Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS21865

Experiment: L-tyrosine 10 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-tyrosine 10 mM (C)
4,922,351	+		PFLU_RS21860	0.30	-2.2
4,922,351	+		PFLU_RS21860	0.30	-1.6
4,922,351	+		PFLU_RS21860	0.30	-0.9
4,922,351	+		PFLU_RS21860	0.30	-1.2
4,922,352	-		PFLU_RS21860	0.30	-0.7
4,922,352	-		PFLU_RS21860	0.30	-0.4
4,922,352	-		PFLU_RS21860	0.30	-0.7
4,922,352	-		PFLU_RS21860	0.30	-0.5
4,922,352	-		PFLU_RS21860	0.30	-0.5
4,922,352	-		PFLU_RS21860	0.30	-1.7
4,922,352	-		PFLU_RS21860	0.30	-0.8
4,922,575	+		PFLU_RS21860	0.60	-0.6
4,922,575	+		PFLU_RS21860	0.60	-2.0
4,922,575	+		PFLU_RS21860	0.60	-1.3
4,922,575	+		PFLU_RS21860	0.60	-1.9
4,922,575	+		PFLU_RS21860	0.60	-1.4
4,922,576	-		PFLU_RS21860	0.60	+0.0
4,922,576	-		PFLU_RS21860	0.60	-0.7
4,922,576	-		PFLU_RS21860	0.60	+0.1
4,922,576	-		PFLU_RS21860	0.60	+0.3
4,922,576	-		PFLU_RS21860	0.60	-3.3
4,922,576	-		PFLU_RS21860	0.60	-0.7
4,922,854	+				-0.9
4,922,854	+				-2.8
4,922,854	+				-0.7
4,922,854	+				-2.6
4,922,854	+				+0.4
4,922,854	+				-1.6
4,922,854	+				+0.5
4,922,854	+				-1.8
4,922,854	+				+0.4
4,922,854	+				-0.4
4,922,854	+				-2.6
4,922,854	+				-0.8
4,922,854	+				-0.9
4,922,854	+				-2.2
4,922,854	+				-1.4
4,922,854	+				-3.2
4,922,854	+				-0.2
4,922,854	+				-0.2
4,922,854	+				-0.5
4,922,855	-				+0.3
4,922,855	-				-0.2
4,922,855	-				-0.9
4,922,855	-				+0.1
4,922,855	-				+1.5
4,922,855	-				-1.7
4,922,855	-				+0.7
4,922,855	-				-0.2
4,922,855	-				-2.7
4,922,855	-				-1.2
4,922,855	-				-1.3
4,922,855	-				-2.8
4,922,860	+				+0.6
4,922,860	+				-2.2
4,922,860	+				+0.5
4,922,860	+				-1.9
4,922,860	+				-2.3
4,922,860	+				+0.0
4,922,860	+				+0.4
4,922,860	+				-0.0
4,922,860	+				-1.1
4,922,860	+				-0.8
4,922,860	+				-0.4
4,922,860	+				-0.1
4,922,860	+				-0.9
4,922,860	+				-1.8
4,922,860	+				-0.8
4,922,860	+				-0.8
4,922,860	+				-0.7
4,922,860	+				-1.0
4,922,860	+				-2.0
4,922,860	+				-2.5
4,922,860	+				-1.2
4,922,860	+				-1.0
4,922,860	+				-1.2
4,922,860	+				-0.7
4,922,860	+				-3.1
4,922,860	+				-0.5
4,922,860	+				-1.7
4,922,860	+				-1.6
4,922,861	-				-0.8
4,922,861	-				-0.7
4,922,861	-				-1.0
4,922,861	-				-0.5
4,922,861	-				+0.5
4,922,861	-				-0.4
4,922,861	-				-0.5
4,922,861	-				-0.8
4,922,861	-				-0.8
4,922,861	-				-0.9
4,922,861	-				-0.0
4,922,861	-				+0.2
4,922,861	-				+0.0
4,922,861	-				-1.3
4,922,861	-				-0.7
4,922,861	-				-0.9
4,922,861	-				-2.6
4,922,861	-				-2.8
4,922,861	-				-0.7
4,922,861	-				-0.2
4,922,861	-				-1.3
4,922,861	-				-1.7
4,922,861	-				+0.0
4,922,861	-				-1.0
4,922,861	-				-1.7
4,922,861	-				-1.4
4,922,861	-				-1.7
4,922,861	-				-1.7
4,922,861	-				-0.5
4,922,861	-				-2.3
4,922,861	-				-2.5
4,922,912	+				+0.2
4,922,913	-				+0.1
4,922,925	+				+2.1
4,922,925	+				-0.7
4,922,926	-				-0.5
4,922,993	+				-3.4
4,922,993	+				-0.7
4,922,994	-				-0.2
4,922,994	-				+0.4
4,922,994	-				+1.5
4,922,994	-				-0.7
4,923,037	+				-0.3
4,923,037	+				-0.5
4,923,037	+				+0.5
4,923,038	-				-0.3
4,923,038	-				-0.6
4,923,038	-				-1.1
4,923,038	-				+0.6
4,923,038	-				+0.1
4,923,038	-				-0.5
4,923,098	+				+0.1
4,923,098	+				+1.0
4,923,098	+				+0.2
4,923,098	+				-0.2
4,923,098	+				+0.1
4,923,099	-				+0.0
4,923,099	-				+1.2
4,923,099	-				+0.2
4,923,099	-				-2.1
4,923,099	-				-0.1
4,923,099	-				+0.3
4,923,099	-				+0.7
4,923,219	+				+4.0
4,923,219	+				+1.3
4,923,219	+				-0.8
4,923,219	+				-1.0
4,923,220	-				-1.1
4,923,220	-				+0.8
4,923,220	-				-0.2
4,923,220	-				+0.3
4,923,220	-				-1.7
4,923,223	+				-0.5
4,923,223	+				-1.0
4,923,223	+				-0.8
4,923,223	+				-1.5
4,923,223	+				-0.4
4,923,224	-				+0.5
4,923,226	+				-0.3
4,923,227	-				-0.9
4,923,227	-				+0.4
4,923,324	+				-2.4
4,923,324	+				-0.1
4,923,324	+				-0.8
4,923,324	+				+0.9
4,923,324	+				-1.8
4,923,324	+				-4.2
4,923,324	+				-2.4
4,923,324	+				-1.7
4,923,324	+				+0.9
4,923,324	+				-0.8
4,923,324	+				+1.5
4,923,324	+				-2.0
4,923,324	+				-3.3
4,923,325	-				-3.6
4,923,325	-				-2.0
4,923,325	-				-1.1
4,923,325	-				-1.5
4,923,325	-				-2.9
4,923,325	-				-0.8
4,923,325	-				-3.3
4,923,325	-				-2.2
4,923,325	-				-2.4
4,923,325	-				-1.8
4,923,325	-				-3.3
4,923,325	-				-1.5
4,923,325	-				-2.3
4,923,325	-				-0.7
4,923,325	-				-2.0
4,923,325	-				-2.4
4,923,325	-				-1.8
4,923,326	+				-2.1
4,923,326	+				-3.3
4,923,326	+				-2.8
4,923,326	+				-2.8
4,923,326	+				-3.4
4,923,326	+				-3.2
4,923,326	+				-3.4
4,923,326	+				-1.5
4,923,326	+				-0.8
4,923,326	+				-2.0
4,923,326	+				-0.5
4,923,326	+				-2.8
4,923,326	+				-0.8
4,923,326	+				-2.3
4,923,326	+				-2.7
4,923,326	+				-0.2
4,923,326	+				-0.4
4,923,326	+				-2.1
4,923,326	+				-2.3
4,923,326	+				-2.5
4,923,326	+				-2.0
4,923,326	+				-1.6
4,923,326	+				-1.8
4,923,326	+				-1.3
4,923,326	+				-0.1
4,923,326	+				-2.8
4,923,326	+				-2.5
4,923,326	+				-1.3
4,923,326	+				-3.7
4,923,326	+				-1.4
4,923,326	+				-2.4
4,923,327	-				-1.5
4,923,327	-				-1.5
4,923,327	-				-2.0
4,923,327	-				-0.8
4,923,327	-				-0.5
4,923,327	-				-3.6
4,923,327	-				-2.3
4,923,327	-				-2.9
4,923,327	-				-2.7
4,923,327	-				-3.6
4,923,327	-				-2.7
4,923,327	-				-3.2
4,923,327	-				-1.2
4,923,327	-				-1.1
4,923,327	-				-3.7
4,923,327	-				-1.8
4,923,327	-				-2.5
4,923,327	-				-2.2
4,923,327	-				-2.3
4,923,327	-				-2.4
4,923,327	-				-3.3
4,923,327	-				-0.8
4,923,327	-				-2.8
4,923,327	-				-1.7
4,923,327	-				-1.1
4,923,327	-				-2.1
4,923,327	-				-2.2
4,923,327	-				-2.9
4,923,327	-				-2.2
4,923,327	-				-1.8
4,923,417	+		PFLU_RS21865	0.13	-2.2
4,923,433	+		PFLU_RS21865	0.14	-2.1
4,923,433	+		PFLU_RS21865	0.14	-1.5
4,923,433	+		PFLU_RS21865	0.14	-1.4
4,923,434	-		PFLU_RS21865	0.14	-2.7
4,923,434	-		PFLU_RS21865	0.14	-0.2
4,923,434	-		PFLU_RS21865	0.14	-2.5
4,923,434	-		PFLU_RS21865	0.14	-2.3
4,923,522	+		PFLU_RS21865	0.19	-2.8
4,923,522	+		PFLU_RS21865	0.19	-1.8
4,923,522	+		PFLU_RS21865	0.19	-1.8
4,923,522	+		PFLU_RS21865	0.19	-2.7
4,923,523	-		PFLU_RS21865	0.20	-0.3
4,923,523	-		PFLU_RS21865	0.20	-3.4
4,923,523	-		PFLU_RS21865	0.20	-2.2
4,923,523	-		PFLU_RS21865	0.20	-1.5
4,923,523	-		PFLU_RS21865	0.20	-1.1
4,923,523	-		PFLU_RS21865	0.20	-3.1
4,923,523	-		PFLU_RS21865	0.20	-1.8
4,923,523	-		PFLU_RS21865	0.20	-1.5
4,923,652	+		PFLU_RS21865	0.28	-1.2
4,923,652	+		PFLU_RS21865	0.28	+1.5
4,923,652	+		PFLU_RS21865	0.28	-2.4
4,923,653	-		PFLU_RS21865	0.28	-2.0
4,923,653	-		PFLU_RS21865	0.28	-0.8
4,923,653	-		PFLU_RS21865	0.28	-3.2
4,923,653	-		PFLU_RS21865	0.28	-1.8
4,923,681	+		PFLU_RS21865	0.30	-0.6
4,923,681	+		PFLU_RS21865	0.30	-1.5
4,923,682	-		PFLU_RS21865	0.30	-2.6
4,923,682	-		PFLU_RS21865	0.30	-1.1
4,923,762	+		PFLU_RS21865	0.35	-3.3
4,923,762	+		PFLU_RS21865	0.35	-1.5
4,923,762	+		PFLU_RS21865	0.35	-0.7
4,923,763	-		PFLU_RS21865	0.35	-1.3
4,923,763	-		PFLU_RS21865	0.35	-1.5
4,923,782	+		PFLU_RS21865	0.36	-2.0
4,923,783	-		PFLU_RS21865	0.36	-2.8
4,923,871	+		PFLU_RS21865	0.42	-3.0
4,923,872	-		PFLU_RS21865	0.42	-1.4
4,923,872	-		PFLU_RS21865	0.42	+1.5
4,924,079	+		PFLU_RS21865	0.55	-4.0
4,924,079	+		PFLU_RS21865	0.55	-2.7
4,924,079	+		PFLU_RS21865	0.55	+0.5
4,924,079	+		PFLU_RS21865	0.55	-1.8
4,924,079	+		PFLU_RS21865	0.55	-0.1
4,924,079	+		PFLU_RS21865	0.55	-0.1
4,924,079	+		PFLU_RS21865	0.55	-0.8
4,924,079	+		PFLU_RS21865	0.55	-2.9
4,924,079	+		PFLU_RS21865	0.55	-2.5
4,924,079	+		PFLU_RS21865	0.55	-0.5
4,924,079	+		PFLU_RS21865	0.55	-1.1
4,924,079	+		PFLU_RS21865	0.55	-3.0
4,924,079	+		PFLU_RS21865	0.55	-2.0
4,924,079	+		PFLU_RS21865	0.55	-2.2
4,924,079	+		PFLU_RS21865	0.55	-2.7
4,924,079	+		PFLU_RS21865	0.55	-0.8
4,924,079	+		PFLU_RS21865	0.55	-3.0
4,924,079	+		PFLU_RS21865	0.55	-3.1
4,924,080	-		PFLU_RS21865	0.55	-2.5
4,924,080	-		PFLU_RS21865	0.55	-2.6
4,924,080	-		PFLU_RS21865	0.55	-1.7
4,924,080	-		PFLU_RS21865	0.55	-1.7
4,924,080	-		PFLU_RS21865	0.55	-0.8
4,924,080	-		PFLU_RS21865	0.55	-0.9
4,924,080	-		PFLU_RS21865	0.55	-2.1
4,924,080	-		PFLU_RS21865	0.55	-2.5
4,924,080	-		PFLU_RS21865	0.55	-1.8
4,924,080	-		PFLU_RS21865	0.55	-2.8
4,924,080	-		PFLU_RS21865	0.55	-2.5
4,924,082	+		PFLU_RS21865	0.55	-0.5
4,924,082	+		PFLU_RS21865	0.55	-0.8
4,924,082	+		PFLU_RS21865	0.55	-3.0
4,924,082	+		PFLU_RS21865	0.55	-1.8
4,924,082	+		PFLU_RS21865	0.55	-1.2
4,924,082	+		PFLU_RS21865	0.55	-1.4
4,924,082	+		PFLU_RS21865	0.55	-3.0
4,924,082	+		PFLU_RS21865	0.55	-3.6
4,924,083	-		PFLU_RS21865	0.55	-2.4
4,924,083	-		PFLU_RS21865	0.55	-2.9
4,924,083	-		PFLU_RS21865	0.55	-0.1
4,924,083	-		PFLU_RS21865	0.55	-1.3
4,924,083	-		PFLU_RS21865	0.55	-1.3
4,924,083	-		PFLU_RS21865	0.55	-1.3
4,924,083	-		PFLU_RS21865	0.55	-2.6
4,924,085	+		PFLU_RS21865	0.55	-0.5
4,924,085	+		PFLU_RS21865	0.55	-2.4
4,924,085	+		PFLU_RS21865	0.55	-2.4
4,924,085	+		PFLU_RS21865	0.55	-2.8
4,924,085	+		PFLU_RS21865	0.55	-1.5
4,924,085	+		PFLU_RS21865	0.55	-3.5
4,924,085	+		PFLU_RS21865	0.55	-2.8
4,924,086	-		PFLU_RS21865	0.56	-1.3
4,924,086	-		PFLU_RS21865	0.56	-3.2
4,924,086	-		PFLU_RS21865	0.56	-2.3
4,924,128	-		PFLU_RS21865	0.58	-2.0
4,924,197	+		PFLU_RS21865	0.63	-0.5
4,924,197	+		PFLU_RS21865	0.63	-3.3
4,924,197	+		PFLU_RS21865	0.63	-2.5
4,924,197	+		PFLU_RS21865	0.63	-3.0
4,924,197	+		PFLU_RS21865	0.63	-1.5
4,924,197	+		PFLU_RS21865	0.63	-2.1
4,924,197	+		PFLU_RS21865	0.63	-1.8
4,924,197	+		PFLU_RS21865	0.63	-1.3
4,924,197	+		PFLU_RS21865	0.63	-0.8
4,924,198	-		PFLU_RS21865	0.63	-0.8
4,924,198	-		PFLU_RS21865	0.63	-1.7
4,924,198	-		PFLU_RS21865	0.63	-3.3
4,924,198	-		PFLU_RS21865	0.63	-3.3
4,924,198	-		PFLU_RS21865	0.63	-1.8
4,924,198	-		PFLU_RS21865	0.63	-1.0
4,924,198	-		PFLU_RS21865	0.63	-1.0
4,924,198	-		PFLU_RS21865	0.63	-3.4
4,924,198	-		PFLU_RS21865	0.63	-2.2
4,924,198	-		PFLU_RS21865	0.63	-2.8
4,924,393	-		PFLU_RS21865	0.75	-1.7
4,924,537	+		PFLU_RS21865	0.84	-1.1
4,924,538	-		PFLU_RS21865	0.84	-3.4
4,924,565	+		PFLU_RS21865	0.86	-0.1
4,924,650	+				-2.8
4,924,651	-				-2.8
4,924,651	-				-0.8
4,924,651	-				-0.7
4,924,651	-				-3.6
4,924,651	-				-2.9
4,924,656	+				-2.4
4,924,656	+				-2.8
4,924,656	+				-2.4
4,924,656	+				-1.7
4,924,656	+				-2.7
4,924,656	+				-2.5
4,924,656	+				+0.2
4,924,657	-				-2.2
4,924,657	-				-2.3
4,924,657	-				-2.4
4,924,657	-				-2.8
4,924,657	-				-2.8
4,924,774	+				-0.5
4,924,775	-				-2.0
4,924,797	+				+0.7
4,924,797	+				-0.2
4,924,798	-				+0.5
4,924,798	-				-0.1
4,924,798	-				+0.1
4,924,798	-				+2.7
4,924,847	+				+0.7
4,924,847	+				-1.4
4,924,847	+				-1.9
4,924,848	-				-0.5
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4,924,848	-				+0.7
4,924,848	-				-1.5
4,924,938	-				-3.2
4,924,983	-				-3.3
4,924,988	+				-2.7
4,924,988	+				-1.2
4,924,989	-				-2.9
4,924,989	-				-0.5
4,924,989	-				-1.1
4,924,989	-				-1.1
4,924,989	-				-3.3
4,924,989	-				-2.7
4,925,006	+				-0.3
4,925,006	+				-0.6
4,925,006	+				+0.6
4,925,006	+				-0.4
4,925,006	+				-0.3
4,925,006	+				-1.5
4,925,006	+				-1.8
4,925,006	+				+1.1
4,925,006	+				+0.6
4,925,006	+				-0.2
4,925,006	+				+0.9
4,925,006	+				+0.0
4,925,006	+				+0.8
4,925,006	+				+0.7
4,925,006	+				+0.5
4,925,006	+				+0.9
4,925,006	+				-0.8
4,925,006	+				-0.5
4,925,006	+				-1.2
4,925,006	+				+1.3
4,925,006	+				-0.6
4,925,007	-				-0.5
4,925,007	-				-0.8
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4,925,007	-				-0.9
4,925,007	-				-2.7
4,925,007	-				-3.0
4,925,007	-				-0.1
4,925,007	-				-1.5
4,925,007	-				-1.3
4,925,007	-				-3.0
4,925,007	-				-2.7
4,925,007	-				-1.5
4,925,007	-				-0.8
4,925,024	-				-1.6
4,925,037	+				-1.1
4,925,053	+				-1.1
4,925,053	+				-1.3
4,925,053	+				-1.5
4,925,053	+				-3.6
4,925,053	+				-2.2
4,925,053	+				-3.1
4,925,053	+				-2.1
4,925,053	+				-2.8
4,925,053	+				-1.8
4,925,053	+				-3.3
4,925,053	+				-3.2
4,925,053	+				-2.8
4,925,053	+				-1.0
4,925,054	-				-2.4
4,925,054	-				-2.8
4,925,054	-				-1.3
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4,925,086	-				-2.4
4,925,092	+				-0.6
4,925,093	-				-1.7
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4,925,173	+		PFLU_RS21870	0.17	-1.1
4,925,173	+		PFLU_RS21870	0.17	-0.8
4,925,173	+		PFLU_RS21870	0.17	-2.3
4,925,174	-		PFLU_RS21870	0.17	-2.8
4,925,174	-		PFLU_RS21870	0.17	-3.2
4,925,279	+		PFLU_RS21870	0.30	-2.3
4,925,374	+		PFLU_RS21870	0.42	+0.5
4,925,374	+		PFLU_RS21870	0.42	-2.8
4,925,375	-		PFLU_RS21870	0.43	+0.2
4,925,392	-		PFLU_RS21870	0.45	-3.5
4,925,392	-		PFLU_RS21870	0.45	+1.5
4,925,461	+		PFLU_RS21870	0.53	-0.2
4,925,462	-		PFLU_RS21870	0.54	-3.8
4,925,462	-		PFLU_RS21870	0.54	-0.8
4,925,487	+		PFLU_RS21870	0.57	+0.8
4,925,503	+		PFLU_RS21870	0.59	+0.7
4,925,504	-		PFLU_RS21870	0.59	-1.4
4,925,504	-		PFLU_RS21870	0.59	-1.7
4,925,518	+		PFLU_RS21870	0.61	-0.7
4,925,518	+		PFLU_RS21870	0.61	-1.9
4,925,519	-		PFLU_RS21870	0.61	-0.1
4,925,519	-		PFLU_RS21870	0.61	-2.3
4,925,568	+		PFLU_RS21870	0.67	-0.1
4,925,568	+		PFLU_RS21870	0.67	+1.5
4,925,568	+		PFLU_RS21870	0.67	-1.1
4,925,568	+		PFLU_RS21870	0.67	-0.7
4,925,568	+		PFLU_RS21870	0.67	-0.2
4,925,568	+		PFLU_RS21870	0.67	+0.5
4,925,569	-		PFLU_RS21870	0.67	-1.4
4,925,569	-		PFLU_RS21870	0.67	-2.8
4,925,569	-		PFLU_RS21870	0.67	-1.8
4,925,572	+		PFLU_RS21870	0.67	-0.5
4,925,572	+		PFLU_RS21870	0.67	-0.4
4,925,572	+		PFLU_RS21870	0.67	-0.4
4,925,572	+		PFLU_RS21870	0.67	+1.9
4,925,573	-		PFLU_RS21870	0.68	-2.4
4,925,573	-		PFLU_RS21870	0.68	-2.4
4,925,573	-		PFLU_RS21870	0.68	-2.5
4,925,573	-		PFLU_RS21870	0.68	-1.1
4,925,573	-		PFLU_RS21870	0.68	-2.7
4,925,573	-		PFLU_RS21870	0.68	-1.3
4,925,573	-		PFLU_RS21870	0.68	-3.7
4,925,573	-		PFLU_RS21870	0.68	-1.7
4,925,611	+		PFLU_RS21870	0.72	+0.8
4,925,611	+		PFLU_RS21870	0.72	+1.1
4,925,611	+		PFLU_RS21870	0.72	+0.5
4,925,612	-		PFLU_RS21870	0.72	-2.1
4,925,612	-		PFLU_RS21870	0.72	-3.1
4,925,612	-		PFLU_RS21870	0.72	-1.1
4,925,612	-		PFLU_RS21870	0.72	-2.4
4,925,612	-		PFLU_RS21870	0.72	-2.2
4,925,612	-		PFLU_RS21870	0.72	-3.2
4,925,612	-		PFLU_RS21870	0.72	-0.5
4,925,612	-		PFLU_RS21870	0.72	-3.2
4,925,701	+		PFLU_RS21870	0.84	-0.3
4,925,701	+		PFLU_RS21870	0.84	+0.8
4,925,702	-		PFLU_RS21870	0.84	-3.7
4,925,702	-		PFLU_RS21870	0.84	-3.4
4,925,702	-		PFLU_RS21870	0.84	+0.5
4,925,702	-		PFLU_RS21870	0.84	-2.2