Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS30260

Experiment: Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.8X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.8X
2,342,548	+		BPHYT_RS30255	0.35	-0.1
2,342,549	-		BPHYT_RS30255	0.35	-1.1
2,342,551	+		BPHYT_RS30255	0.36	+0.2
2,342,977	+				+0.5
2,343,003	+				+0.2
2,343,199	+		BPHYT_RS30260	0.54	+0.7
2,343,202	+		BPHYT_RS30260	0.55	+0.0
2,343,203	-		BPHYT_RS30260	0.55	+0.7
2,343,203	-		BPHYT_RS30260	0.55	+1.5
2,343,253	+		BPHYT_RS30260	0.71	-1.5
2,343,395	-				-0.3
2,343,751	-		BPHYT_RS30265	0.69	-0.3
2,343,885	-				+0.4
2,343,885	-				-0.2
2,343,950	-				-0.7
2,343,966	+				+0.4
2,344,001	+				-0.6
2,344,002	-				-0.8
2,344,074	-				-0.3
2,344,244	+				-0.9