Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS25145

Experiment: Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.8X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.8X
1,212,519	+		BPHYT_RS25135	0.68	+1.0
1,212,629	-				+1.0
1,213,031	-		BPHYT_RS25140	0.74	-1.2
1,213,082	+		BPHYT_RS25140	0.84	-0.9
1,213,193	+				-1.5
1,213,240	-				+0.5
1,213,305	+				+0.7
1,213,305	+				+0.1
1,213,373	-		BPHYT_RS25145	0.22	-0.8
1,213,396	-		BPHYT_RS25145	0.28	+0.4
1,213,473	-		BPHYT_RS25145	0.47	+0.1
1,213,740	-				+0.1
1,213,741	+				-0.6
1,214,137	+		BPHYT_RS25150	0.37	+0.1
1,214,194	+		BPHYT_RS25150	0.42	+0.2
1,214,240	-		BPHYT_RS25150	0.46	-0.2
1,214,681	-		BPHYT_RS25150	0.84	+0.2