Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS26355
Experiment: Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.8X
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.8X |
---|---|---|---|---|---|
remove | |||||
1,484,302 | + | -1.0 | |||
1,484,303 | - | -0.1 | |||
1,484,773 | - | BPHYT_RS26345 | 0.67 | +0.0 | |
1,485,248 | - | +0.1 | |||
1,485,467 | + | BPHYT_RS26355 | 0.67 | -0.6 | |
1,485,492 | - | BPHYT_RS26355 | 0.78 | +1.2 |
Or see this region's nucleotide sequence