Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS06975

Experiment: Citraconic 20 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Citraconic 20 mM (C)
1,560,501	-		PFLU_RS06970	0.36	-0.7
1,560,501	-		PFLU_RS06970	0.36	+0.3
1,560,533	+		PFLU_RS06970	0.39	+1.2
1,560,533	+		PFLU_RS06970	0.39	-0.4
1,560,533	+		PFLU_RS06970	0.39	+0.5
1,560,533	+		PFLU_RS06970	0.39	-0.4
1,560,534	-		PFLU_RS06970	0.39	+0.3
1,560,565	+		PFLU_RS06970	0.42	-0.8
1,560,565	+		PFLU_RS06970	0.42	-0.1
1,560,565	+		PFLU_RS06970	0.42	-0.4
1,560,565	+		PFLU_RS06970	0.42	-0.4
1,560,565	+		PFLU_RS06970	0.42	+0.0
1,560,566	-		PFLU_RS06970	0.42	-0.3
1,560,566	-		PFLU_RS06970	0.42	+0.3
1,560,566	-		PFLU_RS06970	0.42	-0.8
1,560,668	+		PFLU_RS06970	0.50	-0.1
1,560,668	+		PFLU_RS06970	0.50	+0.3
1,560,669	-		PFLU_RS06970	0.50	-0.1
1,560,669	-		PFLU_RS06970	0.50	-0.1
1,560,669	-		PFLU_RS06970	0.50	+0.3
1,560,770	+		PFLU_RS06970	0.59	-0.1
1,560,770	+		PFLU_RS06970	0.59	-0.0
1,561,019	+		PFLU_RS06970	0.80	-0.9
1,561,050	+		PFLU_RS06970	0.82	+0.7
1,561,050	+		PFLU_RS06970	0.82	-0.4
1,561,050	+		PFLU_RS06970	0.82	-0.2
1,561,050	+		PFLU_RS06970	0.82	-0.7
1,561,051	-		PFLU_RS06970	0.83	+0.5
1,561,112	+		PFLU_RS06970	0.88	-0.0
1,561,112	+		PFLU_RS06970	0.88	-0.1
1,561,112	+		PFLU_RS06970	0.88	+0.2
1,561,112	+		PFLU_RS06970	0.88	-0.8
1,561,112	+		PFLU_RS06970	0.88	-1.3
1,561,113	-		PFLU_RS06970	0.88	-0.1
1,561,113	-		PFLU_RS06970	0.88	-0.4
1,561,113	-		PFLU_RS06970	0.88	-0.3
1,561,113	-		PFLU_RS06970	0.88	+0.3
1,561,113	-		PFLU_RS06970	0.88	-1.0
1,561,113	-		PFLU_RS06970	0.88	-1.2
1,561,113	-		PFLU_RS06970	0.88	-0.6
1,561,113	-		PFLU_RS06970	0.88	-0.2
1,561,113	-		PFLU_RS06970	0.88	-1.0
1,561,187	+				+1.6
1,561,187	+				+1.9
1,561,187	+				+0.3
1,561,187	+				+0.0
1,561,187	+				+0.5
1,561,188	-				+0.0
1,561,188	-				+0.8
1,561,188	-				-0.1
1,561,188	-				-0.4
1,561,188	-				-2.7
1,561,188	-				-1.0
1,561,248	+				-0.8
1,561,248	+				-0.6
1,561,248	+				-0.0
1,561,248	+				+0.4
1,561,249	-				+0.7
1,561,249	-				-0.7
1,561,284	-				-2.2
1,561,288	+				+0.6
1,561,288	+				+0.8
1,561,288	+				-1.2
1,561,288	+				+1.4
1,561,288	+				-0.0
1,561,288	+				+1.3
1,561,288	+				+0.1
1,561,288	+				-0.7
1,561,288	+				-1.0
1,561,288	+				+0.0
1,561,289	-				+0.9
1,561,289	-				-0.6
1,561,289	-				-0.7
1,561,289	-				-1.2
1,561,289	-				-0.0
1,561,289	-				-0.2
1,561,289	-				-1.1
1,561,289	-				-0.5
1,561,289	-				-1.2
1,561,298	+				-0.6
1,561,298	+				-0.5
1,561,298	+				+1.8
1,561,298	+				-0.8
1,561,298	+				-1.1
1,561,298	+				-2.0
1,561,299	-				+0.2
1,561,299	-				-1.4
1,561,299	-				+0.0
1,561,299	-				-1.0
1,561,299	-				-0.8
1,561,313	+				-0.3
1,561,313	+				-0.7
1,561,313	+				+0.9
1,561,334	+				+0.5
1,561,366	-				+0.8
1,561,366	-				-0.0
1,561,601	+		PFLU_RS06975	0.37	+1.8
1,561,601	+		PFLU_RS06975	0.37	+2.7
1,561,601	+		PFLU_RS06975	0.37	-0.5
1,561,601	+		PFLU_RS06975	0.37	+0.3
1,561,601	+		PFLU_RS06975	0.37	+1.0
1,561,601	+		PFLU_RS06975	0.37	-1.0
1,561,601	+		PFLU_RS06975	0.37	+1.9
1,561,601	+		PFLU_RS06975	0.37	+2.0
1,561,601	+		PFLU_RS06975	0.37	+1.6
1,561,602	-		PFLU_RS06975	0.37	-0.5
1,561,602	-		PFLU_RS06975	0.37	-0.6
1,561,602	-		PFLU_RS06975	0.37	+0.6
1,561,602	-		PFLU_RS06975	0.37	-0.3
1,561,602	-		PFLU_RS06975	0.37	-1.1
1,561,602	-		PFLU_RS06975	0.37	-0.6
1,561,602	-		PFLU_RS06975	0.37	+1.5
1,561,616	+		PFLU_RS06975	0.39	+1.4
1,561,616	+		PFLU_RS06975	0.39	+2.8
1,561,616	+		PFLU_RS06975	0.39	+0.9
1,561,616	+		PFLU_RS06975	0.39	+1.4
1,561,616	+		PFLU_RS06975	0.39	-0.2
1,561,616	+		PFLU_RS06975	0.39	+0.7
1,561,616	+		PFLU_RS06975	0.39	+0.5
1,561,616	+		PFLU_RS06975	0.39	+1.2
1,561,616	+		PFLU_RS06975	0.39	-0.2
1,561,616	+		PFLU_RS06975	0.39	+3.3
1,561,616	+		PFLU_RS06975	0.39	+1.5
1,561,617	-		PFLU_RS06975	0.39	-1.3
1,561,617	-		PFLU_RS06975	0.39	+0.9
1,561,617	-		PFLU_RS06975	0.39	+1.0
1,561,617	-		PFLU_RS06975	0.39	-0.1
1,561,617	-		PFLU_RS06975	0.39	-1.8
1,561,617	-		PFLU_RS06975	0.39	+0.2
1,561,617	-		PFLU_RS06975	0.39	+0.1
1,561,617	-		PFLU_RS06975	0.39	+1.0
1,561,617	-		PFLU_RS06975	0.39	-0.3
1,561,617	-		PFLU_RS06975	0.39	+0.0
1,561,617	-		PFLU_RS06975	0.39	-1.8
1,561,617	-		PFLU_RS06975	0.39	-0.5
1,561,617	-		PFLU_RS06975	0.39	-0.2
1,561,617	-		PFLU_RS06975	0.39	-0.4
1,561,617	-		PFLU_RS06975	0.39	-0.5
1,561,617	-		PFLU_RS06975	0.39	+0.0
1,561,617	-		PFLU_RS06975	0.39	-0.9
1,561,626	-		PFLU_RS06975	0.41	+3.0
1,561,675	+		PFLU_RS06975	0.48	+0.8
1,561,675	+		PFLU_RS06975	0.48	+2.4
1,561,675	+		PFLU_RS06975	0.48	-1.5
1,561,675	+		PFLU_RS06975	0.48	-0.5
1,561,675	+		PFLU_RS06975	0.48	+1.3
1,561,676	-		PFLU_RS06975	0.48	-1.0
1,561,676	-		PFLU_RS06975	0.48	-0.2
1,561,676	-		PFLU_RS06975	0.48	+1.0
1,561,676	-		PFLU_RS06975	0.48	+0.5
1,561,679	+		PFLU_RS06975	0.48	+2.9
1,561,679	+		PFLU_RS06975	0.48	+0.6
1,561,679	+		PFLU_RS06975	0.48	+0.6
1,561,679	+		PFLU_RS06975	0.48	+1.7
1,561,679	+		PFLU_RS06975	0.48	+2.0
1,561,679	+		PFLU_RS06975	0.48	+3.2
1,561,679	+		PFLU_RS06975	0.48	+2.3
1,561,680	-		PFLU_RS06975	0.49	-2.6
1,561,680	-		PFLU_RS06975	0.49	-1.5
1,561,680	-		PFLU_RS06975	0.49	+0.5
1,561,680	-		PFLU_RS06975	0.49	-0.3
1,561,680	-		PFLU_RS06975	0.49	-0.2
1,561,680	-		PFLU_RS06975	0.49	+0.6
1,561,680	-		PFLU_RS06975	0.49	+2.6
1,561,680	-		PFLU_RS06975	0.49	-0.1
1,561,680	-		PFLU_RS06975	0.49	+0.0
1,561,787	+		PFLU_RS06975	0.64	+3.4
1,561,787	+		PFLU_RS06975	0.64	+0.4
1,561,787	+		PFLU_RS06975	0.64	+2.8
1,561,787	+		PFLU_RS06975	0.64	+1.9
1,561,787	+		PFLU_RS06975	0.64	+3.7
1,561,787	+		PFLU_RS06975	0.64	+3.2
1,561,787	+		PFLU_RS06975	0.64	-0.3
1,561,787	+		PFLU_RS06975	0.64	+2.2
1,561,787	+		PFLU_RS06975	0.64	+2.7
1,561,787	+		PFLU_RS06975	0.64	+2.6
1,561,787	+		PFLU_RS06975	0.64	+3.3
1,561,788	-		PFLU_RS06975	0.65	-1.8
1,561,788	-		PFLU_RS06975	0.65	-0.9
1,561,788	-		PFLU_RS06975	0.65	-1.4
1,561,788	-		PFLU_RS06975	0.65	+0.0
1,561,788	-		PFLU_RS06975	0.65	-0.7
1,561,788	-		PFLU_RS06975	0.65	-1.4
1,561,788	-		PFLU_RS06975	0.65	+0.6
1,561,788	-		PFLU_RS06975	0.65	-1.5
1,561,788	-		PFLU_RS06975	0.65	+0.2
1,561,847	+		PFLU_RS06975	0.73	+1.1
1,561,847	+		PFLU_RS06975	0.73	+1.5
1,561,847	+		PFLU_RS06975	0.73	+1.8
1,561,848	-		PFLU_RS06975	0.73	+0.4
1,561,848	-		PFLU_RS06975	0.73	-0.3
1,561,859	+		PFLU_RS06975	0.75	+3.3
1,561,859	+		PFLU_RS06975	0.75	+2.6
1,561,859	+		PFLU_RS06975	0.75	+1.0
1,561,859	+		PFLU_RS06975	0.75	+2.3
1,561,860	-		PFLU_RS06975	0.75	+0.0
1,561,921	+		PFLU_RS06975	0.84	+2.6
1,561,921	+		PFLU_RS06975	0.84	+2.5
1,561,922	-		PFLU_RS06975	0.84	+0.7
1,561,922	-		PFLU_RS06975	0.84	+2.9
1,562,045	+				+3.8
1,562,045	+				+4.4
1,562,045	+				+0.9
1,562,045	+				+2.4
1,562,046	-				-0.5
1,562,046	-				-0.3
1,562,046	-				-0.1
1,562,046	-				+0.0
1,562,130	+		PFLU_RS06980	0.11	-2.0
1,562,130	+		PFLU_RS06980	0.11	+0.2
1,562,130	+		PFLU_RS06980	0.11	-1.1
1,562,130	+		PFLU_RS06980	0.11	+2.0
1,562,131	-		PFLU_RS06980	0.12	-2.2
1,562,131	-		PFLU_RS06980	0.12	-2.0
1,562,131	-		PFLU_RS06980	0.12	+0.0
1,562,131	-		PFLU_RS06980	0.12	+0.0
1,562,131	-		PFLU_RS06980	0.12	+0.0
1,562,131	-		PFLU_RS06980	0.12	-1.7
1,562,160	-		PFLU_RS06980	0.15	+0.6
1,562,160	-		PFLU_RS06980	0.15	-0.1
1,562,307	+		PFLU_RS06980	0.31	-2.0
1,562,307	+		PFLU_RS06980	0.31	+0.5
1,562,307	+		PFLU_RS06980	0.31	+0.5
1,562,308	-		PFLU_RS06980	0.31	-0.5
1,562,308	-		PFLU_RS06980	0.31	-0.4
1,562,308	-		PFLU_RS06980	0.31	-1.3
1,562,308	-		PFLU_RS06980	0.31	-1.3
1,562,308	-		PFLU_RS06980	0.31	-0.4
1,562,308	-		PFLU_RS06980	0.31	+0.0
1,562,308	-		PFLU_RS06980	0.31	-0.8
1,562,326	+		PFLU_RS06980	0.33	-0.2
1,562,326	+		PFLU_RS06980	0.33	+0.2
1,562,326	+		PFLU_RS06980	0.33	+0.7
1,562,326	+		PFLU_RS06980	0.33	-0.2
1,562,326	+		PFLU_RS06980	0.33	-0.6
1,562,326	+		PFLU_RS06980	0.33	-2.1
1,562,326	+		PFLU_RS06980	0.33	+0.5
1,562,326	+		PFLU_RS06980	0.33	-0.7
1,562,326	+		PFLU_RS06980	0.33	+1.0
1,562,326	+		PFLU_RS06980	0.33	-1.1
1,562,327	-		PFLU_RS06980	0.33	-0.5
1,562,327	-		PFLU_RS06980	0.33	+0.0
1,562,327	-		PFLU_RS06980	0.33	-0.7
1,562,327	-		PFLU_RS06980	0.33	+0.1
1,562,327	-		PFLU_RS06980	0.33	-2.7
1,562,327	-		PFLU_RS06980	0.33	-1.3
1,562,327	-		PFLU_RS06980	0.33	+0.6
1,562,327	-		PFLU_RS06980	0.33	-1.0
1,562,531	-		PFLU_RS06980	0.56	+0.2
1,562,531	-		PFLU_RS06980	0.56	-0.2
1,562,531	-		PFLU_RS06980	0.56	-0.3
1,562,531	-		PFLU_RS06980	0.56	-0.5
1,562,623	+		PFLU_RS06980	0.66	+0.4
1,562,623	+		PFLU_RS06980	0.66	-2.0
1,562,624	-		PFLU_RS06980	0.66	-0.1
1,562,624	-		PFLU_RS06980	0.66	-2.1
1,562,655	+		PFLU_RS06980	0.69	+0.5
1,562,656	-		PFLU_RS06980	0.69	-1.0
1,562,656	-		PFLU_RS06980	0.69	-0.3
1,562,656	-		PFLU_RS06980	0.69	-1.4
1,562,656	-		PFLU_RS06980	0.69	+0.0
1,562,656	-		PFLU_RS06980	0.69	+0.1
1,562,656	-		PFLU_RS06980	0.69	+1.0
1,562,785	+		PFLU_RS06980	0.83	+2.9
1,562,785	+		PFLU_RS06980	0.83	+1.6
1,562,785	+		PFLU_RS06980	0.83	+0.7
1,562,785	+		PFLU_RS06980	0.83	-0.8
1,562,786	-		PFLU_RS06980	0.84	-1.4
1,562,786	-		PFLU_RS06980	0.84	+0.9
1,562,786	-		PFLU_RS06980	0.84	+0.9
1,562,786	-		PFLU_RS06980	0.84	+0.0
1,562,904	-				-0.1
1,562,984	+				+2.1
1,562,984	+				+3.3
1,562,984	+				+2.3
1,562,984	+				+2.3
1,562,984	+				+3.4
1,562,985	-				-0.3
1,562,985	-				+1.0
1,562,985	-				+2.0
1,563,016	+				-1.1
1,563,016	+				-0.8
1,563,016	+				-1.7
1,563,016	+				+0.1
1,563,016	+				-1.0
1,563,016	+				-1.5
1,563,017	-				+0.9
1,563,017	-				+0.2
1,563,017	-				-0.4
1,563,017	-				-0.9
1,563,017	-				-0.2