Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS25015

Experiment: Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.8X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.8X
1,181,336	-		BPHYT_RS25010	0.52	-0.1
1,181,441	-		BPHYT_RS25010	0.59	+0.1
1,181,503	+		BPHYT_RS25010	0.64	+0.2
1,181,504	-		BPHYT_RS25010	0.64	+0.4
1,181,519	-		BPHYT_RS25010	0.65	+0.2
1,181,672	-		BPHYT_RS25010	0.76	-0.1
1,181,672	-		BPHYT_RS25010	0.76	-0.6
1,181,897	-				-0.2
1,181,901	+				-0.1
1,181,909	+				-0.2
1,181,910	-				-0.1
1,182,097	-				+1.1
1,182,201	-				-0.3
1,182,513	+		BPHYT_RS25015	0.46	-0.3
1,182,513	+		BPHYT_RS25015	0.46	+0.3
1,182,707	+		BPHYT_RS25015	0.81	+0.1
1,182,815	+				-0.1
1,182,815	+				+0.3
1,182,829	+				+0.6
1,183,248	+		BPHYT_RS25020	0.81	-0.4
1,183,414	-				+0.1
1,183,448	-				-0.9