Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS11880

Experiment: Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.8X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.8X
2,700,597	+		BPHYT_RS11875	0.70	+0.1
2,701,132	+				+1.3
2,701,133	-				+0.5
2,701,263	+				+0.7
2,701,311	-				-0.1
2,701,867	+		BPHYT_RS11880	0.17	+1.3
2,701,941	-		BPHYT_RS11880	0.21	-0.0
2,701,966	-		BPHYT_RS11880	0.22	-0.1
2,702,638	+		BPHYT_RS11880	0.53	-0.4
2,702,639	-		BPHYT_RS11880	0.53	+0.4
2,702,732	+		BPHYT_RS11880	0.57	+0.4
2,702,993	+		BPHYT_RS11880	0.69	+0.3
2,703,165	+		BPHYT_RS11880	0.77	-0.3
2,703,283	-		BPHYT_RS11880	0.82	-0.5
2,703,293	+		BPHYT_RS11880	0.83	+0.1
2,703,293	+		BPHYT_RS11880	0.83	-0.2
2,703,505	+				-1.0
2,703,512	+				-1.0
2,703,646	-				-0.3
2,704,196	+		BPHYT_RS11885	0.71	-0.4
2,704,337	+				+0.8
2,704,527	+				-0.0