Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS30935

Experiment: Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.8X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.8X
2,494,463	-		BPHYT_RS30930	0.81	+0.8
2,495,011	-				-0.2
2,495,192	+				-0.8
2,495,193	-				+0.2
2,495,193	-				-0.4
2,495,193	-				+0.2
2,496,038	+		BPHYT_RS30935	0.58	+0.3
2,496,450	-		BPHYT_RS30935	0.89	+0.3
2,496,451	+		BPHYT_RS30935	0.89	+0.6
2,496,524	+				-1.0
2,496,524	+				-0.1
2,496,525	-				+0.3
2,496,763	+		BPHYT_RS30940	0.12	-0.4
2,497,331	-		BPHYT_RS30940	0.71	+0.2
2,497,331	-		BPHYT_RS30940	0.71	-0.4
2,497,341	-		BPHYT_RS30940	0.72	+0.3
2,497,341	-		BPHYT_RS30940	0.72	-0.3
2,497,447	+		BPHYT_RS30940	0.83	+0.2