0.1
1,509,137	+				+0.0
1,509,137	+				-0.5
1,509,138	-				-2.5
1,509,138	-				-3.0
1,509,138	-				+0.0
1,509,138	-				-2.8
1,509,138	-				-3.7
1,509,200	+				+1.7
1,509,201	-				-1.0
1,509,201	-				-0.4
1,509,201	-				-2.5
1,509,201	-				+0.2
1,509,201	-				-0.4
1,509,201	-				-2.2
1,509,201	-				-1.5
1,509,218	+				+0.9
1,509,219	-				-3.0
1,509,219	-				-1.7
1,509,230	+				-1.7
1,509,230	+				-0.4
1,509,230	+				+0.0
1,509,230	+				-1.2
1,509,230	+				-3.7
1,509,230	+				-1.8
1,509,230	+				-3.6
1,509,230	+				-1.2
1,509,230	+				-2.4
1,509,230	+				-1.5
1,509,230	+				-2.1
1,509,230	+				-2.2
1,509,230	+				-3.6
1,509,230	+				-0.4
1,509,230	+				-2.4
1,509,230	+				+0.6
1,509,230	+				-2.4
1,509,230	+				-2.3
1,509,231	-				-3.0
1,509,231	-				-2.4
1,509,231	-				-2.1
1,509,231	-				-2.3
1,509,231	-				-2.0
1,509,231	-				-3.5
1,509,231	-				-3.0
1,509,231	-				-0.7
1,509,231	-				-1.5
1,509,231	-				-2.3
1,509,231	-				-1.2
1,509,231	-				-1.0
1,509,231	-				-1.4
1,509,231	-				-3.6
1,509,231	-				-1.8
1,509,231	-				-1.2
1,509,231	-				-2.8
1,509,231	-				-2.0
1,509,231	-				-2.5
1,509,231	-				-1.2
1,509,231	-				-1.4
1,509,231	-				-2.5
1,509,231	-				-3.4
1,509,231	-				-3.2
1,509,231	-				-1.7
1,509,231	-				-3.0
1,509,231	-				-1.0
1,509,267	+				-1.0
1,509,267	+				-2.7
1,509,267	+				-1.2
1,509,267	+				-1.0
1,509,267	+				-1.8
1,509,268	-				-1.0
1,509,268	-				-3.5
1,509,268	-				-2.1
1,509,268	-				-1.0
1,509,268	-				-0.7
1,509,268	-				-2.9
1,509,268	-				-1.8
1,509,268	-				-1.7
1,509,268	-				-1.8
1,509,268	-				-1.5
1,509,426	+		PFLU_RS06755	0.14	-2.9
1,509,426	+		PFLU_RS06755	0.14	-3.0
1,509,426	+		PFLU_RS06755	0.14	-1.0
1,509,426	+		PFLU_RS06755	0.14	-2.0
1,509,426	+		PFLU_RS06755	0.14	+0.6
1,509,426	+		PFLU_RS06755	0.14	+0.3
1,509,426	+		PFLU_RS06755	0.14	-3.4
1,509,426	+		PFLU_RS06755	0.14	-1.7
1,509,427	-		PFLU_RS06755	0.14	-2.5
1,509,427	-		PFLU_RS06755	0.14	-2.5
1,509,427	-		PFLU_RS06755	0.14	-1.8
1,509,427	-		PFLU_RS06755	0.14	+0.0
1,509,427	-		PFLU_RS06755	0.14	-3.8
1,509,427	-		PFLU_RS06755	0.14	-2.1
1,509,427	-		PFLU_RS06755	0.14	-2.7
1,509,537	+		PFLU_RS06755	0.22	-2.5
1,509,537	+		PFLU_RS06755	0.22	-2.5
1,509,537	+		PFLU_RS06755	0.22	-2.5
1,509,537	+		PFLU_RS06755	0.22	-2.0
1,509,537	+		PFLU_RS06755	0.22	-2.5
1,509,538	-		PFLU_RS06755	0.22	-2.2
1,509,538	-		PFLU_RS06755	0.22	-1.2
1,509,538	-		PFLU_RS06755	0.22	+0.0
1,509,538	-		PFLU_RS06755	0.22	-0.7
1,509,538	-		PFLU_RS06755	0.22	-1.7
1,509,538	-		PFLU_RS06755	0.22	-0.4
1,509,538	-		PFLU_RS06755	0.22	-3.8
1,509,538	-		PFLU_RS06755	0.22	-1.8
1,509,538	-		PFLU_RS06755	0.22	-3.0
1,509,538	-		PFLU_RS06755	0.22	-3.1
1,509,538	-		PFLU_RS06755	0.22	-2.5
1,509,538	-		PFLU_RS06755	0.22	-2.0
1,509,538	-		PFLU_RS06755	0.22	-1.5
1,509,538	-		PFLU_RS06755	0.22	-2.3
1,509,538	-		PFLU_RS06755	0.22	-2.2
1,509,538	-		PFLU_RS06755	0.22	-1.4
1,509,695	+		PFLU_RS06755	0.34	+0.0
1,509,695	+		PFLU_RS06755	0.34	-2.8
1,509,695	+		PFLU_RS06755	0.34	-2.8
1,509,696	-		PFLU_RS06755	0.34	-2.5
1,509,696	-		PFLU_RS06755	0.34	-2.0
1,509,696	-		PFLU_RS06755	0.34	-1.5
1,509,696	-		PFLU_RS06755	0.34	-1.6
1,510,001	+		PFLU_RS06755	0.56	-1.4
1,510,530	+				-1.4
1,510,530	+				-0.2
1,510,530	+				-3.2
1,510,531	-				-1.8
1,510,531	-				-2.4
1,510,531	-				-1.5
1,510,616	+				-1.8
1,510,616	+				-1.0
1,510,616	+				-2.4
1,510,616	+				-2.0
1,510,616	+				+0.4
1,510,616	+				-2.0
1,510,616	+				-3.4
1,510,617	-				-1.5
1,510,617	-				-2.8
1,510,617	-				-3.1
1,510,617	-				-2.9
1,510,617	-				-1.0
1,510,617	-				-3.2
1,510,642	+				-3.8
1,510,643	-				-0.7
1,510,643	-				-1.2
1,510,710	+		PFLU_RS06760	0.13	+0.6
1,510,710	+		PFLU_RS06760	0.13	-2.0
1,510,710	+		PFLU_RS06760	0.13	-0.4
1,510,710	+		PFLU_RS06760	0.13	-2.3
1,510,710	+		PFLU_RS06760	0.13	-3.5
1,510,710	+		PFLU_RS06760	0.13	-1.7
1,510,710	+		PFLU_RS06760	0.13	-2.9
1,510,710	+		PFLU_RS06760	0.13	-1.4
1,510,710	+		PFLU_RS06760	0.13	-3.2
1,510,710	+		PFLU_RS06760	0.13	-1.2
1,510,710	+		PFLU_RS06760	0.13	-2.7
1,510,710	+		PFLU_RS06760	0.13	-2.4
1,510,710	+		PFLU_RS06760	0.13	-3.2
1,510,710	+		PFLU_RS06760	0.13	-1.7
1,510,710	+		PFLU_RS06760	0.13	-4.1
1,510,710	+		PFLU_RS06760	0.13	-2.2
1,510,710	+		PFLU_RS06760	0.13	-2.4
1,510,710	+		PFLU_RS06760	0.13	-3.3
1,510,710	+		PFLU_RS06760	0.13	-2.5
1,510,710	+		PFLU_RS06760	0.13	-2.3
1,510,710	+		PFLU_RS06760	0.13	-2.4
1,510,710	+		PFLU_RS06760	0.13	-3.1
1,510,710	+		PFLU_RS06760	0.13	-2.1
1,510,710	+		PFLU_RS06760	0.13	-2.9
1,510,711	-		PFLU_RS06760	0.13	-2.4
1,510,711	-		PFLU_RS06760	0.13	-3.1
1,510,711	-		PFLU_RS06760	0.13	-0.7
1,510,711	-		PFLU_RS06760	0.13	-1.0
1,510,711	-		PFLU_RS06760	0.13	-1.5
1,510,711	-		PFLU_RS06760	0.13	-2.1
1,510,711	-		PFLU_RS06760	0.13	-0.4
1,510,711	-		PFLU_RS06760	0.13	-1.0
1,510,711	-		PFLU_RS06760	0.13	-2.1
1,510,711	-		PFLU_RS06760	0.13	-2.0
1,510,711	-		PFLU_RS06760	0.13	-3.4
1,510,711	-		PFLU_RS06760	0.13	-1.0
1,510,711	-		PFLU_RS06760	0.13	-2.6
1,510,711	-		PFLU_RS06760	0.13	-2.3
1,510,711	-		PFLU_RS06760	0.13	-2.3
1,510,711	-		PFLU_RS06760	0.13	-2.3
1,510,711	-		PFLU_RS06760	0.13	-1.6
1,510,711	-		PFLU_RS06760	0.13	-2.7
1,510,711	-		PFLU_RS06760	0.13	-2.4
1,510,807	+		PFLU_RS06760	0.25	-2.2
1,510,807	+		PFLU_RS06760	0.25	-0.4
1,510,808	-		PFLU_RS06760	0.26	-2.9
1,511,155	+		PFLU_RS06760	0.69	-3.1
1,511,155	+		PFLU_RS06760	0.69	-0.6
1,511,156	-		PFLU_RS06760	0.69	-3.3
1,511,156	-		PFLU_RS06760	0.69	-1.5
1,511,156	-		PFLU_RS06760	0.69	+0.3
1,511,156	-		PFLU_RS06760	0.69	-2.6
1,511,191	+		PFLU_RS06760	0.74	-2.5
1,511,191	+		PFLU_RS06760	0.74	-2.5
1,511,191	+		PFLU_RS06760	0.74	-2.0
1,511,191	+		PFLU_RS06760	0.74	-2.6
1,511,192	-		PFLU_RS06760	0.74	-1.0
1,511,192	-		PFLU_RS06760	0.74	-1.0
1,511,309	-		PFLU_RS06760	0.89	-1.8
1,511,321	-				-2.6
1,511,395	+				+0.1
1,511,395	+				-0.1
1,511,396	-				-1.5
1,511,396	-				-0.5
1,511,396	-				+1.6
1,511,396	-				-0.0
1,511,438	+				+0.1
1,511,471	+				-3.6
1,511,472	-				-1.5
1,511,472	-				-1.2
1,511,472	-				-3.0