Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS20585

Experiment: Citraconic 20 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Citraconic 20 mM (C)
4,635,322	+		PFLU_RS20580	0.48	-1.3
4,635,322	+		PFLU_RS20580	0.48	-2.0
4,635,322	+		PFLU_RS20580	0.48	-3.2
4,635,322	+		PFLU_RS20580	0.48	-4.0
4,635,323	-		PFLU_RS20580	0.48	-3.5
4,635,323	-		PFLU_RS20580	0.48	-3.8
4,635,323	-		PFLU_RS20580	0.48	-3.1
4,635,323	-		PFLU_RS20580	0.48	-2.0
4,635,323	-		PFLU_RS20580	0.48	-3.8
4,635,323	-		PFLU_RS20580	0.48	-4.1
4,635,470	+		PFLU_RS20580	0.58	-1.5
4,635,551	+		PFLU_RS20580	0.64	-0.1
4,635,551	+		PFLU_RS20580	0.64	-1.5
4,635,551	+		PFLU_RS20580	0.64	-1.6
4,635,551	+		PFLU_RS20580	0.64	-1.7
4,635,551	+		PFLU_RS20580	0.64	-2.0
4,635,551	+		PFLU_RS20580	0.64	-2.7
4,635,551	+		PFLU_RS20580	0.64	-2.5
4,635,551	+		PFLU_RS20580	0.64	-3.3
4,635,551	+		PFLU_RS20580	0.64	-2.6
4,635,551	+		PFLU_RS20580	0.64	-1.5
4,635,551	+		PFLU_RS20580	0.64	-2.5
4,635,551	+		PFLU_RS20580	0.64	-3.1
4,635,551	+		PFLU_RS20580	0.64	-1.5
4,635,551	+		PFLU_RS20580	0.64	-2.8
4,635,551	+		PFLU_RS20580	0.64	-3.2
4,635,551	+		PFLU_RS20580	0.64	-3.6
4,635,551	+		PFLU_RS20580	0.64	-2.5
4,635,552	-		PFLU_RS20580	0.64	-2.7
4,635,552	-		PFLU_RS20580	0.64	-1.1
4,635,552	-		PFLU_RS20580	0.64	-2.3
4,635,552	-		PFLU_RS20580	0.64	-2.0
4,635,552	-		PFLU_RS20580	0.64	-3.3
4,635,552	-		PFLU_RS20580	0.64	-2.5
4,635,552	-		PFLU_RS20580	0.64	-1.5
4,635,552	-		PFLU_RS20580	0.64	-2.8
4,635,552	-		PFLU_RS20580	0.64	-4.1
4,635,552	-		PFLU_RS20580	0.64	-1.7
4,635,552	-		PFLU_RS20580	0.64	-2.0
4,635,552	-		PFLU_RS20580	0.64	-3.1
4,635,552	-		PFLU_RS20580	0.64	-2.3
4,635,552	-		PFLU_RS20580	0.64	-3.2
4,635,552	-		PFLU_RS20580	0.64	-2.6
4,635,552	-		PFLU_RS20580	0.64	-2.5
4,635,552	-		PFLU_RS20580	0.64	+0.9
4,635,770	-		PFLU_RS20580	0.79	-4.1
4,635,770	-		PFLU_RS20580	0.79	-2.3
4,635,781	+		PFLU_RS20580	0.80	-2.0
4,635,781	+		PFLU_RS20580	0.80	-3.3
4,635,781	+		PFLU_RS20580	0.80	-2.0
4,635,782	-		PFLU_RS20580	0.80	-1.1
4,635,864	+		PFLU_RS20580	0.86	-2.1
4,635,864	+		PFLU_RS20580	0.86	-1.7
4,635,864	+		PFLU_RS20580	0.86	-1.1
4,635,864	+		PFLU_RS20580	0.86	-3.1
4,635,865	-		PFLU_RS20580	0.86	-3.3
4,635,865	-		PFLU_RS20580	0.86	-3.1
4,635,982	+				-3.5
4,635,982	+				-1.5
4,635,982	+				-2.1
4,635,982	+				-1.7
4,635,982	+				-2.1
4,635,982	+				-2.0
4,635,982	+				-2.5
4,635,982	+				-1.5
4,635,982	+				-1.1
4,635,982	+				-1.7
4,635,982	+				-3.1
4,635,982	+				-1.1
4,635,982	+				-2.7
4,635,982	+				-2.1
4,635,982	+				-1.5
4,635,983	-				-1.7
4,635,983	-				-0.7
4,635,983	-				-3.9
4,635,983	-				-2.6
4,635,983	-				-2.0
4,635,983	-				-2.8
4,635,983	-				-1.5
4,635,983	-				-2.3
4,635,983	-				-0.6
4,635,983	-				+0.9
4,635,983	-				-2.3
4,636,043	-				-2.1
4,636,043	-				-2.1
4,636,091	-				-0.6
4,636,091	-				-2.0
4,636,135	-				-1.7
4,636,135	-				-1.5
4,636,142	+				-1.3
4,636,142	+				-3.4
4,636,147	+				-3.5
4,636,228	+				-2.3
4,636,228	+				-1.5
4,636,228	+				+0.9
4,636,228	+				-2.4
4,636,228	+				-1.8
4,636,229	-				-0.1
4,636,229	-				-1.1
4,636,329	+		PFLU_RS20585	0.14	-1.4
4,636,329	+		PFLU_RS20585	0.14	-1.0
4,636,329	+		PFLU_RS20585	0.14	-1.6
4,636,329	+		PFLU_RS20585	0.14	-0.7
4,636,329	+		PFLU_RS20585	0.14	-1.2
4,636,329	+		PFLU_RS20585	0.14	+0.2
4,636,329	+		PFLU_RS20585	0.14	-1.5
4,636,330	-		PFLU_RS20585	0.14	-0.7
4,636,330	-		PFLU_RS20585	0.14	-2.3
4,636,330	-		PFLU_RS20585	0.14	-1.4
4,636,330	-		PFLU_RS20585	0.14	-0.8
4,636,330	-		PFLU_RS20585	0.14	-3.3
4,636,330	-		PFLU_RS20585	0.14	-0.5
4,636,330	-		PFLU_RS20585	0.14	-2.1
4,636,330	-		PFLU_RS20585	0.14	-1.1
4,636,330	-		PFLU_RS20585	0.14	-1.1
4,636,330	-		PFLU_RS20585	0.14	-1.0
4,636,406	+		PFLU_RS20585	0.23	+0.9
4,636,406	+		PFLU_RS20585	0.23	-1.6
4,636,598	+		PFLU_RS20585	0.44	+0.1
4,636,598	+		PFLU_RS20585	0.44	-1.7
4,636,801	+		PFLU_RS20585	0.67	+0.1
4,636,801	+		PFLU_RS20585	0.67	-0.1
4,636,810	+		PFLU_RS20585	0.68	-0.9
4,636,810	+		PFLU_RS20585	0.68	+0.7
4,636,810	+		PFLU_RS20585	0.68	-1.1
4,636,810	+		PFLU_RS20585	0.68	+0.1
4,636,810	+		PFLU_RS20585	0.68	-1.6
4,636,810	+		PFLU_RS20585	0.68	+1.9
4,636,810	+		PFLU_RS20585	0.68	-0.7
4,636,810	+		PFLU_RS20585	0.68	+0.3
4,636,810	+		PFLU_RS20585	0.68	-0.7
4,636,810	+		PFLU_RS20585	0.68	-0.7
4,636,810	+		PFLU_RS20585	0.68	+0.9
4,636,811	-		PFLU_RS20585	0.68	-2.0
4,636,811	-		PFLU_RS20585	0.68	-0.7
4,636,811	-		PFLU_RS20585	0.68	-3.0
4,636,811	-		PFLU_RS20585	0.68	-1.1
4,636,811	-		PFLU_RS20585	0.68	-0.1
4,636,811	-		PFLU_RS20585	0.68	-3.3
4,636,867	+		PFLU_RS20585	0.75	+0.6
4,636,867	+		PFLU_RS20585	0.75	-0.0
4,636,867	+		PFLU_RS20585	0.75	-2.1
4,636,867	+		PFLU_RS20585	0.75	-0.7
4,636,867	+		PFLU_RS20585	0.75	-1.0
4,636,867	+		PFLU_RS20585	0.75	-0.8
4,636,868	-		PFLU_RS20585	0.75	-0.9
4,636,868	-		PFLU_RS20585	0.75	-1.4
4,636,871	+		PFLU_RS20585	0.75	-0.6
4,636,872	-		PFLU_RS20585	0.75	-0.0
4,636,882	+		PFLU_RS20585	0.76	-0.7
4,636,882	+		PFLU_RS20585	0.76	+0.9
4,636,882	+		PFLU_RS20585	0.76	-0.6
4,636,883	-		PFLU_RS20585	0.76	-1.6
4,636,883	-		PFLU_RS20585	0.76	-1.7
4,636,883	-		PFLU_RS20585	0.76	-1.1
4,636,883	-		PFLU_RS20585	0.76	-2.7
4,636,883	-		PFLU_RS20585	0.76	+1.2
4,636,883	-		PFLU_RS20585	0.76	-2.4
4,636,883	-		PFLU_RS20585	0.76	-0.4
4,636,921	-		PFLU_RS20585	0.81	-0.7
4,636,950	+		PFLU_RS20585	0.84	-1.8
4,636,950	+		PFLU_RS20585	0.84	-0.7
4,636,950	+		PFLU_RS20585	0.84	-0.7
4,636,951	-		PFLU_RS20585	0.84	-0.8
4,636,951	-		PFLU_RS20585	0.84	-2.5
4,636,958	-		PFLU_RS20585	0.85	-0.1
4,636,958	-		PFLU_RS20585	0.85	-0.1
4,636,974	+		PFLU_RS20585	0.87	-0.6
4,636,974	+		PFLU_RS20585	0.87	+1.4
4,636,974	+		PFLU_RS20585	0.87	-0.7
4,636,974	+		PFLU_RS20585	0.87	+0.9
4,636,975	-		PFLU_RS20585	0.87	-2.1
4,636,975	-		PFLU_RS20585	0.87	-0.6
4,636,975	-		PFLU_RS20585	0.87	-2.8
4,636,975	-		PFLU_RS20585	0.87	-0.7
4,636,992	+		PFLU_RS20585	0.89	-1.5
4,636,992	+		PFLU_RS20585	0.89	+0.5
4,636,992	+		PFLU_RS20585	0.89	-0.7
4,636,992	+		PFLU_RS20585	0.89	-0.4
4,636,992	+		PFLU_RS20585	0.89	-0.8
4,636,992	+		PFLU_RS20585	0.89	-1.0
4,636,992	+		PFLU_RS20585	0.89	-1.8
4,636,992	+		PFLU_RS20585	0.89	-0.1
4,636,992	+		PFLU_RS20585	0.89	-1.0
4,636,993	-		PFLU_RS20585	0.89	-0.8
4,636,993	-		PFLU_RS20585	0.89	+0.9
4,636,993	-		PFLU_RS20585	0.89	-0.5
4,636,993	-		PFLU_RS20585	0.89	-3.0
4,636,993	-		PFLU_RS20585	0.89	-1.0
4,636,993	-		PFLU_RS20585	0.89	-0.6
4,636,993	-		PFLU_RS20585	0.89	-0.1
4,636,993	-		PFLU_RS20585	0.89	+0.4
4,636,993	-		PFLU_RS20585	0.89	-1.1
4,636,997	+		PFLU_RS20585	0.89	+2.9
4,636,997	+		PFLU_RS20585	0.89	+0.4
4,636,997	+		PFLU_RS20585	0.89	-1.1
4,636,997	+		PFLU_RS20585	0.89	-1.8
4,636,997	+		PFLU_RS20585	0.89	-1.5
4,636,997	+		PFLU_RS20585	0.89	-2.0
4,636,997	+		PFLU_RS20585	0.89	-1.1
4,636,997	+		PFLU_RS20585	0.89	-0.8
4,636,997	+		PFLU_RS20585	0.89	+1.0
4,636,997	+		PFLU_RS20585	0.89	+0.1
4,636,997	+		PFLU_RS20585	0.89	-1.7
4,636,997	+		PFLU_RS20585	0.89	-0.5
4,636,997	+		PFLU_RS20585	0.89	-1.5
4,636,997	+		PFLU_RS20585	0.89	-1.1
4,636,998	-		PFLU_RS20585	0.89	-0.3
4,636,998	-		PFLU_RS20585	0.89	-0.1
4,636,998	-		PFLU_RS20585	0.89	-0.9
4,636,998	-		PFLU_RS20585	0.89	-1.6
4,636,998	-		PFLU_RS20585	0.89	-1.1
4,636,998	-		PFLU_RS20585	0.89	+0.1
4,636,998	-		PFLU_RS20585	0.89	-1.8
4,636,998	-		PFLU_RS20585	0.89	-0.1
4,636,998	-		PFLU_RS20585	0.89	-0.5
4,636,998	-		PFLU_RS20585	0.89	-1.6
4,636,998	-		PFLU_RS20585	0.89	+1.4
4,636,998	-		PFLU_RS20585	0.89	-3.1
4,636,998	-		PFLU_RS20585	0.89	-2.3
4,636,998	-		PFLU_RS20585	0.89	+0.3
4,636,999	+		PFLU_RS20585	0.89	+2.4
4,636,999	+		PFLU_RS20585	0.89	+1.9
4,637,000	-		PFLU_RS20585	0.90	-2.7
4,637,000	-		PFLU_RS20585	0.90	-1.3
4,637,000	-		PFLU_RS20585	0.90	-0.3
4,637,052	+				+0.1
4,637,052	+				+0.9
4,637,053	-				-1.2
4,637,053	-				-0.4
4,637,053	-				-1.4
4,637,117	+				+1.9
4,637,127	+				-0.0
4,637,129	+				-0.7
4,637,129	+				+2.4
4,637,129	+				+0.2
4,637,129	+				+0.1
4,637,130	-				-0.1
4,637,130	-				-1.6
4,637,130	-				+0.2
4,637,130	-				-0.4
4,637,130	-				-1.2
4,637,130	-				+0.3
4,637,130	-				-0.6
4,637,130	-				+1.4
4,637,157	-				-0.9
4,637,200	+				+0.3
4,637,201	-				+1.2
4,637,201	-				+0.3
4,637,265	+				-0.4
4,637,265	+				+0.9
4,637,265	+				+0.2
4,637,266	-				+1.6
4,637,266	-				-0.1
4,637,266	-				-1.1
4,637,387	-				+0.6
4,637,426	+				+0.4
4,637,586	+		PFLU_RS20590	0.13	-0.5
4,637,586	+		PFLU_RS20590	0.13	+1.2
4,637,586	+		PFLU_RS20590	0.13	+0.9
4,637,587	-		PFLU_RS20590	0.13	-0.6
4,637,716	+		PFLU_RS20590	0.17	-1.1
4,637,717	-		PFLU_RS20590	0.17	-0.2
4,637,717	-		PFLU_RS20590	0.17	-0.5
4,637,717	-		PFLU_RS20590	0.17	+0.4
4,637,783	+		PFLU_RS20590	0.19	-0.1
4,637,784	-		PFLU_RS20590	0.19	+1.4
4,637,784	-		PFLU_RS20590	0.19	+0.4
4,637,874	+		PFLU_RS20590	0.22	+0.8
4,637,875	-		PFLU_RS20590	0.22	-0.3
4,637,935	+		PFLU_RS20590	0.24	-0.2
4,637,935	+		PFLU_RS20590	0.24	+0.1
4,637,935	+		PFLU_RS20590	0.24	+0.5
4,637,935	+		PFLU_RS20590	0.24	+0.9
4,637,936	-		PFLU_RS20590	0.24	-1.3
4,637,936	-		PFLU_RS20590	0.24	+0.1
4,637,936	-		PFLU_RS20590	0.24	-0.1
4,637,936	-		PFLU_RS20590	0.24	-0.4
4,638,077	-		PFLU_RS20590	0.28	-1.5