Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS13915

Experiment: Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.8X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.8X
3,176,654	-		BPHYT_RS13910	0.72	-0.8
3,176,847	-		BPHYT_RS13910	0.81	+0.1
3,177,240	-				+1.1
3,177,683	+		BPHYT_RS13915	0.23	-0.1
3,178,024	+		BPHYT_RS13915	0.40	+0.1
3,178,723	+				+0.7
3,179,009	-				-0.1
3,179,009	-				+0.2
3,179,230	+				-0.1
3,179,399	+		BPHYT_RS13920	0.21	-0.0
3,179,399	+		BPHYT_RS13920	0.21	+0.0
3,179,426	+		BPHYT_RS13920	0.24	+0.1
3,179,493	+		BPHYT_RS13920	0.31	+0.4
3,179,525	+		BPHYT_RS13920	0.34	-0.4
3,179,612	+		BPHYT_RS13920	0.44	+0.4
3,179,613	-		BPHYT_RS13920	0.44	-0.2
3,179,644	+		BPHYT_RS13920	0.47	+0.4
3,179,644	+		BPHYT_RS13920	0.47	-0.1