Strain Fitness in Pseudomonas fluorescens SBW25-INTG around PFLU_RS11625

Experiment: Arabitol 10 mM (C)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Arabitol 10 mM (C)
2,577,148	+				+1.6
2,577,148	+				-0.2
2,577,148	+				+1.7
2,577,155	-				+0.7
2,577,193	+				+1.3
2,577,194	-				+0.7
2,577,200	+				+0.7
2,577,201	-				+0.7
2,577,201	-				-0.5
2,577,210	+				+0.2
2,577,211	-				+0.7
2,577,211	-				-1.1
2,577,269	+				-1.5
2,577,269	+				-0.5
2,577,270	-				+0.1
2,577,281	+				+0.3
2,577,281	+				-1.1
2,577,281	+				+0.5
2,577,282	-				+1.4
2,577,282	-				-2.6
2,577,282	-				+1.0
2,577,366	-				-1.3
2,577,548	+		PFLU_RS11620	0.29	+3.1
2,577,548	+		PFLU_RS11620	0.29	+0.8
2,577,548	+		PFLU_RS11620	0.29	+1.5
2,577,548	+		PFLU_RS11620	0.29	+1.2
2,577,548	+		PFLU_RS11620	0.29	+2.6
2,577,548	+		PFLU_RS11620	0.29	+2.0
2,577,548	+		PFLU_RS11620	0.29	-1.3
2,577,548	+		PFLU_RS11620	0.29	+1.0
2,577,548	+		PFLU_RS11620	0.29	+2.2
2,577,548	+		PFLU_RS11620	0.29	+1.3
2,577,549	-		PFLU_RS11620	0.29	+0.6
2,577,549	-		PFLU_RS11620	0.29	+1.5
2,577,549	-		PFLU_RS11620	0.29	+1.7
2,577,549	-		PFLU_RS11620	0.29	+2.1
2,577,549	-		PFLU_RS11620	0.29	+0.4
2,577,549	-		PFLU_RS11620	0.29	+1.9
2,577,549	-		PFLU_RS11620	0.29	+0.7
2,577,549	-		PFLU_RS11620	0.29	+0.9
2,577,549	-		PFLU_RS11620	0.29	-0.3
2,577,549	-		PFLU_RS11620	0.29	+2.2
2,577,549	-		PFLU_RS11620	0.29	+1.6
2,577,549	-		PFLU_RS11620	0.29	+1.4
2,577,549	-		PFLU_RS11620	0.29	+1.4
2,577,549	-		PFLU_RS11620	0.29	+1.8
2,577,550	+		PFLU_RS11620	0.30	+1.8
2,577,550	+		PFLU_RS11620	0.30	+2.5
2,577,550	+		PFLU_RS11620	0.30	+0.4
2,577,550	+		PFLU_RS11620	0.30	+1.0
2,577,550	+		PFLU_RS11620	0.30	+2.6
2,577,550	+		PFLU_RS11620	0.30	+2.1
2,577,550	+		PFLU_RS11620	0.30	+0.3
2,577,550	+		PFLU_RS11620	0.30	-0.3
2,577,550	+		PFLU_RS11620	0.30	+0.5
2,577,550	+		PFLU_RS11620	0.30	+1.7
2,577,550	+		PFLU_RS11620	0.30	+3.0
2,577,550	+		PFLU_RS11620	0.30	+0.9
2,577,550	+		PFLU_RS11620	0.30	+1.6
2,577,550	+		PFLU_RS11620	0.30	+1.7
2,577,550	+		PFLU_RS11620	0.30	+1.4
2,577,550	+		PFLU_RS11620	0.30	+0.6
2,577,550	+		PFLU_RS11620	0.30	+0.3
2,577,550	+		PFLU_RS11620	0.30	+0.9
2,577,550	+		PFLU_RS11620	0.30	+2.4
2,577,550	+		PFLU_RS11620	0.30	+0.9
2,577,551	-		PFLU_RS11620	0.30	+1.5
2,577,551	-		PFLU_RS11620	0.30	+1.3
2,577,551	-		PFLU_RS11620	0.30	+2.3
2,577,551	-		PFLU_RS11620	0.30	+1.1
2,577,551	-		PFLU_RS11620	0.30	+1.6
2,577,551	-		PFLU_RS11620	0.30	+1.0
2,577,551	-		PFLU_RS11620	0.30	+1.6
2,577,551	-		PFLU_RS11620	0.30	+1.1
2,577,551	-		PFLU_RS11620	0.30	+2.6
2,577,551	-		PFLU_RS11620	0.30	+3.0
2,577,551	-		PFLU_RS11620	0.30	+1.0
2,577,551	-		PFLU_RS11620	0.30	+1.0
2,577,551	-		PFLU_RS11620	0.30	+1.5
2,577,551	-		PFLU_RS11620	0.30	+1.3
2,577,551	-		PFLU_RS11620	0.30	+1.2
2,577,551	-		PFLU_RS11620	0.30	+0.5
2,577,551	-		PFLU_RS11620	0.30	+1.2
2,577,551	-		PFLU_RS11620	0.30	+0.1
2,577,551	-		PFLU_RS11620	0.30	+1.9
2,577,692	+		PFLU_RS11620	0.49	+2.0
2,577,749	+		PFLU_RS11620	0.57	+1.6
2,577,750	-		PFLU_RS11620	0.57	-0.5
2,577,862	+		PFLU_RS11620	0.73	+0.5
2,577,862	+		PFLU_RS11620	0.73	-0.9
2,577,863	-		PFLU_RS11620	0.73	+1.1
2,577,863	-		PFLU_RS11620	0.73	+0.8
2,577,925	+		PFLU_RS11620	0.81	+0.2
2,577,925	+		PFLU_RS11620	0.81	+2.4
2,577,925	+		PFLU_RS11620	0.81	+2.0
2,577,926	-		PFLU_RS11620	0.82	+1.4
2,577,926	-		PFLU_RS11620	0.82	+1.0
2,577,926	-		PFLU_RS11620	0.82	+2.6
2,577,926	-		PFLU_RS11620	0.82	+2.5
2,577,926	-		PFLU_RS11620	0.82	+2.4
2,578,081	-				+1.1
2,578,096	+				+0.7
2,578,096	+				+0.7
2,578,096	+				+0.5
2,578,096	+				-0.3
2,578,096	+				-0.9
2,578,096	+				+0.4
2,578,096	+				-1.3
2,578,096	+				-2.5
2,578,096	+				-0.7
2,578,096	+				-0.3
2,578,096	+				-0.5
2,578,097	-				-1.0
2,578,097	-				-2.0
2,578,097	-				-0.9
2,578,097	-				+1.3
2,578,097	-				+1.0
2,578,097	-				-0.9
2,578,097	-				+0.4
2,578,097	-				+0.3
2,578,097	-				-0.1
2,578,097	-				-1.0
2,578,097	-				-0.3
2,578,108	+				-0.9
2,578,109	-				-0.1
2,578,197	-				-2.3
2,578,197	-				-2.5
2,578,198	+				+0.7
2,578,198	+				+0.4
2,578,198	+				-2.6
2,578,198	+				-2.5
2,578,199	-				-1.6
2,578,199	-				-2.0
2,578,199	-				-2.0
2,578,199	-				-1.1
2,578,199	-				-2.7
2,578,199	-				+0.1
2,578,199	-				+0.3
2,578,199	-				-1.3
2,578,436	+		PFLU_RS11625	0.19	-0.9
2,578,437	-		PFLU_RS11625	0.19	-0.9
2,578,443	+		PFLU_RS11625	0.19	-0.9
2,578,585	+		PFLU_RS11625	0.28	-1.5
2,578,585	+		PFLU_RS11625	0.28	-3.8
2,578,585	+		PFLU_RS11625	0.28	-1.3
2,578,585	+		PFLU_RS11625	0.28	-2.7
2,578,585	+		PFLU_RS11625	0.28	-0.9
2,578,585	+		PFLU_RS11625	0.28	-2.5
2,578,585	+		PFLU_RS11625	0.28	-0.0
2,578,585	+		PFLU_RS11625	0.28	-2.5
2,578,585	+		PFLU_RS11625	0.28	-0.3
2,578,585	+		PFLU_RS11625	0.28	-2.0
2,578,585	+		PFLU_RS11625	0.28	-1.6
2,578,585	+		PFLU_RS11625	0.28	-1.9
2,578,586	-		PFLU_RS11625	0.28	-3.2
2,578,586	-		PFLU_RS11625	0.28	+0.7
2,578,586	-		PFLU_RS11625	0.28	-2.9
2,578,586	-		PFLU_RS11625	0.28	-1.1
2,578,586	-		PFLU_RS11625	0.28	-2.1
2,578,586	-		PFLU_RS11625	0.28	-1.9
2,578,586	-		PFLU_RS11625	0.28	-1.5
2,578,586	-		PFLU_RS11625	0.28	-3.7
2,578,586	-		PFLU_RS11625	0.28	+0.7
2,578,586	-		PFLU_RS11625	0.28	-3.5
2,578,586	-		PFLU_RS11625	0.28	+0.7
2,578,586	-		PFLU_RS11625	0.28	-2.1
2,578,586	-		PFLU_RS11625	0.28	-1.4
2,578,586	-		PFLU_RS11625	0.28	-2.6
2,578,586	-		PFLU_RS11625	0.28	-0.9
2,578,759	+		PFLU_RS11625	0.38	-3.1
2,578,760	-		PFLU_RS11625	0.38	-1.0
2,578,879	+		PFLU_RS11625	0.44	-2.9
2,578,879	+		PFLU_RS11625	0.44	-2.9
2,578,882	+		PFLU_RS11625	0.45	-2.6
2,578,882	+		PFLU_RS11625	0.45	-1.5
2,578,882	+		PFLU_RS11625	0.45	-2.1
2,578,882	+		PFLU_RS11625	0.45	-1.3
2,578,882	+		PFLU_RS11625	0.45	-1.9
2,578,882	+		PFLU_RS11625	0.45	-2.9
2,578,882	+		PFLU_RS11625	0.45	-3.0
2,578,882	+		PFLU_RS11625	0.45	-0.9
2,578,882	+		PFLU_RS11625	0.45	+0.5
2,578,883	-		PFLU_RS11625	0.45	-3.1
2,578,883	-		PFLU_RS11625	0.45	-1.8
2,578,883	-		PFLU_RS11625	0.45	-3.0
2,578,883	-		PFLU_RS11625	0.45	-3.0
2,579,118	+		PFLU_RS11625	0.58	-2.1
2,579,138	+		PFLU_RS11625	0.59	-1.9
2,579,138	+		PFLU_RS11625	0.59	-3.5
2,579,138	+		PFLU_RS11625	0.59	-1.9
2,579,138	+		PFLU_RS11625	0.59	-2.6
2,579,138	+		PFLU_RS11625	0.59	+0.3
2,579,138	+		PFLU_RS11625	0.59	-3.4
2,579,138	+		PFLU_RS11625	0.59	-2.9
2,579,138	+		PFLU_RS11625	0.59	-1.3
2,579,138	+		PFLU_RS11625	0.59	-0.3
2,579,139	-		PFLU_RS11625	0.59	-1.7
2,579,139	-		PFLU_RS11625	0.59	-1.3
2,579,139	-		PFLU_RS11625	0.59	-3.9
2,579,139	-		PFLU_RS11625	0.59	-1.6
2,579,139	-		PFLU_RS11625	0.59	-1.6
2,579,152	+		PFLU_RS11625	0.60	-3.1
2,579,152	+		PFLU_RS11625	0.60	-2.5
2,579,153	-		PFLU_RS11625	0.60	-2.5
2,579,153	-		PFLU_RS11625	0.60	-0.6
2,579,337	+		PFLU_RS11625	0.71	+0.7
2,579,337	+		PFLU_RS11625	0.71	-1.3
2,579,337	+		PFLU_RS11625	0.71	-1.7
2,579,338	-		PFLU_RS11625	0.71	-2.6
2,579,338	-		PFLU_RS11625	0.71	-2.6
2,579,425	-		PFLU_RS11625	0.76	-2.1
2,579,869	+				-1.9
2,579,932	+				-1.3
2,579,941	+				-1.5
2,579,965	-				+0.7
2,579,965	-				-1.7
2,579,965	-				-0.1
2,580,007	+				-1.5
2,580,008	-				-2.5
2,580,009	+				+0.7
2,580,010	-				-2.0
2,580,057	+				-2.5
2,580,220	+		PFLU_RS11630	0.14	-1.3
2,580,221	-		PFLU_RS11630	0.14	-1.8
2,580,221	-		PFLU_RS11630	0.14	-1.3
2,580,221	-		PFLU_RS11630	0.14	-2.9
2,580,221	-		PFLU_RS11630	0.14	+0.4
2,580,221	-		PFLU_RS11630	0.14	-0.7
2,580,352	+		PFLU_RS11630	0.24	-1.3
2,580,352	+		PFLU_RS11630	0.24	-1.7
2,580,352	+		PFLU_RS11630	0.24	-1.2
2,580,352	+		PFLU_RS11630	0.24	-0.7
2,580,352	+		PFLU_RS11630	0.24	-1.2
2,580,353	-		PFLU_RS11630	0.24	-0.9
2,580,353	-		PFLU_RS11630	0.24	-2.1
2,580,353	-		PFLU_RS11630	0.24	-2.0
2,580,409	+		PFLU_RS11630	0.28	-0.3
2,580,409	+		PFLU_RS11630	0.28	-2.7
2,580,409	+		PFLU_RS11630	0.28	-0.3
2,580,409	+		PFLU_RS11630	0.28	-1.0
2,580,409	+		PFLU_RS11630	0.28	-1.4
2,580,410	-		PFLU_RS11630	0.28	-2.7
2,580,410	-		PFLU_RS11630	0.28	-2.9
2,580,410	-		PFLU_RS11630	0.28	-2.1
2,580,410	-		PFLU_RS11630	0.28	-1.6
2,580,412	+		PFLU_RS11630	0.28	-0.6
2,580,412	+		PFLU_RS11630	0.28	-0.0
2,580,412	+		PFLU_RS11630	0.28	-0.5
2,580,412	+		PFLU_RS11630	0.28	-1.2
2,580,413	-		PFLU_RS11630	0.28	-1.3
2,580,413	-		PFLU_RS11630	0.28	-1.9
2,580,413	-		PFLU_RS11630	0.28	-2.7
2,580,413	-		PFLU_RS11630	0.28	-0.9
2,580,413	-		PFLU_RS11630	0.28	-2.1
2,580,413	-		PFLU_RS11630	0.28	+0.7
2,580,413	-		PFLU_RS11630	0.28	-1.5
2,580,413	-		PFLU_RS11630	0.28	-0.3
2,580,616	+		PFLU_RS11630	0.44	-0.5
2,580,616	+		PFLU_RS11630	0.44	-1.0
2,580,778	+		PFLU_RS11630	0.56	-0.5
2,580,778	+		PFLU_RS11630	0.56	-0.1
2,580,778	+		PFLU_RS11630	0.56	+0.7
2,580,779	-		PFLU_RS11630	0.56	-2.7
2,580,802	+		PFLU_RS11630	0.58	-2.2
2,580,803	-		PFLU_RS11630	0.58	+0.7
2,580,803	-		PFLU_RS11630	0.58	-1.2