Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS03955

Experiment: Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.8X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.8X
895,296	-				-0.0
895,454	-				+0.8
895,630	+				-0.1
896,442	-		BPHYT_RS03955	0.27	+0.6
896,732	+		BPHYT_RS03955	0.53	+0.0
896,734	+		BPHYT_RS03955	0.53	+0.1
896,841	-		BPHYT_RS03955	0.63	+0.1
897,420	+				-0.3
897,637	+		BPHYT_RS03960	0.15	+0.2
897,637	+		BPHYT_RS03960	0.15	+0.6
897,638	-		BPHYT_RS03960	0.15	-0.4
897,923	+		BPHYT_RS03960	0.27	+0.0
897,923	+		BPHYT_RS03960	0.27	+1.1
897,924	-		BPHYT_RS03960	0.27	+0.2
898,002	+		BPHYT_RS03960	0.30	+0.1