Experiment: R2A control
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BPHYT_RS09080 and BPHYT_RS09085 are separated by 124 nucleotides BPHYT_RS09085 and BPHYT_RS09090 are separated by 75 nucleotides
BPHYT_RS09080: BPHYT_RS09080 - ABC transporter substrate-binding protein, at 2,054,851 to 2,055,888
_RS09080
BPHYT_RS09085: BPHYT_RS09085 - mannosyltransferase, at 2,056,013 to 2,056,825
_RS09085
BPHYT_RS09090: BPHYT_RS09090 - ABC transporter permease, at 2,056,901 to 2,057,725
_RS09090
Position (kb)
2056
2057 Strain fitness (log2 ratio)
-2
-1
0
1 at 2055.023 kb on - strand, within BPHYT_RS09080 at 2055.023 kb on - strand, within BPHYT_RS09080 at 2055.135 kb on + strand, within BPHYT_RS09080 at 2055.238 kb on + strand, within BPHYT_RS09080 at 2055.238 kb on + strand, within BPHYT_RS09080 at 2055.239 kb on - strand, within BPHYT_RS09080 at 2055.493 kb on - strand, within BPHYT_RS09080 at 2055.529 kb on - strand, within BPHYT_RS09080 at 2055.547 kb on + strand, within BPHYT_RS09080 at 2055.548 kb on - strand, within BPHYT_RS09080 at 2055.548 kb on - strand, within BPHYT_RS09080 at 2055.676 kb on + strand, within BPHYT_RS09080 at 2055.700 kb on + strand, within BPHYT_RS09080 at 2055.700 kb on + strand, within BPHYT_RS09080 at 2056.163 kb on - strand, within BPHYT_RS09085 at 2056.224 kb on + strand, within BPHYT_RS09085 at 2056.268 kb on - strand, within BPHYT_RS09085 at 2056.268 kb on - strand, within BPHYT_RS09085 at 2056.268 kb on - strand, within BPHYT_RS09085 at 2056.800 kb on - strand at 2056.829 kb on + strand at 2056.865 kb on - strand at 2057.112 kb on - strand, within BPHYT_RS09090 at 2057.235 kb on - strand, within BPHYT_RS09090 at 2057.366 kb on + strand, within BPHYT_RS09090 at 2057.494 kb on + strand, within BPHYT_RS09090 at 2057.495 kb on - strand, within BPHYT_RS09090 at 2057.537 kb on + strand, within BPHYT_RS09090 at 2057.538 kb on - strand, within BPHYT_RS09090 at 2057.602 kb on + strand, within BPHYT_RS09090 at 2057.603 kb on - strand, within BPHYT_RS09090 at 2057.603 kb on - strand, within BPHYT_RS09090
Per-strain Table
Position Strand Gene LocusTag Fraction R2A control remove 2,055,023 - BPHYT_RS09080 0.17 -0.6 2,055,023 - BPHYT_RS09080 0.17 +0.8 2,055,135 + BPHYT_RS09080 0.27 -0.0 2,055,238 + BPHYT_RS09080 0.37 +0.3 2,055,238 + BPHYT_RS09080 0.37 -0.6 2,055,239 - BPHYT_RS09080 0.37 -0.5 2,055,493 - BPHYT_RS09080 0.62 -0.1 2,055,529 - BPHYT_RS09080 0.65 +0.2 2,055,547 + BPHYT_RS09080 0.67 -0.2 2,055,548 - BPHYT_RS09080 0.67 +0.6 2,055,548 - BPHYT_RS09080 0.67 +0.0 2,055,676 + BPHYT_RS09080 0.79 +0.3 2,055,700 + BPHYT_RS09080 0.82 +0.5 2,055,700 + BPHYT_RS09080 0.82 -0.6 2,056,163 - BPHYT_RS09085 0.18 +0.7 2,056,224 + BPHYT_RS09085 0.26 +0.6 2,056,268 - BPHYT_RS09085 0.31 +0.3 2,056,268 - BPHYT_RS09085 0.31 +1.2 2,056,268 - BPHYT_RS09085 0.31 +0.3 2,056,800 - -0.7 2,056,829 + -0.9 2,056,865 - +1.3 2,057,112 - BPHYT_RS09090 0.26 +0.4 2,057,235 - BPHYT_RS09090 0.40 -0.2 2,057,366 + BPHYT_RS09090 0.56 -0.4 2,057,494 + BPHYT_RS09090 0.72 +0.2 2,057,495 - BPHYT_RS09090 0.72 -2.2 2,057,537 + BPHYT_RS09090 0.77 -0.2 2,057,538 - BPHYT_RS09090 0.77 -0.1 2,057,602 + BPHYT_RS09090 0.85 +0.4 2,057,603 - BPHYT_RS09090 0.85 +0.2 2,057,603 - BPHYT_RS09090 0.85 -0.7
Or see this region's nucleotide sequence