Strain Fitness in Burkholderia phytofirmans PsJN around BPHYT_RS04385

Experiment: Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.8X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Supernatant; Trichoderma atroviride IMI tmk3mutant grown in Vogels_fungal_media, filtered; 0.8X
1,009,652	-				-1.8
1,009,711	-				+1.5
1,009,731	+				-0.8
1,009,736	-				-3.0
1,009,952	-		BPHYT_RS04385	0.17	-3.7
1,010,029	-		BPHYT_RS04385	0.21	-0.5
1,010,435	+		BPHYT_RS04385	0.43	-0.8
1,010,587	-		BPHYT_RS04385	0.51	-1.5
1,010,793	+		BPHYT_RS04385	0.62	-1.1
1,011,201	+		BPHYT_RS04385	0.84	-2.7
1,011,473	+				-0.4
1,011,473	+				+0.9
1,011,474	-				+1.0