Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS23340

Experiment: Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.8X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.8X
795,513	+				+0.6
795,570	-				-0.5
795,973	+				+1.3
796,003	+				-0.6
796,004	-				+0.2
796,082	+				+0.8
796,119	+				+0.5
796,119	+				+0.2
796,437	+		BPHYT_RS23340	0.15	-0.1
796,449	+		BPHYT_RS23340	0.15	+0.5
796,617	+		BPHYT_RS23340	0.23	+0.2
796,647	+		BPHYT_RS23340	0.24	+0.2
796,936	-		BPHYT_RS23340	0.37	+0.6
796,989	+		BPHYT_RS23340	0.39	-0.1
797,046	+		BPHYT_RS23340	0.42	-1.7
797,055	+		BPHYT_RS23340	0.42	+0.2
797,520	+		BPHYT_RS23340	0.63	+0.1
797,521	-		BPHYT_RS23340	0.63	+0.1
797,886	+		BPHYT_RS23340	0.79	-0.0
798,426	-				-0.7
798,757	+		BPHYT_RS23345	0.25	+0.1
799,329	-		BPHYT_RS23345	0.69	-0.3