Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS29850

Experiment: L-tyrosine 10 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-tyrosine 10 mM (C)
6,636,904	-		PFLU_RS29845	0.80	+0.9
6,636,904	-		PFLU_RS29845	0.80	-1.7
6,636,904	-		PFLU_RS29845	0.80	-1.1
6,637,062	+		PFLU_RS29845	0.83	-0.0
6,637,062	+		PFLU_RS29845	0.83	+2.6
6,637,062	+		PFLU_RS29845	0.83	-0.4
6,637,062	+		PFLU_RS29845	0.83	-0.1
6,637,062	+		PFLU_RS29845	0.83	-0.6
6,637,063	-		PFLU_RS29845	0.83	+1.1
6,637,063	-		PFLU_RS29845	0.83	-0.9
6,637,063	-		PFLU_RS29845	0.83	-0.1
6,637,086	+		PFLU_RS29845	0.84	-1.8
6,637,086	+		PFLU_RS29845	0.84	-0.6
6,637,087	-		PFLU_RS29845	0.84	+0.5
6,637,087	-		PFLU_RS29845	0.84	+0.2
6,637,087	-		PFLU_RS29845	0.84	-2.1
6,637,135	-		PFLU_RS29845	0.85	-0.8
6,637,178	-		PFLU_RS29845	0.86	+0.2
6,637,228	+		PFLU_RS29845	0.87	+0.1
6,637,229	-		PFLU_RS29845	0.87	-0.1
6,637,276	-		PFLU_RS29845	0.88	+1.2
6,637,291	+		PFLU_RS29845	0.88	-0.3
6,637,291	+		PFLU_RS29845	0.88	-1.4
6,637,292	-		PFLU_RS29845	0.88	+0.3
6,637,459	+				+0.4
6,637,459	+				+0.5
6,637,459	+				-0.4
6,637,459	+				-0.2
6,637,459	+				+0.4
6,637,459	+				-0.3
6,637,459	+				+0.2
6,637,459	+				-1.2
6,637,460	-				-1.3
6,637,460	-				+0.9
6,637,460	-				-0.7
6,637,460	-				+1.3
6,637,500	+				+0.6
6,637,500	+				+0.5
6,637,500	+				-0.1
6,637,500	+				-2.7
6,637,500	+				+0.7
6,637,500	+				-0.7
6,637,500	+				+0.2
6,637,500	+				+0.4
6,637,501	-				-0.9
6,637,501	-				-0.5
6,637,501	-				+1.1
6,637,501	-				-1.0
6,637,501	-				+0.7
6,637,501	-				-0.5
6,637,501	-				+0.0
6,637,523	-				-1.0
6,637,589	+				+3.9
6,637,589	+				+0.5
6,637,589	+				+0.8
6,637,628	+				+0.4
6,637,628	+				+0.6
6,637,628	+				-0.6
6,637,628	+				+1.1
6,637,628	+				+0.5
6,637,628	+				-0.1
6,637,628	+				+0.3
6,637,629	-				-0.4
6,637,629	-				-0.6
6,637,629	-				-2.4
6,637,629	-				-0.1
6,637,629	-				-0.3
6,637,629	-				+1.2
6,637,643	+				-0.7
6,637,643	+				+0.5
6,637,643	+				-0.1
6,637,644	-				+0.0
6,637,644	-				+0.3
6,637,724	+				+0.1
6,637,756	+				-1.7
6,637,756	+				-2.0
6,637,756	+				-0.3
6,637,756	+				-0.6
6,637,757	-				-0.1
6,637,757	-				+0.9
6,637,757	-				-0.4
6,637,757	-				+1.0
6,637,757	-				+0.9
6,637,762	+				+0.4
6,637,762	+				-0.2
6,637,762	+				+0.3
6,637,762	+				+1.7
6,637,762	+				+1.0
6,637,763	-				+0.3
6,637,763	-				+0.3
6,637,763	-				+0.0
6,637,763	-				+0.6
6,637,763	-				-0.1
6,637,763	-				-1.1
6,637,766	+				+0.4
6,637,766	+				-0.4
6,637,766	+				-0.5
6,637,766	+				-0.5
6,637,766	+				+2.4
6,637,767	-				+0.0
6,637,767	-				+1.3
6,637,767	-				-0.2
6,637,767	-				+0.4
6,637,767	-				+0.3
6,637,767	-				-0.3
6,637,767	-				+0.7
6,637,810	+				-0.0
6,637,810	+				+0.4
6,637,811	-				+2.7
6,637,811	-				-1.1
6,637,961	+				-2.4
6,637,961	+				+0.5
6,637,962	-				-0.8
6,638,049	+		PFLU_RS29850	0.14	-1.0
6,638,049	+		PFLU_RS29850	0.14	+0.3
6,638,049	+		PFLU_RS29850	0.14	-0.4
6,638,050	-		PFLU_RS29850	0.15	+0.6
6,638,050	-		PFLU_RS29850	0.15	+0.0
6,638,050	-		PFLU_RS29850	0.15	+0.4
6,638,050	-		PFLU_RS29850	0.15	+0.2
6,638,163	+		PFLU_RS29850	0.22	-0.6
6,638,164	-		PFLU_RS29850	0.22	+1.1
6,638,164	-		PFLU_RS29850	0.22	-0.4
6,638,284	+		PFLU_RS29850	0.30	-0.8
6,638,284	+		PFLU_RS29850	0.30	+0.1
6,638,284	+		PFLU_RS29850	0.30	-1.7
6,638,284	+		PFLU_RS29850	0.30	+0.1
6,638,284	+		PFLU_RS29850	0.30	+1.1
6,638,285	-		PFLU_RS29850	0.30	-0.9
6,638,285	-		PFLU_RS29850	0.30	+0.7
6,638,285	-		PFLU_RS29850	0.30	-0.0
6,638,285	-		PFLU_RS29850	0.30	-1.0
6,638,291	+		PFLU_RS29850	0.30	+1.2
6,638,291	+		PFLU_RS29850	0.30	+1.1
6,638,292	-		PFLU_RS29850	0.30	+1.2
6,638,339	+		PFLU_RS29850	0.33	-0.5
6,638,339	+		PFLU_RS29850	0.33	-1.0
6,638,339	+		PFLU_RS29850	0.33	+1.2
6,638,339	+		PFLU_RS29850	0.33	+0.1
6,638,340	-		PFLU_RS29850	0.33	-2.0
6,638,340	-		PFLU_RS29850	0.33	-2.6
6,638,340	-		PFLU_RS29850	0.33	+2.3
6,638,340	-		PFLU_RS29850	0.33	-0.5
6,638,340	-		PFLU_RS29850	0.33	-1.5
6,638,340	-		PFLU_RS29850	0.33	+0.1
6,638,396	+		PFLU_RS29850	0.37	-0.3
6,638,414	+		PFLU_RS29850	0.38	+0.0
6,638,415	-		PFLU_RS29850	0.38	+2.2
6,638,425	+		PFLU_RS29850	0.39	-0.7
6,638,425	+		PFLU_RS29850	0.39	-1.7
6,638,425	+		PFLU_RS29850	0.39	-1.0
6,638,425	+		PFLU_RS29850	0.39	+1.3
6,638,425	+		PFLU_RS29850	0.39	-1.3
6,638,425	+		PFLU_RS29850	0.39	+0.9
6,638,426	-		PFLU_RS29850	0.39	+0.4
6,638,426	-		PFLU_RS29850	0.39	+0.6
6,638,426	-		PFLU_RS29850	0.39	+1.6
6,638,426	-		PFLU_RS29850	0.39	-1.1
6,638,426	-		PFLU_RS29850	0.39	+0.1
6,638,426	-		PFLU_RS29850	0.39	+1.0
6,638,426	-		PFLU_RS29850	0.39	-0.8
6,638,525	+		PFLU_RS29850	0.45	-0.1
6,638,525	+		PFLU_RS29850	0.45	-0.1
6,638,525	+		PFLU_RS29850	0.45	-0.7
6,638,525	+		PFLU_RS29850	0.45	-2.1
6,638,525	+		PFLU_RS29850	0.45	+0.4
6,638,526	-		PFLU_RS29850	0.45	+0.6
6,638,526	-		PFLU_RS29850	0.45	-0.5
6,638,526	-		PFLU_RS29850	0.45	+0.7
6,638,526	-		PFLU_RS29850	0.45	-0.8
6,638,526	-		PFLU_RS29850	0.45	+1.4
6,638,590	+		PFLU_RS29850	0.49	-1.0
6,638,591	-		PFLU_RS29850	0.49	-0.3
6,638,681	-		PFLU_RS29850	0.55	+0.7
6,638,681	-		PFLU_RS29850	0.55	+0.5
6,638,734	+		PFLU_RS29850	0.59	+0.9
6,638,734	+		PFLU_RS29850	0.59	-1.3
6,638,734	+		PFLU_RS29850	0.59	-0.8
6,638,735	-		PFLU_RS29850	0.59	+0.1
6,638,735	-		PFLU_RS29850	0.59	+1.9
6,638,735	-		PFLU_RS29850	0.59	+0.1
6,638,735	-		PFLU_RS29850	0.59	+1.3
6,638,777	+		PFLU_RS29850	0.61	+0.1
6,638,777	+		PFLU_RS29850	0.61	-1.7
6,638,777	+		PFLU_RS29850	0.61	+1.4
6,638,777	+		PFLU_RS29850	0.61	-0.5
6,638,777	+		PFLU_RS29850	0.61	+0.6
6,638,777	+		PFLU_RS29850	0.61	-0.3
6,638,778	-		PFLU_RS29850	0.61	+0.9
6,638,778	-		PFLU_RS29850	0.61	-0.7
6,638,778	-		PFLU_RS29850	0.61	-0.2
6,638,778	-		PFLU_RS29850	0.61	-0.1
6,638,778	-		PFLU_RS29850	0.61	-1.3
6,638,778	-		PFLU_RS29850	0.61	-0.1
6,638,825	+		PFLU_RS29850	0.64	+0.5
6,638,826	-		PFLU_RS29850	0.65	-0.3
6,638,881	+		PFLU_RS29850	0.68	+0.0
6,638,882	-		PFLU_RS29850	0.68	-0.7
6,638,950	+		PFLU_RS29850	0.73	+1.9
6,638,951	-		PFLU_RS29850	0.73	+0.5
6,639,043	+		PFLU_RS29850	0.79	+1.3
6,639,044	-		PFLU_RS29850	0.79	-1.2
6,639,122	+		PFLU_RS29850	0.84	-0.3
6,639,122	+		PFLU_RS29850	0.84	+0.8
6,639,122	+		PFLU_RS29850	0.84	+0.2
6,639,122	+		PFLU_RS29850	0.84	+0.2
6,639,122	+		PFLU_RS29850	0.84	+0.2
6,639,122	+		PFLU_RS29850	0.84	+0.5
6,639,122	+		PFLU_RS29850	0.84	+0.1
6,639,122	+		PFLU_RS29850	0.84	+0.4
6,639,122	+		PFLU_RS29850	0.84	+0.7
6,639,122	+		PFLU_RS29850	0.84	+1.0
6,639,122	+		PFLU_RS29850	0.84	-0.0
6,639,122	+		PFLU_RS29850	0.84	+0.5
6,639,122	+		PFLU_RS29850	0.84	+0.1
6,639,122	+		PFLU_RS29850	0.84	+0.3
6,639,122	+		PFLU_RS29850	0.84	+0.4
6,639,123	-		PFLU_RS29850	0.84	-0.5
6,639,123	-		PFLU_RS29850	0.84	+0.5
6,639,123	-		PFLU_RS29850	0.84	-0.7
6,639,123	-		PFLU_RS29850	0.84	+1.3
6,639,123	-		PFLU_RS29850	0.84	+1.6
6,639,123	-		PFLU_RS29850	0.84	-3.2
6,639,123	-		PFLU_RS29850	0.84	+0.9
6,639,123	-		PFLU_RS29850	0.84	-0.1
6,639,123	-		PFLU_RS29850	0.84	+1.0
6,639,123	-		PFLU_RS29850	0.84	-0.5
6,639,123	-		PFLU_RS29850	0.84	+0.3
6,639,123	-		PFLU_RS29850	0.84	+1.2
6,639,123	-		PFLU_RS29850	0.84	+3.4
6,639,123	-		PFLU_RS29850	0.84	-1.4
6,639,123	-		PFLU_RS29850	0.84	-0.1
6,639,123	-		PFLU_RS29850	0.84	-1.1
6,639,123	-		PFLU_RS29850	0.84	-1.3
6,639,123	-		PFLU_RS29850	0.84	-0.3
6,639,123	-		PFLU_RS29850	0.84	-0.5
6,639,123	-		PFLU_RS29850	0.84	-1.3
6,639,123	-		PFLU_RS29850	0.84	+0.3
6,639,123	-		PFLU_RS29850	0.84	+1.0
6,639,123	-		PFLU_RS29850	0.84	-0.2
6,639,151	-		PFLU_RS29850	0.85	+0.3
6,639,151	-		PFLU_RS29850	0.85	+0.1
6,639,164	+		PFLU_RS29850	0.86	-0.7
6,639,164	+		PFLU_RS29850	0.86	+1.2
6,639,164	+		PFLU_RS29850	0.86	+0.0
6,639,164	+		PFLU_RS29850	0.86	+0.4
6,639,165	-		PFLU_RS29850	0.86	+0.6
6,639,165	-		PFLU_RS29850	0.86	+0.0
6,639,165	-		PFLU_RS29850	0.86	-0.2
6,639,165	-		PFLU_RS29850	0.86	+0.3
6,639,165	-		PFLU_RS29850	0.86	-0.0
6,639,165	-		PFLU_RS29850	0.86	-0.6
6,639,165	-		PFLU_RS29850	0.86	+0.5
6,639,176	+		PFLU_RS29850	0.87	-1.2
6,639,177	-		PFLU_RS29850	0.87	+0.4
6,639,293	+				-0.8
6,639,293	+				-0.5
6,639,293	+				-1.4
6,639,293	+				+0.6
6,639,294	-				+1.1
6,639,294	-				+0.2
6,639,294	-				+0.1
6,639,334	-				+0.7
6,639,375	+				+0.1
6,639,376	-				+0.5
6,639,376	-				-2.3
6,639,409	+				+0.2
6,639,409	+				+0.4
6,639,410	-				+1.0
6,639,410	-				-1.0
6,639,431	+				+0.5
6,639,431	+				-1.7
6,639,431	+				+0.5
6,639,431	+				+0.3
6,639,431	+				+0.3
6,639,431	+				-1.4
6,639,432	-				+0.3
6,639,432	-				+1.6
6,639,432	-				+0.6
6,639,432	-				-0.6
6,639,456	+				-0.1
6,639,456	+				+0.5
6,639,457	-				-2.0
6,639,457	-				+0.3
6,639,466	+				+0.7
6,639,466	+				-0.2
6,639,466	+				-2.5
6,639,466	+				-0.4
6,639,466	+				-0.7
6,639,466	+				-0.3
6,639,466	+				-0.3
6,639,466	+				-2.5
6,639,466	+				-1.3
6,639,466	+				-0.3
6,639,466	+				-0.4
6,639,466	+				+0.3
6,639,466	+				+0.7
6,639,466	+				+1.7
6,639,466	+				+0.5
6,639,466	+				+1.0
6,639,466	+				+0.4
6,639,466	+				-1.3
6,639,466	+				+0.4
6,639,466	+				+0.6
6,639,466	+				+0.4
6,639,466	+				-0.7
6,639,466	+				+1.9
6,639,466	+				+0.5
6,639,466	+				+0.2
6,639,466	+				-0.4
6,639,466	+				-1.3
6,639,466	+				-0.9
6,639,466	+				-0.2
6,639,466	+				-0.7
6,639,466	+				+0.9
6,639,466	+				-1.1
6,639,466	+				+0.5
6,639,466	+				-0.1
6,639,466	+				-1.0
6,639,466	+				-0.3
6,639,466	+				-0.7
6,639,466	+				-2.5
6,639,466	+				-0.4
6,639,466	+				-0.1
6,639,466	+				-0.3
6,639,466	+				+0.7
6,639,466	+				+1.1
6,639,466	+				-0.0
6,639,466	+				-0.7
6,639,466	+				+0.9
6,639,467	-				-0.9
6,639,467	-				-0.6
6,639,467	-				+1.4
6,639,467	-				-0.4
6,639,467	-				-1.6
6,639,467	-				+0.5
6,639,467	-				-0.6
6,639,467	-				-0.1
6,639,467	-				-1.0
6,639,467	-				+0.2
6,639,467	-				+0.4
6,639,467	-				-1.0
6,639,467	-				-0.2
6,639,467	-				+0.0
6,639,467	-				+0.1
6,639,467	-				+0.6
6,639,467	-				-0.0
6,639,467	-				+0.4
6,639,467	-				+1.0
6,639,467	-				-1.5
6,639,467	-				-0.9
6,639,467	-				-0.3
6,639,467	-				-0.7
6,639,467	-				+0.2
6,639,467	-				-1.2
6,639,467	-				-0.7
6,639,467	-				+2.1
6,639,467	-				+0.3
6,639,467	-				-0.1
6,639,467	-				+0.5
6,639,467	-				+0.6
6,639,467	-				-2.1
6,639,467	-				-0.7
6,639,467	-				+1.9
6,639,467	-				+1.0
6,639,467	-				+0.2
6,639,467	-				+0.0
6,639,543	-		PFLU_RS29855	0.13	+0.7
6,639,625	+		PFLU_RS29855	0.25	+1.4
6,639,625	+		PFLU_RS29855	0.25	+1.0
6,639,625	+		PFLU_RS29855	0.25	-2.5
6,639,625	+		PFLU_RS29855	0.25	+2.3
6,639,625	+		PFLU_RS29855	0.25	+0.7
6,639,626	-		PFLU_RS29855	0.26	+0.6
6,639,626	-		PFLU_RS29855	0.26	+0.4
6,639,712	+		PFLU_RS29855	0.39	+0.6
6,639,712	+		PFLU_RS29855	0.39	+0.7
6,639,712	+		PFLU_RS29855	0.39	+0.8
6,639,712	+		PFLU_RS29855	0.39	-0.3
6,639,712	+		PFLU_RS29855	0.39	-0.3
6,639,712	+		PFLU_RS29855	0.39	+1.2
6,639,712	+		PFLU_RS29855	0.39	+1.1
6,639,712	+		PFLU_RS29855	0.39	+0.2
6,639,712	+		PFLU_RS29855	0.39	+1.9
6,639,712	+		PFLU_RS29855	0.39	-0.5
6,639,712	+		PFLU_RS29855	0.39	+0.5
6,639,712	+		PFLU_RS29855	0.39	+0.7
6,639,712	+		PFLU_RS29855	0.39	+0.6
6,639,712	+		PFLU_RS29855	0.39	-0.1
6,639,713	-		PFLU_RS29855	0.39	-0.2
6,639,713	-		PFLU_RS29855	0.39	-0.5
6,639,713	-		PFLU_RS29855	0.39	-1.0
6,639,713	-		PFLU_RS29855	0.39	+0.0
6,639,713	-		PFLU_RS29855	0.39	-0.6
6,639,730	+		PFLU_RS29855	0.42	+0.6
6,639,731	-		PFLU_RS29855	0.42	-0.7
6,639,775	+		PFLU_RS29855	0.49	-1.6
6,639,775	+		PFLU_RS29855	0.49	-1.3
6,639,793	+		PFLU_RS29855	0.52	-1.0
6,639,793	+		PFLU_RS29855	0.52	+0.6
6,639,793	+		PFLU_RS29855	0.52	-0.0
6,639,793	+		PFLU_RS29855	0.52	-0.4
6,639,913	+		PFLU_RS29855	0.70	-2.5
6,639,913	+		PFLU_RS29855	0.70	+0.7
6,639,914	-		PFLU_RS29855	0.71	+1.3
6,639,914	-		PFLU_RS29855	0.71	+0.2
6,639,914	-		PFLU_RS29855	0.71	+0.4
6,639,914	-		PFLU_RS29855	0.71	-0.6
6,639,914	-		PFLU_RS29855	0.71	+0.4
6,639,914	-		PFLU_RS29855	0.71	+1.1
6,640,077	+				-0.5
6,640,077	+				-0.8
6,640,078	-				+0.1
6,640,078	-				-0.1
6,640,078	-				+1.2
6,640,167	+		PFLU_RS29860	0.15	+0.4
6,640,167	+		PFLU_RS29860	0.15	+0.9
6,640,167	+		PFLU_RS29860	0.15	-1.3
6,640,167	+		PFLU_RS29860	0.15	-0.3
6,640,167	+		PFLU_RS29860	0.15	+0.2
6,640,167	+		PFLU_RS29860	0.15	-0.8
6,640,167	+		PFLU_RS29860	0.15	-0.1
6,640,167	+		PFLU_RS29860	0.15	-0.2
6,640,167	+		PFLU_RS29860	0.15	+0.5
6,640,168	-		PFLU_RS29860	0.16	+0.6
6,640,168	-		PFLU_RS29860	0.16	+0.5
6,640,168	-		PFLU_RS29860	0.16	-0.1
6,640,168	-		PFLU_RS29860	0.16	-1.3
6,640,168	-		PFLU_RS29860	0.16	+0.3
6,640,168	-		PFLU_RS29860	0.16	+0.6
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6,640,179	+		PFLU_RS29860	0.18	-0.8
6,640,179	+		PFLU_RS29860	0.18	-0.6
6,640,179	+		PFLU_RS29860	0.18	-1.6
6,640,179	+		PFLU_RS29860	0.18	+0.0
6,640,179	+		PFLU_RS29860	0.18	+0.6
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6,640,180	-		PFLU_RS29860	0.18	+0.7
6,640,180	-		PFLU_RS29860	0.18	-0.1
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6,640,180	-		PFLU_RS29860	0.18	+1.7
6,640,180	-		PFLU_RS29860	0.18	+0.9
6,640,305	+		PFLU_RS29860	0.46	+0.5
6,640,305	+		PFLU_RS29860	0.46	-1.3
6,640,305	+		PFLU_RS29860	0.46	-0.4
6,640,305	+		PFLU_RS29860	0.46	+0.7
6,640,306	-		PFLU_RS29860	0.47	-0.1
6,640,306	-		PFLU_RS29860	0.47	+0.3
6,640,306	-		PFLU_RS29860	0.47	-1.0
6,640,306	-		PFLU_RS29860	0.47	+0.9
6,640,306	-		PFLU_RS29860	0.47	-0.9
6,640,306	-		PFLU_RS29860	0.47	-0.6
6,640,306	-		PFLU_RS29860	0.47	-1.3
6,640,306	-		PFLU_RS29860	0.47	-0.4
6,640,306	-		PFLU_RS29860	0.47	+0.6
6,640,306	-		PFLU_RS29860	0.47	+0.3
6,640,306	-		PFLU_RS29860	0.47	-0.7
6,640,341	+		PFLU_RS29860	0.54	+0.3
6,640,341	+		PFLU_RS29860	0.54	-0.6
6,640,341	+		PFLU_RS29860	0.54	-0.4
6,640,342	-		PFLU_RS29860	0.55	-0.1
6,640,342	-		PFLU_RS29860	0.55	-0.6
6,640,342	-		PFLU_RS29860	0.55	+0.1