Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS06745

Experiment: Quinic Acid 10 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Quinic Acid 10 mM (C)
1,506,392	+				-1.7
1,506,393	-				-1.2
1,506,393	-				-3.4
1,506,456	+				+0.2
1,506,456	+				-0.8
1,506,456	+				-0.7
1,506,456	+				+1.0
1,506,456	+				+0.5
1,506,456	+				-0.2
1,506,456	+				-0.5
1,506,456	+				+2.2
1,506,456	+				-0.6
1,506,457	-				-1.7
1,506,457	-				-1.8
1,506,457	-				-2.5
1,506,457	-				-1.5
1,506,457	-				-2.2
1,506,457	-				-2.2
1,506,457	-				-2.6
1,506,457	-				-2.5
1,506,457	-				-1.7
1,506,459	+				-2.8
1,506,459	+				-2.6
1,506,459	+				-0.8
1,506,459	+				-2.0
1,506,459	+				-1.5
1,506,460	-				-1.5
1,506,460	-				-0.1
1,506,460	-				-1.8
1,506,460	-				-2.7
1,506,460	-				-1.2
1,506,460	-				-1.7
1,506,460	-				-3.0
1,506,527	+				-2.9
1,506,527	+				-1.7
1,506,528	-				-2.7
1,506,528	-				-3.1
1,506,542	+				-0.7
1,506,542	+				-2.6
1,506,788	+		PFLU_RS06740	0.44	-1.5
1,506,788	+		PFLU_RS06740	0.44	-1.0
1,506,789	-		PFLU_RS06740	0.44	-2.1
1,506,789	-		PFLU_RS06740	0.44	-1.0
1,506,789	-		PFLU_RS06740	0.44	-3.3
1,506,789	-		PFLU_RS06740	0.44	-3.0
1,506,789	-		PFLU_RS06740	0.44	-1.4
1,506,789	-		PFLU_RS06740	0.44	-1.2
1,506,876	-		PFLU_RS06740	0.57	-3.5
1,506,905	+		PFLU_RS06740	0.61	-2.0
1,507,001	+		PFLU_RS06740	0.74	-1.0
1,507,001	+		PFLU_RS06740	0.74	-2.1
1,507,001	+		PFLU_RS06740	0.74	-1.0
1,507,001	+		PFLU_RS06740	0.74	-0.7
1,507,001	+		PFLU_RS06740	0.74	-2.4
1,507,001	+		PFLU_RS06740	0.74	-3.0
1,507,001	+		PFLU_RS06740	0.74	-4.2
1,507,001	+		PFLU_RS06740	0.74	-2.5
1,507,001	+		PFLU_RS06740	0.74	-1.6
1,507,001	+		PFLU_RS06740	0.74	-1.1
1,507,001	+		PFLU_RS06740	0.74	-2.5
1,507,001	+		PFLU_RS06740	0.74	-2.5
1,507,001	+		PFLU_RS06740	0.74	-3.1
1,507,001	+		PFLU_RS06740	0.74	+0.6
1,507,001	+		PFLU_RS06740	0.74	-1.8
1,507,001	+		PFLU_RS06740	0.74	-3.1
1,507,001	+		PFLU_RS06740	0.74	-1.8
1,507,001	+		PFLU_RS06740	0.74	-1.7
1,507,002	-		PFLU_RS06740	0.75	-1.7
1,507,002	-		PFLU_RS06740	0.75	-0.7
1,507,002	-		PFLU_RS06740	0.75	-3.7
1,507,002	-		PFLU_RS06740	0.75	-0.8
1,507,002	-		PFLU_RS06740	0.75	-2.6
1,507,002	-		PFLU_RS06740	0.75	-0.4
1,507,002	-		PFLU_RS06740	0.75	-1.7
1,507,002	-		PFLU_RS06740	0.75	-3.3
1,507,002	-		PFLU_RS06740	0.75	+0.0
1,507,002	-		PFLU_RS06740	0.75	-0.4
1,507,002	-		PFLU_RS06740	0.75	-2.7
1,507,002	-		PFLU_RS06740	0.75	-2.4
1,507,002	-		PFLU_RS06740	0.75	-3.1
1,507,002	-		PFLU_RS06740	0.75	-2.5
1,507,002	-		PFLU_RS06740	0.75	-2.0
1,507,002	-		PFLU_RS06740	0.75	-1.5
1,507,002	-		PFLU_RS06740	0.75	-3.0
1,507,028	+		PFLU_RS06740	0.78	-2.1
1,507,029	-		PFLU_RS06740	0.78	-2.0
1,507,029	-		PFLU_RS06740	0.78	-2.5
1,507,040	+		PFLU_RS06740	0.80	-1.5
1,507,040	+		PFLU_RS06740	0.80	-1.0
1,507,041	-		PFLU_RS06740	0.80	-2.2
1,507,041	-		PFLU_RS06740	0.80	-2.1
1,507,041	-		PFLU_RS06740	0.80	-2.5
1,507,041	-		PFLU_RS06740	0.80	-2.7
1,507,115	+				-2.2
1,507,115	+				-3.4
1,507,115	+				-1.2
1,507,116	-				-1.8
1,507,116	-				-2.3
1,507,222	-				-2.1
1,507,222	-				-3.0
1,507,222	-				-1.4
1,507,224	+				-2.7
1,507,224	+				-1.1
1,507,224	+				-2.4
1,507,224	+				-3.1
1,507,224	+				-0.4
1,507,224	+				-1.0
1,507,225	-				-2.2
1,507,225	-				-1.4
1,507,380	+		PFLU_RS06745	0.35	-2.4
1,507,380	+		PFLU_RS06745	0.35	-2.0
1,507,380	+		PFLU_RS06745	0.35	-1.0
1,507,380	+		PFLU_RS06745	0.35	-2.2
1,507,380	+		PFLU_RS06745	0.35	-2.7
1,507,381	-		PFLU_RS06745	0.35	+0.7
1,507,381	-		PFLU_RS06745	0.35	-1.8
1,507,381	-		PFLU_RS06745	0.35	-2.3
1,507,381	-		PFLU_RS06745	0.35	-2.0
1,507,381	-		PFLU_RS06745	0.35	+0.0
1,507,381	-		PFLU_RS06745	0.35	-1.5
1,507,381	-		PFLU_RS06745	0.35	-1.6
1,507,381	-		PFLU_RS06745	0.35	-0.8
1,507,381	-		PFLU_RS06745	0.35	-2.8
1,507,475	+		PFLU_RS06745	0.52	-1.0
1,507,588	-		PFLU_RS06745	0.72	-0.6
1,507,588	-		PFLU_RS06745	0.72	-0.7
1,507,588	-		PFLU_RS06745	0.72	-1.4
1,507,743	+				-0.4
1,507,843	+				-0.3
1,507,843	+				-0.8
1,507,843	+				+0.0
1,507,843	+				+1.4
1,507,843	+				+0.8
1,507,843	+				+0.4
1,507,843	+				+1.2
1,507,843	+				-0.4
1,507,843	+				-1.1
1,507,843	+				+0.3
1,507,843	+				+1.0
1,507,843	+				-0.3
1,507,843	+				+1.1
1,507,844	-				-1.4
1,507,844	-				-0.4
1,507,844	-				-2.6
1,507,844	-				-0.4
1,507,844	-				-3.3
1,507,844	-				-3.0
1,507,844	-				+1.6
1,507,844	-				-2.1
1,507,844	-				-1.2
1,507,844	-				-3.0
1,507,844	-				-1.4
1,507,844	-				-2.6
1,507,844	-				-1.0
1,507,844	-				-3.0
1,507,844	-				-1.7
1,507,844	-				-1.4
1,507,844	-				-0.4
1,507,844	-				-2.2
1,507,876	+				+0.0
1,507,886	+				-1.5
1,507,886	+				-0.1
1,507,886	+				+0.5
1,507,886	+				-0.8
1,507,886	+				+3.4
1,507,886	+				-0.4
1,507,886	+				-1.0
1,507,887	-				-1.3
1,507,887	-				-1.7
1,507,887	-				-0.7
1,507,887	-				-1.4
1,507,892	+				-1.4
1,507,897	+				-0.0
1,507,897	+				-1.7
1,507,899	+				-2.1
1,507,899	+				-0.3
1,507,900	-				+1.6
1,507,900	-				-1.7
1,507,947	-				-3.0
1,507,947	-				-1.4
1,507,947	-				-3.0
1,507,947	-				-2.7
1,507,947	-				-1.6
1,508,027	+				-2.2
1,508,027	+				-2.3
1,508,027	+				-2.1
1,508,027	+				-2.2
1,508,027	+				-2.0
1,508,027	+				-2.3
1,508,028	-				-3.0
1,508,028	-				-2.1
1,508,028	-				-1.5
1,508,028	-				-1.5
1,508,028	-				-2.7
1,508,028	-				-2.5
1,508,028	-				-0.4
1,508,028	-				-2.5
1,508,033	+				-2.1
1,508,033	+				-2.3
1,508,033	+				+1.6
1,508,033	+				-2.0
1,508,033	+				-2.5
1,508,034	-				-1.7
1,508,034	-				-2.3
1,508,034	-				-1.7
1,508,051	+				-1.5
1,508,051	+				-1.5
1,508,051	+				-2.2
1,508,051	+				-0.8
1,508,051	+				-2.5
1,508,051	+				+0.0
1,508,052	-				-1.0
1,508,052	-				-1.1
1,508,052	-				-3.7
1,508,052	-				-2.3
1,508,052	-				-1.4
1,508,052	-				-0.4
1,508,052	-				-1.5
1,508,052	-				-1.3
1,508,052	-				-1.8
1,508,052	-				-0.4
1,508,052	-				-1.7
1,508,052	-				-1.2
1,508,052	-				-1.5
1,508,086	+		PFLU_RS06750	0.12	-1.7
1,508,087	-		PFLU_RS06750	0.12	+0.0
1,508,087	-		PFLU_RS06750	0.12	-1.4
1,508,087	-		PFLU_RS06750	0.12	-1.0
1,508,087	-		PFLU_RS06750	0.12	-2.0
1,508,258	+		PFLU_RS06750	0.26	-3.6
1,508,258	+		PFLU_RS06750	0.26	-2.8
1,508,258	+		PFLU_RS06750	0.26	-0.7
1,508,258	+		PFLU_RS06750	0.26	-0.6
1,508,258	+		PFLU_RS06750	0.26	-3.1
1,508,258	+		PFLU_RS06750	0.26	-0.5
1,508,258	+		PFLU_RS06750	0.26	-1.4
1,508,259	-		PFLU_RS06750	0.26	-0.4
1,508,259	-		PFLU_RS06750	0.26	-2.5
1,508,259	-		PFLU_RS06750	0.26	-2.4
1,508,259	-		PFLU_RS06750	0.26	-2.5
1,508,259	-		PFLU_RS06750	0.26	+0.6
1,508,259	-		PFLU_RS06750	0.26	-2.8
1,508,354	+		PFLU_RS06750	0.33	-1.5
1,508,354	+		PFLU_RS06750	0.33	-1.7
1,508,354	+		PFLU_RS06750	0.33	-0.7
1,508,354	+		PFLU_RS06750	0.33	-1.5
1,508,354	+		PFLU_RS06750	0.33	-2.3
1,508,354	+		PFLU_RS06750	0.33	-1.4
1,508,354	+		PFLU_RS06750	0.33	-1.2
1,508,354	+		PFLU_RS06750	0.33	-1.1
1,508,354	+		PFLU_RS06750	0.33	-2.0
1,508,354	+		PFLU_RS06750	0.33	-1.6
1,508,354	+		PFLU_RS06750	0.33	-1.0
1,508,354	+		PFLU_RS06750	0.33	-1.9
1,508,354	+		PFLU_RS06750	0.33	-0.8
1,508,354	+		PFLU_RS06750	0.33	-3.3
1,508,355	-		PFLU_RS06750	0.33	-2.8
1,508,355	-		PFLU_RS06750	0.33	-3.2
1,508,355	-		PFLU_RS06750	0.33	-2.1
1,508,355	-		PFLU_RS06750	0.33	-2.0
1,508,355	-		PFLU_RS06750	0.33	-1.4
1,508,355	-		PFLU_RS06750	0.33	-2.6
1,508,355	-		PFLU_RS06750	0.33	-2.1
1,508,355	-		PFLU_RS06750	0.33	-2.4
1,508,355	-		PFLU_RS06750	0.33	-3.0
1,508,355	-		PFLU_RS06750	0.33	-2.9
1,508,355	-		PFLU_RS06750	0.33	-1.0
1,508,355	-		PFLU_RS06750	0.33	-2.3
1,508,355	-		PFLU_RS06750	0.33	-1.0
1,508,355	-		PFLU_RS06750	0.33	-2.4
1,508,355	-		PFLU_RS06750	0.33	-2.5
1,508,408	+		PFLU_RS06750	0.37	-0.0
1,508,408	+		PFLU_RS06750	0.37	-0.4
1,508,408	+		PFLU_RS06750	0.37	-2.1
1,508,408	+		PFLU_RS06750	0.37	-3.4
1,508,638	+		PFLU_RS06750	0.55	-2.8
1,508,638	+		PFLU_RS06750	0.55	-1.4
1,508,639	-		PFLU_RS06750	0.55	-2.3
1,508,639	-		PFLU_RS06750	0.55	-3.8
1,508,639	-		PFLU_RS06750	0.55	-2.1
1,508,639	-		PFLU_RS06750	0.55	-2.0
1,508,693	+		PFLU_RS06750	0.59	-1.5
1,508,694	-		PFLU_RS06750	0.59	-3.2
1,508,694	-		PFLU_RS06750	0.59	-2.5
1,508,694	-		PFLU_RS06750	0.59	-2.3
1,508,694	-		PFLU_RS06750	0.59	-2.1
1,508,708	+		PFLU_RS06750	0.60	+0.2
1,508,708	+		PFLU_RS06750	0.60	-0.5
1,508,708	+		PFLU_RS06750	0.60	+0.1
1,508,708	+		PFLU_RS06750	0.60	+0.3
1,508,708	+		PFLU_RS06750	0.60	-0.3
1,508,708	+		PFLU_RS06750	0.60	+0.6
1,508,708	+		PFLU_RS06750	0.60	+0.0
1,508,708	+		PFLU_RS06750	0.60	+0.4
1,508,708	+		PFLU_RS06750	0.60	+0.2
1,508,708	+		PFLU_RS06750	0.60	+1.0
1,508,708	+		PFLU_RS06750	0.60	-0.4
1,508,708	+		PFLU_RS06750	0.60	-1.0
1,508,708	+		PFLU_RS06750	0.60	-0.7
1,508,708	+		PFLU_RS06750	0.60	-1.2
1,508,708	+		PFLU_RS06750	0.60	-1.5
1,508,708	+		PFLU_RS06750	0.60	+0.3
1,508,708	+		PFLU_RS06750	0.60	-0.5
1,508,708	+		PFLU_RS06750	0.60	-1.0
1,508,708	+		PFLU_RS06750	0.60	-1.4
1,508,708	+		PFLU_RS06750	0.60	+0.6
1,508,708	+		PFLU_RS06750	0.60	-0.7
1,508,709	-		PFLU_RS06750	0.60	-2.3
1,508,709	-		PFLU_RS06750	0.60	-0.7
1,508,709	-		PFLU_RS06750	0.60	-3.2
1,508,709	-		PFLU_RS06750	0.60	-2.8
1,508,709	-		PFLU_RS06750	0.60	-2.5
1,508,709	-		PFLU_RS06750	0.60	-2.3
1,508,709	-		PFLU_RS06750	0.60	-3.6
1,508,709	-		PFLU_RS06750	0.60	-2.4
1,508,709	-		PFLU_RS06750	0.60	-3.0
1,508,709	-		PFLU_RS06750	0.60	-3.8
1,508,709	-		PFLU_RS06750	0.60	-1.2
1,508,709	-		PFLU_RS06750	0.60	-1.0
1,508,709	-		PFLU_RS06750	0.60	-2.5
1,508,709	-		PFLU_RS06750	0.60	-2.4
1,508,709	-		PFLU_RS06750	0.60	-3.4
1,508,709	-		PFLU_RS06750	0.60	-2.6
1,508,709	-		PFLU_RS06750	0.60	-3.8
1,508,709	-		PFLU_RS06750	0.60	-2.8
1,508,709	-		PFLU_RS06750	0.60	-1.3
1,508,709	-		PFLU_RS06750	0.60	-2.7
1,508,709	-		PFLU_RS06750	0.60	-1.6
1,508,709	-		PFLU_RS06750	0.60	-3.0
1,508,709	-		PFLU_RS06750	0.60	-1.8
1,508,720	+		PFLU_RS06750	0.61	+0.6
1,508,720	+		PFLU_RS06750	0.61	-0.5
1,508,720	+		PFLU_RS06750	0.61	-0.4
1,508,720	+		PFLU_RS06750	0.61	-1.2
1,508,721	-		PFLU_RS06750	0.61	-2.9
1,508,721	-		PFLU_RS06750	0.61	-2.8
1,508,721	-		PFLU_RS06750	0.61	+1.6
1,508,721	-		PFLU_RS06750	0.61	-4.0
1,508,721	-		PFLU_RS06750	0.61	-2.2
1,508,721	-		PFLU_RS06750	0.61	-1.0
1,508,721	-		PFLU_RS06750	0.61	-1.4