Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS29770

Experiment: Citraconic 20 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Citraconic 20 mM (C)
6,616,010	+		PFLU_RS29765	0.62	-1.6
6,616,010	+		PFLU_RS29765	0.62	-0.0
6,616,010	+		PFLU_RS29765	0.62	-3.3
6,616,011	-		PFLU_RS29765	0.62	+0.0
6,616,076	+		PFLU_RS29765	0.65	-0.5
6,616,076	+		PFLU_RS29765	0.65	-0.7
6,616,076	+		PFLU_RS29765	0.65	-1.7
6,616,076	+		PFLU_RS29765	0.65	-2.7
6,616,076	+		PFLU_RS29765	0.65	-1.8
6,616,076	+		PFLU_RS29765	0.65	-1.0
6,616,076	+		PFLU_RS29765	0.65	-3.4
6,616,076	+		PFLU_RS29765	0.65	-1.8
6,616,076	+		PFLU_RS29765	0.65	-1.9
6,616,076	+		PFLU_RS29765	0.65	-0.2
6,616,076	+		PFLU_RS29765	0.65	+0.7
6,616,076	+		PFLU_RS29765	0.65	-1.9
6,616,076	+		PFLU_RS29765	0.65	-0.7
6,616,077	-		PFLU_RS29765	0.65	-1.6
6,616,077	-		PFLU_RS29765	0.65	-2.2
6,616,077	-		PFLU_RS29765	0.65	-1.0
6,616,077	-		PFLU_RS29765	0.65	-2.5
6,616,077	-		PFLU_RS29765	0.65	-0.7
6,616,077	-		PFLU_RS29765	0.65	-2.0
6,616,077	-		PFLU_RS29765	0.65	+0.1
6,616,077	-		PFLU_RS29765	0.65	-1.4
6,616,077	-		PFLU_RS29765	0.65	-1.6
6,616,077	-		PFLU_RS29765	0.65	-0.6
6,616,077	-		PFLU_RS29765	0.65	-1.2
6,616,077	-		PFLU_RS29765	0.65	-2.0
6,616,214	+		PFLU_RS29765	0.71	-1.2
6,616,214	+		PFLU_RS29765	0.71	+0.0
6,616,214	+		PFLU_RS29765	0.71	-0.4
6,616,319	+		PFLU_RS29765	0.76	-3.5
6,616,374	+		PFLU_RS29765	0.78	-2.3
6,616,374	+		PFLU_RS29765	0.78	-2.7
6,616,374	+		PFLU_RS29765	0.78	-2.2
6,616,374	+		PFLU_RS29765	0.78	-0.3
6,616,374	+		PFLU_RS29765	0.78	-1.9
6,616,374	+		PFLU_RS29765	0.78	-3.0
6,616,374	+		PFLU_RS29765	0.78	-1.8
6,616,374	+		PFLU_RS29765	0.78	-0.6
6,616,375	-		PFLU_RS29765	0.78	-0.9
6,616,375	-		PFLU_RS29765	0.78	-2.3
6,616,375	-		PFLU_RS29765	0.78	-0.3
6,616,375	-		PFLU_RS29765	0.78	+0.2
6,616,375	-		PFLU_RS29765	0.78	-1.0
6,616,375	-		PFLU_RS29765	0.78	+0.4
6,616,375	-		PFLU_RS29765	0.78	-1.9
6,616,375	-		PFLU_RS29765	0.78	-1.1
6,616,375	-		PFLU_RS29765	0.78	-0.6
6,616,375	-		PFLU_RS29765	0.78	-1.9
6,616,375	-		PFLU_RS29765	0.78	-1.4
6,616,375	-		PFLU_RS29765	0.78	-0.4
6,616,376	+		PFLU_RS29765	0.78	-0.5
6,616,376	+		PFLU_RS29765	0.78	-1.9
6,616,376	+		PFLU_RS29765	0.78	-2.5
6,616,376	+		PFLU_RS29765	0.78	-2.5
6,616,376	+		PFLU_RS29765	0.78	-2.5
6,616,376	+		PFLU_RS29765	0.78	+0.0
6,616,376	+		PFLU_RS29765	0.78	-2.1
6,616,376	+		PFLU_RS29765	0.78	-0.3
6,616,376	+		PFLU_RS29765	0.78	-1.3
6,616,376	+		PFLU_RS29765	0.78	-3.3
6,616,376	+		PFLU_RS29765	0.78	-2.9
6,616,376	+		PFLU_RS29765	0.78	-0.9
6,616,376	+		PFLU_RS29765	0.78	-2.6
6,616,376	+		PFLU_RS29765	0.78	-2.7
6,616,376	+		PFLU_RS29765	0.78	-1.2
6,616,376	+		PFLU_RS29765	0.78	-2.9
6,616,376	+		PFLU_RS29765	0.78	-2.5
6,616,376	+		PFLU_RS29765	0.78	-1.3
6,616,376	+		PFLU_RS29765	0.78	-0.7
6,616,376	+		PFLU_RS29765	0.78	-0.8
6,616,376	+		PFLU_RS29765	0.78	-3.8
6,616,376	+		PFLU_RS29765	0.78	-2.4
6,616,376	+		PFLU_RS29765	0.78	-1.6
6,616,376	+		PFLU_RS29765	0.78	-0.2
6,616,376	+		PFLU_RS29765	0.78	-2.8
6,616,376	+		PFLU_RS29765	0.78	-0.7
6,616,376	+		PFLU_RS29765	0.78	-0.3
6,616,376	+		PFLU_RS29765	0.78	-1.7
6,616,376	+		PFLU_RS29765	0.78	+0.3
6,616,376	+		PFLU_RS29765	0.78	-0.7
6,616,376	+		PFLU_RS29765	0.78	-0.7
6,616,376	+		PFLU_RS29765	0.78	-1.9
6,616,376	+		PFLU_RS29765	0.78	-1.2
6,616,376	+		PFLU_RS29765	0.78	-2.2
6,616,376	+		PFLU_RS29765	0.78	-2.0
6,616,376	+		PFLU_RS29765	0.78	-1.2
6,616,376	+		PFLU_RS29765	0.78	-1.2
6,616,376	+		PFLU_RS29765	0.78	-3.0
6,616,376	+		PFLU_RS29765	0.78	-0.1
6,616,377	-		PFLU_RS29765	0.78	-2.0
6,616,377	-		PFLU_RS29765	0.78	-1.3
6,616,377	-		PFLU_RS29765	0.78	+0.0
6,616,377	-		PFLU_RS29765	0.78	-1.1
6,616,377	-		PFLU_RS29765	0.78	-1.9
6,616,377	-		PFLU_RS29765	0.78	-1.6
6,616,377	-		PFLU_RS29765	0.78	-1.7
6,616,377	-		PFLU_RS29765	0.78	-3.6
6,616,377	-		PFLU_RS29765	0.78	-1.4
6,616,377	-		PFLU_RS29765	0.78	+1.1
6,616,377	-		PFLU_RS29765	0.78	-2.7
6,616,377	-		PFLU_RS29765	0.78	-2.7
6,616,377	-		PFLU_RS29765	0.78	-1.1
6,616,377	-		PFLU_RS29765	0.78	-1.2
6,616,377	-		PFLU_RS29765	0.78	-1.1
6,616,377	-		PFLU_RS29765	0.78	-1.6
6,616,377	-		PFLU_RS29765	0.78	-0.9
6,616,377	-		PFLU_RS29765	0.78	-1.3
6,616,377	-		PFLU_RS29765	0.78	-0.6
6,616,377	-		PFLU_RS29765	0.78	-1.6
6,616,377	-		PFLU_RS29765	0.78	-1.6
6,616,377	-		PFLU_RS29765	0.78	-2.3
6,616,377	-		PFLU_RS29765	0.78	-1.9
6,616,377	-		PFLU_RS29765	0.78	+1.0
6,616,377	-		PFLU_RS29765	0.78	+0.3
6,616,377	-		PFLU_RS29765	0.78	-3.1
6,616,377	-		PFLU_RS29765	0.78	-2.2
6,616,377	-		PFLU_RS29765	0.78	-2.9
6,616,377	-		PFLU_RS29765	0.78	-1.7
6,616,377	-		PFLU_RS29765	0.78	-1.7
6,616,380	+		PFLU_RS29765	0.79	-0.5
6,616,380	+		PFLU_RS29765	0.79	+0.1
6,616,380	+		PFLU_RS29765	0.79	-2.4
6,616,380	+		PFLU_RS29765	0.79	-2.0
6,616,380	+		PFLU_RS29765	0.79	-0.6
6,616,380	+		PFLU_RS29765	0.79	-1.4
6,616,380	+		PFLU_RS29765	0.79	-0.4
6,616,381	-		PFLU_RS29765	0.79	-1.1
6,616,381	-		PFLU_RS29765	0.79	-0.4
6,616,381	-		PFLU_RS29765	0.79	-0.6
6,616,381	-		PFLU_RS29765	0.79	-0.4
6,616,453	+		PFLU_RS29765	0.82	-2.8
6,616,453	+		PFLU_RS29765	0.82	-1.9
6,616,453	+		PFLU_RS29765	0.82	-1.9
6,616,453	+		PFLU_RS29765	0.82	-0.6
6,616,453	+		PFLU_RS29765	0.82	-1.1
6,616,454	-		PFLU_RS29765	0.82	-3.2
6,616,454	-		PFLU_RS29765	0.82	-0.8
6,616,454	-		PFLU_RS29765	0.82	-1.3
6,616,682	+				-1.5
6,616,682	+				+0.6
6,616,682	+				-1.7
6,616,682	+				-1.4
6,616,682	+				-1.0
6,616,683	-				-1.3
6,616,683	-				-1.7
6,616,683	-				-2.1
6,616,683	-				+0.0
6,616,683	-				-2.9
6,616,683	-				-0.6
6,616,683	-				-3.1
6,616,683	-				-1.3
6,616,745	+				-1.3
6,616,745	+				-3.3
6,616,745	+				-3.5
6,616,745	+				-0.9
6,616,745	+				-0.8
6,616,745	+				-0.6
6,616,745	+				-1.4
6,616,745	+				+1.0
6,616,745	+				-0.6
6,616,745	+				-1.0
6,616,745	+				-1.4
6,616,745	+				-2.8
6,616,745	+				-1.6
6,616,745	+				-2.4
6,616,745	+				-2.4
6,616,745	+				-0.9
6,616,745	+				-0.2
6,616,746	-				-0.4
6,616,746	-				+0.4
6,616,746	-				+0.0
6,616,746	-				-1.1
6,616,746	-				-1.6
6,616,746	-				-1.0
6,616,746	-				-2.2
6,616,746	-				-1.3
6,616,746	-				-0.7
6,616,746	-				-1.1
6,616,746	-				-1.2
6,616,746	-				-1.4
6,616,746	-				-0.1
6,616,746	-				-1.2
6,616,746	-				-0.5
6,616,746	-				+0.4
6,616,746	-				+0.4
6,616,746	-				-1.9
6,616,746	-				-1.1
6,616,746	-				+0.2
6,616,806	+				-2.9
6,616,806	+				-2.5
6,616,807	-				-0.7
6,616,880	+				-1.2
6,616,881	-				+1.8
6,616,891	+				+0.4
6,616,891	+				-0.3
6,616,892	-				+0.6
6,617,069	+				-1.1
6,617,069	+				-0.5
6,617,069	+				-1.9
6,617,069	+				+1.1
6,617,069	+				-1.2
6,617,069	+				-2.6
6,617,069	+				+0.0
6,617,069	+				-1.0
6,617,069	+				-0.0
6,617,069	+				-1.4
6,617,070	-				-0.4
6,617,070	-				-1.3
6,617,070	-				+0.7
6,617,070	-				-1.0
6,617,171	+		PFLU_RS29770	0.17	-0.2
6,617,171	+		PFLU_RS29770	0.17	-1.4
6,617,171	+		PFLU_RS29770	0.17	-1.0
6,617,171	+		PFLU_RS29770	0.17	-1.2
6,617,171	+		PFLU_RS29770	0.17	-1.6
6,617,171	+		PFLU_RS29770	0.17	+0.4
6,617,172	-		PFLU_RS29770	0.17	-1.7
6,617,172	-		PFLU_RS29770	0.17	+0.5
6,617,172	-		PFLU_RS29770	0.17	-0.7
6,617,172	-		PFLU_RS29770	0.17	-1.0
6,617,172	-		PFLU_RS29770	0.17	+0.1
6,617,172	-		PFLU_RS29770	0.17	-0.6
6,617,177	+		PFLU_RS29770	0.18	-1.3
6,617,177	+		PFLU_RS29770	0.18	-1.4
6,617,177	+		PFLU_RS29770	0.18	-0.7
6,617,177	+		PFLU_RS29770	0.18	-3.0
6,617,178	-		PFLU_RS29770	0.18	-1.6
6,617,178	-		PFLU_RS29770	0.18	-3.0
6,617,178	-		PFLU_RS29770	0.18	-2.2
6,617,178	-		PFLU_RS29770	0.18	+0.1
6,617,178	-		PFLU_RS29770	0.18	-0.8
6,617,178	-		PFLU_RS29770	0.18	-3.3
6,617,178	-		PFLU_RS29770	0.18	-1.2
6,617,198	+		PFLU_RS29770	0.20	-0.2
6,617,198	+		PFLU_RS29770	0.20	-1.9
6,617,198	+		PFLU_RS29770	0.20	-0.4
6,617,199	-		PFLU_RS29770	0.20	-2.2
6,617,199	-		PFLU_RS29770	0.20	-2.3
6,617,291	+		PFLU_RS29770	0.29	-1.0
6,617,384	+		PFLU_RS29770	0.39	-1.0
6,617,384	+		PFLU_RS29770	0.39	-1.3
6,617,384	+		PFLU_RS29770	0.39	-1.2
6,617,384	+		PFLU_RS29770	0.39	-1.7
6,617,384	+		PFLU_RS29770	0.39	+0.0
6,617,385	-		PFLU_RS29770	0.39	-1.4
6,617,385	-		PFLU_RS29770	0.39	-1.9
6,617,385	-		PFLU_RS29770	0.39	-0.7
6,617,385	-		PFLU_RS29770	0.39	-1.2
6,617,385	-		PFLU_RS29770	0.39	-2.4
6,617,385	-		PFLU_RS29770	0.39	+1.6
6,617,417	+		PFLU_RS29770	0.42	+0.5
6,617,417	+		PFLU_RS29770	0.42	-0.4
6,617,417	+		PFLU_RS29770	0.42	-2.7
6,617,418	-		PFLU_RS29770	0.42	-0.2
6,617,418	-		PFLU_RS29770	0.42	-0.7
6,617,423	+		PFLU_RS29770	0.43	-1.0
6,617,423	+		PFLU_RS29770	0.43	-1.7
6,617,423	+		PFLU_RS29770	0.43	-0.7
6,617,423	+		PFLU_RS29770	0.43	-0.6
6,617,424	-		PFLU_RS29770	0.43	-2.2
6,617,424	-		PFLU_RS29770	0.43	-3.3
6,617,424	-		PFLU_RS29770	0.43	-0.1
6,617,424	-		PFLU_RS29770	0.43	-1.4
6,617,424	-		PFLU_RS29770	0.43	-3.0
6,617,424	-		PFLU_RS29770	0.43	-1.1
6,617,424	-		PFLU_RS29770	0.43	+0.3
6,617,424	-		PFLU_RS29770	0.43	-1.4
6,617,424	-		PFLU_RS29770	0.43	-0.7
6,617,442	+		PFLU_RS29770	0.45	-2.7
6,617,443	-		PFLU_RS29770	0.45	-1.1
6,617,520	+		PFLU_RS29770	0.52	-0.4
6,617,648	+		PFLU_RS29770	0.65	-1.7
6,617,648	+		PFLU_RS29770	0.65	-0.0
6,617,648	+		PFLU_RS29770	0.65	-0.7
6,617,649	-		PFLU_RS29770	0.66	-2.7
6,617,654	+		PFLU_RS29770	0.66	-1.2
6,617,654	+		PFLU_RS29770	0.66	-1.9
6,617,654	+		PFLU_RS29770	0.66	-1.0
6,617,654	+		PFLU_RS29770	0.66	-1.6
6,617,654	+		PFLU_RS29770	0.66	-0.7
6,617,654	+		PFLU_RS29770	0.66	+0.2
6,617,654	+		PFLU_RS29770	0.66	+0.6
6,617,654	+		PFLU_RS29770	0.66	-2.1
6,617,655	-		PFLU_RS29770	0.66	+1.2
6,617,655	-		PFLU_RS29770	0.66	-1.1
6,617,655	-		PFLU_RS29770	0.66	-2.2
6,617,655	-		PFLU_RS29770	0.66	+0.9
6,617,789	+		PFLU_RS29770	0.80	-1.1
6,617,789	+		PFLU_RS29770	0.80	+0.6
6,617,801	+		PFLU_RS29770	0.81	+0.3
6,617,829	+		PFLU_RS29770	0.84	-2.0
6,617,829	+		PFLU_RS29770	0.84	-1.2
6,617,839	-		PFLU_RS29770	0.85	-0.8
6,617,883	+		PFLU_RS29770	0.89	+0.4
6,617,884	-		PFLU_RS29770	0.89	-2.1
6,617,888	+		PFLU_RS29770	0.90	-1.7
6,617,888	+		PFLU_RS29770	0.90	-0.6
6,617,888	+		PFLU_RS29770	0.90	+0.9
6,617,888	+		PFLU_RS29770	0.90	-1.1
6,617,888	+		PFLU_RS29770	0.90	-1.0
6,617,889	-		PFLU_RS29770	0.90	-0.3
6,617,889	-		PFLU_RS29770	0.90	-1.9
6,617,889	-		PFLU_RS29770	0.90	-1.4
6,617,889	-		PFLU_RS29770	0.90	-1.1
6,617,889	-		PFLU_RS29770	0.90	+0.4
6,617,889	-		PFLU_RS29770	0.90	-1.6
6,617,889	-		PFLU_RS29770	0.90	-1.9
6,618,000	-				+0.9
6,618,000	-				+0.9
6,618,000	-				+1.9
6,618,006	+				+1.6
6,618,006	+				+1.4
6,618,006	+				+1.8
6,618,006	+				+1.4
6,618,007	-				+0.5
6,618,007	-				-0.1
6,618,007	-				+0.8
6,618,012	+				+1.4
6,618,012	+				+1.9
6,618,012	+				+1.4
6,618,012	+				+0.7
6,618,012	+				+0.0
6,618,012	+				+1.1
6,618,012	+				+1.5
6,618,012	+				+1.3
6,618,012	+				+1.0
6,618,013	-				-0.4
6,618,013	-				+0.4
6,618,013	-				-0.4
6,618,013	-				+0.6
6,618,013	-				-0.7
6,618,013	-				-0.1
6,618,013	-				+1.6
6,618,031	+				+1.2
6,618,032	-				+0.8
6,618,032	-				+0.5
6,618,055	+				+1.4
6,618,055	+				+0.0
6,618,055	+				+1.4
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