Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS25760

Experiment: Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.8X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.8X
1,351,843	+				-0.7
1,351,888	+				-0.8
1,351,957	-				-1.7
1,352,769	-		BPHYT_RS25760	0.64	-1.0
1,352,870	+		BPHYT_RS25760	0.72	+0.3
1,353,040	-		BPHYT_RS25760	0.86	-0.2
1,353,055	-		BPHYT_RS25760	0.87	+0.2
1,353,055	-		BPHYT_RS25760	0.87	-1.3
1,353,210	-				+0.7
1,353,210	-				-0.4
1,353,247	+				-1.3
1,353,247	+				+0.4
1,353,252	-				-0.1
1,353,256	-				-0.8
1,353,256	-				-2.5
1,353,274	-				-0.3
1,353,394	+				+0.3
1,353,649	-		BPHYT_RS25765	0.20	-0.9
1,353,655	+		BPHYT_RS25765	0.20	-0.1
1,353,746	-		BPHYT_RS25765	0.27	+0.7
1,353,746	-		BPHYT_RS25765	0.27	+0.1
1,353,862	+		BPHYT_RS25765	0.35	-0.2
1,353,919	+		BPHYT_RS25765	0.39	-0.3
1,353,919	+		BPHYT_RS25765	0.39	+0.5
1,354,001	+		BPHYT_RS25765	0.45	-0.6