Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS18940

Experiment: Glycerol 20 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Glycerol 20 mM (C)
4,283,027	-		PFLU_RS18935	0.35	+1.0
4,283,065	+		PFLU_RS18935	0.38	+0.5
4,283,065	+		PFLU_RS18935	0.38	+0.9
4,283,065	+		PFLU_RS18935	0.38	+1.2
4,283,065	+		PFLU_RS18935	0.38	-1.2
4,283,065	+		PFLU_RS18935	0.38	+0.8
4,283,066	-		PFLU_RS18935	0.38	-0.1
4,283,066	-		PFLU_RS18935	0.38	+0.0
4,283,108	+		PFLU_RS18935	0.41	-0.2
4,283,108	+		PFLU_RS18935	0.41	-0.3
4,283,108	+		PFLU_RS18935	0.41	+1.0
4,283,108	+		PFLU_RS18935	0.41	-0.2
4,283,135	+		PFLU_RS18935	0.43	-0.6
4,283,135	+		PFLU_RS18935	0.43	+0.2
4,283,135	+		PFLU_RS18935	0.43	-0.0
4,283,135	+		PFLU_RS18935	0.43	+0.3
4,283,135	+		PFLU_RS18935	0.43	-0.5
4,283,136	-		PFLU_RS18935	0.43	-0.6
4,283,136	-		PFLU_RS18935	0.43	+1.2
4,283,136	-		PFLU_RS18935	0.43	+0.1
4,283,157	+		PFLU_RS18935	0.44	+0.6
4,283,157	+		PFLU_RS18935	0.44	+1.4
4,283,158	-		PFLU_RS18935	0.45	+2.1
4,283,158	-		PFLU_RS18935	0.45	+0.1
4,283,158	-		PFLU_RS18935	0.45	+0.7
4,283,158	-		PFLU_RS18935	0.45	+1.2
4,283,158	-		PFLU_RS18935	0.45	+0.4
4,283,158	-		PFLU_RS18935	0.45	+0.6
4,283,273	+		PFLU_RS18935	0.53	-0.1
4,283,339	-		PFLU_RS18935	0.58	-0.2
4,283,387	+		PFLU_RS18935	0.62	-0.3
4,283,388	-		PFLU_RS18935	0.62	-1.2
4,283,388	-		PFLU_RS18935	0.62	-1.6
4,283,651	+		PFLU_RS18935	0.82	+0.1
4,283,651	+		PFLU_RS18935	0.82	-1.0
4,283,651	+		PFLU_RS18935	0.82	+0.2
4,283,651	+		PFLU_RS18935	0.82	+1.3
4,283,651	+		PFLU_RS18935	0.82	+1.0
4,283,651	+		PFLU_RS18935	0.82	+0.3
4,283,651	+		PFLU_RS18935	0.82	+1.0
4,283,651	+		PFLU_RS18935	0.82	-0.6
4,283,651	+		PFLU_RS18935	0.82	-1.2
4,283,651	+		PFLU_RS18935	0.82	-0.4
4,283,651	+		PFLU_RS18935	0.82	-0.8
4,283,652	-		PFLU_RS18935	0.82	-0.4
4,283,652	-		PFLU_RS18935	0.82	+1.0
4,283,652	-		PFLU_RS18935	0.82	+0.9
4,283,652	-		PFLU_RS18935	0.82	-3.2
4,283,652	-		PFLU_RS18935	0.82	-2.0
4,283,652	-		PFLU_RS18935	0.82	+0.2
4,283,652	-		PFLU_RS18935	0.82	+0.4
4,283,652	-		PFLU_RS18935	0.82	-0.1
4,283,652	-		PFLU_RS18935	0.82	-0.3
4,283,652	-		PFLU_RS18935	0.82	-0.2
4,283,652	-		PFLU_RS18935	0.82	-0.1
4,283,652	-		PFLU_RS18935	0.82	-0.6
4,283,652	-		PFLU_RS18935	0.82	-0.2
4,283,652	-		PFLU_RS18935	0.82	-0.7
4,283,653	+		PFLU_RS18935	0.82	-0.0
4,283,653	+		PFLU_RS18935	0.82	+0.0
4,283,653	+		PFLU_RS18935	0.82	+0.5
4,283,653	+		PFLU_RS18935	0.82	-1.9
4,283,653	+		PFLU_RS18935	0.82	+1.5
4,283,653	+		PFLU_RS18935	0.82	+0.4
4,283,653	+		PFLU_RS18935	0.82	+1.9
4,283,653	+		PFLU_RS18935	0.82	-0.8
4,283,653	+		PFLU_RS18935	0.82	+0.8
4,283,654	-		PFLU_RS18935	0.82	+1.0
4,283,654	-		PFLU_RS18935	0.82	-0.7
4,283,654	-		PFLU_RS18935	0.82	-0.1
4,283,654	-		PFLU_RS18935	0.82	+1.2
4,283,654	-		PFLU_RS18935	0.82	-0.2
4,283,655	+		PFLU_RS18935	0.82	+0.8
4,283,655	+		PFLU_RS18935	0.82	+0.8
4,283,655	+		PFLU_RS18935	0.82	+0.3
4,283,655	+		PFLU_RS18935	0.82	-1.0
4,283,656	-		PFLU_RS18935	0.82	+1.1
4,283,656	-		PFLU_RS18935	0.82	-0.4
4,283,656	-		PFLU_RS18935	0.82	-1.0
4,283,656	-		PFLU_RS18935	0.82	+0.1
4,283,656	-		PFLU_RS18935	0.82	-0.4
4,283,656	-		PFLU_RS18935	0.82	-0.7
4,283,656	-		PFLU_RS18935	0.82	+0.2
4,283,656	-		PFLU_RS18935	0.82	+1.5
4,283,736	+		PFLU_RS18935	0.88	+1.9
4,283,793	+				+0.5
4,283,794	-				-0.8
4,283,794	-				+0.3
4,283,843	-				-0.8
4,283,891	+				+0.5
4,283,891	+				+0.4
4,283,892	-				+0.6
4,284,043	+				-1.6
4,284,051	+				+1.3
4,284,051	+				+1.0
4,284,051	+				-0.0
4,284,051	+				-0.9
4,284,051	+				+1.3
4,284,051	+				+0.8
4,284,051	+				-0.1
4,284,051	+				+0.2
4,284,051	+				-0.6
4,284,051	+				-0.2
4,284,051	+				-0.6
4,284,051	+				+0.0
4,284,051	+				+0.5
4,284,051	+				-1.1
4,284,052	-				-2.4
4,284,052	-				+0.4
4,284,052	-				+0.3
4,284,052	-				-0.6
4,284,052	-				-0.6
4,284,052	-				-1.8
4,284,052	-				+0.8
4,284,052	-				-0.6
4,284,052	-				+0.6
4,284,052	-				+0.3
4,284,052	-				-1.1
4,284,052	-				-0.7
4,284,052	-				+1.1
4,284,135	+				+0.0
4,284,135	+				-1.2
4,284,135	+				-2.0
4,284,135	+				-1.2
4,284,135	+				-1.4
4,284,135	+				-1.8
4,284,135	+				-1.6
4,284,135	+				-1.8
4,284,135	+				-0.8
4,284,135	+				-1.7
4,284,135	+				-2.7
4,284,135	+				-0.5
4,284,135	+				-0.2
4,284,135	+				-1.6
4,284,135	+				+0.3
4,284,135	+				-0.2
4,284,135	+				-1.0
4,284,135	+				-0.2
4,284,135	+				-0.8
4,284,135	+				-0.8
4,284,135	+				-3.6
4,284,135	+				-2.2
4,284,135	+				-1.8
4,284,135	+				-1.6
4,284,135	+				-0.8
4,284,135	+				-0.8
4,284,136	-				-0.8
4,284,136	-				-1.2
4,284,136	-				-0.8
4,284,136	-				-3.4
4,284,136	-				-1.6
4,284,136	-				-1.7
4,284,136	-				-3.0
4,284,136	-				-1.2
4,284,136	-				-2.0
4,284,136	-				-2.8
4,284,136	-				-0.6
4,284,136	-				-0.9
4,284,136	-				-0.8
4,284,136	-				-2.6
4,284,136	-				+0.0
4,284,136	-				-1.6
4,284,136	-				-1.6
4,284,136	-				+0.4
4,284,136	-				+0.8
4,284,136	-				-0.8
4,284,136	-				+0.2
4,284,136	-				-1.8
4,284,136	-				-2.4
4,284,136	-				-1.2
4,284,136	-				-1.0
4,284,136	-				-1.0
4,284,141	+		PFLU_RS18940	0.10	-0.2
4,284,141	+		PFLU_RS18940	0.10	-1.2
4,284,141	+		PFLU_RS18940	0.10	-2.7
4,284,141	+		PFLU_RS18940	0.10	-1.0
4,284,141	+		PFLU_RS18940	0.10	-0.2
4,284,141	+		PFLU_RS18940	0.10	-3.8
4,284,141	+		PFLU_RS18940	0.10	-1.6
4,284,141	+		PFLU_RS18940	0.10	-2.0
4,284,141	+		PFLU_RS18940	0.10	-1.6
4,284,141	+		PFLU_RS18940	0.10	-0.4
4,284,142	-		PFLU_RS18940	0.10	-0.8
4,284,142	-		PFLU_RS18940	0.10	-1.6
4,284,142	-		PFLU_RS18940	0.10	+0.8
4,284,142	-		PFLU_RS18940	0.10	-2.0
4,284,142	-		PFLU_RS18940	0.10	+0.8
4,284,142	-		PFLU_RS18940	0.10	-0.9
4,284,142	-		PFLU_RS18940	0.10	-0.0
4,284,142	-		PFLU_RS18940	0.10	-0.6
4,284,142	-		PFLU_RS18940	0.10	-1.5
4,284,142	-		PFLU_RS18940	0.10	-1.5
4,284,142	-		PFLU_RS18940	0.10	+0.2
4,284,142	-		PFLU_RS18940	0.10	-0.6
4,284,142	-		PFLU_RS18940	0.10	-0.0
4,284,142	-		PFLU_RS18940	0.10	-0.8
4,284,142	-		PFLU_RS18940	0.10	-1.2
4,284,142	-		PFLU_RS18940	0.10	-0.8
4,284,142	-		PFLU_RS18940	0.10	-3.3
4,284,215	+		PFLU_RS18940	0.16	+0.8
4,284,216	-		PFLU_RS18940	0.16	+0.2
4,284,216	-		PFLU_RS18940	0.16	-1.6
4,284,216	-		PFLU_RS18940	0.16	+1.8
4,284,216	-		PFLU_RS18940	0.16	-1.8
4,284,216	-		PFLU_RS18940	0.16	-3.7
4,284,216	-		PFLU_RS18940	0.16	-2.6
4,284,288	+		PFLU_RS18940	0.22	-0.2
4,284,288	+		PFLU_RS18940	0.22	-1.0
4,284,288	+		PFLU_RS18940	0.22	-1.2
4,284,288	+		PFLU_RS18940	0.22	-1.2
4,284,288	+		PFLU_RS18940	0.22	-0.8
4,284,288	+		PFLU_RS18940	0.22	-2.1
4,284,288	+		PFLU_RS18940	0.22	-2.3
4,284,288	+		PFLU_RS18940	0.22	-2.6
4,284,288	+		PFLU_RS18940	0.22	+0.8
4,284,288	+		PFLU_RS18940	0.22	-2.8
4,284,288	+		PFLU_RS18940	0.22	-2.2
4,284,289	-		PFLU_RS18940	0.22	-0.8
4,284,289	-		PFLU_RS18940	0.22	-0.5
4,284,289	-		PFLU_RS18940	0.22	-2.2
4,284,289	-		PFLU_RS18940	0.22	-1.9
4,284,395	-		PFLU_RS18940	0.31	-1.0
4,284,538	-		PFLU_RS18940	0.42	-1.5
4,284,538	-		PFLU_RS18940	0.42	-0.8
4,284,548	+		PFLU_RS18940	0.43	-1.0
4,284,548	+		PFLU_RS18940	0.43	-0.8
4,284,548	+		PFLU_RS18940	0.43	+0.8
4,284,548	+		PFLU_RS18940	0.43	-2.2
4,284,548	+		PFLU_RS18940	0.43	-1.8
4,284,548	+		PFLU_RS18940	0.43	-1.2
4,284,548	+		PFLU_RS18940	0.43	-2.2
4,284,548	+		PFLU_RS18940	0.43	-1.6
4,284,548	+		PFLU_RS18940	0.43	-2.0
4,284,548	+		PFLU_RS18940	0.43	+0.3
4,284,548	+		PFLU_RS18940	0.43	-3.2
4,284,549	-		PFLU_RS18940	0.43	-2.0
4,284,549	-		PFLU_RS18940	0.43	-0.5
4,284,549	-		PFLU_RS18940	0.43	-2.6
4,284,549	-		PFLU_RS18940	0.43	-1.2
4,284,549	-		PFLU_RS18940	0.43	-0.6
4,284,549	-		PFLU_RS18940	0.43	-2.9
4,284,549	-		PFLU_RS18940	0.43	-1.6
4,284,549	-		PFLU_RS18940	0.43	-0.6
4,284,915	+		PFLU_RS18940	0.73	-2.7
4,285,014	+		PFLU_RS18940	0.81	-2.2
4,285,015	-		PFLU_RS18940	0.81	-2.4
4,285,015	-		PFLU_RS18940	0.81	-3.0
4,285,179	+				-0.6
4,285,179	+				-1.2
4,285,179	+				-1.2
4,285,179	+				-1.6
4,285,179	+				-2.6
4,285,179	+				-2.0
4,285,179	+				+2.3
4,285,180	-				-2.2
4,285,180	-				-2.4
4,285,180	-				-2.7
4,285,180	-				+1.2
4,285,180	-				-2.2
4,285,180	-				-0.2
4,285,180	-				-2.0
4,285,180	-				-0.8
4,285,180	-				-3.0
4,285,180	-				-1.6
4,285,233	+				-1.0
4,285,233	+				-2.9
4,285,233	+				-1.2
4,285,275	+				-3.6
4,285,275	+				-2.7
4,285,275	+				-1.8
4,285,275	+				-3.0
4,285,275	+				-2.0
4,285,275	+				-0.8
4,285,275	+				-1.8
4,285,275	+				-2.4
4,285,275	+				-1.6
4,285,275	+				-2.0
4,285,275	+				-1.8
4,285,275	+				-0.7
4,285,275	+				-3.5
4,285,276	-				+1.0
4,285,276	-				+1.1
4,285,276	-				+0.2
4,285,276	-				+1.8
4,285,276	-				-0.8
4,285,276	-				-0.2
4,285,276	-				-0.0
4,285,276	-				+0.4
4,285,276	-				+0.2
4,285,294	+				-2.4
4,285,294	+				-3.9
4,285,294	+				-1.6
4,285,294	+				+0.4
4,285,294	+				+0.3
4,285,294	+				+0.8
4,285,294	+				-1.0
4,285,294	+				-2.6
4,285,294	+				+0.0
4,285,295	-				-0.2
4,285,295	-				+0.2
4,285,295	-				+0.1
4,285,295	-				-0.6
4,285,295	-				+0.8
4,285,295	-				+0.8
4,285,308	+				-3.2
4,285,317	+				-1.9
4,285,323	-				+1.3
4,285,336	-				+1.5
4,285,336	-				-1.4
4,285,338	+				-1.5
4,285,354	+				-2.2
4,285,354	+				-1.8
4,285,354	+				-2.6
4,285,355	-				-0.1
4,285,355	-				+0.3
4,285,356	+				-0.7
4,285,356	+				-0.2
4,285,356	+				-1.8
4,285,356	+				-2.0
4,285,357	-				+0.4
4,285,367	+				-3.5
4,285,367	+				-2.0
4,285,367	+				-2.5
4,285,367	+				-0.7
4,285,367	+				-0.2
4,285,367	+				-2.2
4,285,368	-				+0.2
4,285,368	-				-0.7
4,285,368	-				+0.0
4,285,368	-				+0.4
4,285,368	-				-1.5
4,285,368	-				+0.3
4,285,368	-				+0.2
4,285,377	+				-2.6
4,285,377	+				-1.6
4,285,377	+				-2.1
4,285,377	+				-3.1
4,285,377	+				-1.2
4,285,377	+				-1.2
4,285,378	-				+0.2
4,285,378	-				-0.1
4,285,378	-				-1.1
4,285,378	-				-0.9
4,285,378	-				+1.7
4,285,378	-				-0.6
4,285,383	+				-0.4
4,285,383	+				+0.6
4,285,383	+				+0.4
4,285,383	+				-1.2
4,285,383	+				-0.6
4,285,383	+				-0.0
4,285,383	+				+0.2
4,285,383	+				+0.5
4,285,383	+				-1.0
4,285,383	+				-1.8
4,285,383	+				-0.4
4,285,383	+				-0.8
4,285,383	+				+0.5
4,285,383	+				-1.4
4,285,383	+				-0.4
4,285,383	+				+0.7
4,285,384	-				+0.3
4,285,384	-				+0.0
4,285,384	-				-0.5
4,285,384	-				-0.2
4,285,384	-				-0.1
4,285,384	-				+0.8
4,285,384	-				-0.6
4,285,384	-				+0.3
4,285,384	-				-1.0
4,285,384	-				+0.3
4,285,384	-				-0.2
4,285,384	-				-0.9
4,285,384	-				-0.6
4,285,392	+				-2.6
4,285,393	-				+0.3
4,285,393	-				+0.1
4,285,393	-				+0.1
4,285,431	-				+0.8
4,285,449	+				-0.6
4,285,449	+				+0.2
4,285,449	+				+0.2
4,285,649	-		PFLU_RS18945	0.27	-0.5
4,285,692	+		PFLU_RS18945	0.31	+0.3
4,285,692	+		PFLU_RS18945	0.31	+0.6
4,285,693	-		PFLU_RS18945	0.32	+0.2
4,285,693	-		PFLU_RS18945	0.32	+0.1
4,285,908	+		PFLU_RS18945	0.54	-0.8
4,285,908	+		PFLU_RS18945	0.54	+1.3
4,285,908	+		PFLU_RS18945	0.54	+0.4
4,285,908	+		PFLU_RS18945	0.54	+0.2
4,285,971	+		PFLU_RS18945	0.61	+1.3
4,285,971	+		PFLU_RS18945	0.61	-0.1
4,285,971	+		PFLU_RS18945	0.61	+1.0
4,285,971	+		PFLU_RS18945	0.61	+1.3
4,285,971	+		PFLU_RS18945	0.61	+0.3
4,285,971	+		PFLU_RS18945	0.61	-0.5
4,285,972	-		PFLU_RS18945	0.61	-1.0
4,285,988	+		PFLU_RS18945	0.63	+1.1
4,285,989	-		PFLU_RS18945	0.63	+0.6
4,285,989	-		PFLU_RS18945	0.63	+0.2
4,285,994	+		PFLU_RS18945	0.64	-0.2
4,285,994	+		PFLU_RS18945	0.64	+0.3
4,285,994	+		PFLU_RS18945	0.64	-0.2
4,285,995	-		PFLU_RS18945	0.64	-1.2
4,285,995	-		PFLU_RS18945	0.64	+0.4
4,285,995	-		PFLU_RS18945	0.64	-0.7
4,285,995	-		PFLU_RS18945	0.64	+1.4
4,285,995	-		PFLU_RS18945	0.64	+0.3
4,285,995	-		PFLU_RS18945	0.64	+0.3
4,285,995	-		PFLU_RS18945	0.64	+0.4
4,286,085	+		PFLU_RS18945	0.73	+0.3
4,286,085	+		PFLU_RS18945	0.73	+0.1
4,286,085	+		PFLU_RS18945	0.73	+0.7
4,286,085	+		PFLU_RS18945	0.73	+0.1
4,286,086	-		PFLU_RS18945	0.74	-1.2
4,286,086	-		PFLU_RS18945	0.74	-0.2
4,286,086	-		PFLU_RS18945	0.74	-0.5
4,286,086	-		PFLU_RS18945	0.74	+0.5
4,286,086	-		PFLU_RS18945	0.74	+0.2
4,286,086	-		PFLU_RS18945	0.74	+0.2
4,286,086	-		PFLU_RS18945	0.74	+0.8
4,286,086	-		PFLU_RS18945	0.74	+1.5
4,286,217	+		PFLU_RS18945	0.88	-0.7
4,286,217	+		PFLU_RS18945	0.88	-0.0
4,286,218	-		PFLU_RS18945	0.88	+0.2
4,286,218	-		PFLU_RS18945	0.88	+0.1