Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS26310

Experiment: Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.8X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.8X
1,473,674	-		BPHYT_RS26305	0.56	-0.2
1,474,011	+		BPHYT_RS26305	0.85	-0.5
1,474,092	+				-0.1
1,474,113	+				-0.7
1,474,114	-				-0.3
1,474,171	+				+0.5
1,474,171	+				-0.3
1,474,240	+				-0.2
1,474,337	-				+0.1
1,474,440	+				-0.1
1,474,440	+				-0.7
1,474,442	+				+0.3
1,474,442	+				-1.3
1,474,442	+				+0.1
1,474,533	-		BPHYT_RS26310	0.13	+0.1
1,474,536	-		BPHYT_RS26310	0.14	-0.2
1,475,256	-				+0.1
1,475,373	-				-0.5
1,475,576	+		BPHYT_RS26315	0.16	-0.0
1,475,816	+		BPHYT_RS26315	0.46	-2.2
1,475,834	+		BPHYT_RS26315	0.48	+0.5
1,475,895	-		BPHYT_RS26315	0.55	-0.4
1,475,895	-		BPHYT_RS26315	0.55	-0.5
1,476,252	-				+0.4
1,476,252	-				+0.2