Experiment: No vitamins t2
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_4205 and Psest_4206 are separated by 72 nucleotides Psest_4206 and Psest_4207 are separated by 120 nucleotides
Psest_4205: Psest_4205 - NAD/NADP transhydrogenase beta subunit, at 4,382,926 to 4,384,362
_4205
Psest_4206: Psest_4206 - Putative NADPH-quinone reductase (modulator of drug activity B), at 4,384,435 to 4,385,025
_4206
Psest_4207: Psest_4207 - Predicted Na+-dependent transporter, at 4,385,146 to 4,386,135
_4207
Position (kb)
4384
4385
4386 Strain fitness (log2 ratio)
-2
-1
0
1
2
3
4 at 4383.508 kb on + strand, within Psest_4205 at 4383.508 kb on + strand, within Psest_4205 at 4383.634 kb on + strand, within Psest_4205 at 4383.634 kb on + strand, within Psest_4205 at 4383.635 kb on - strand, within Psest_4205 at 4383.635 kb on - strand, within Psest_4205 at 4383.733 kb on + strand, within Psest_4205 at 4383.733 kb on + strand, within Psest_4205 at 4383.733 kb on + strand, within Psest_4205 at 4383.733 kb on + strand, within Psest_4205 at 4383.733 kb on + strand, within Psest_4205 at 4383.733 kb on + strand, within Psest_4205 at 4383.733 kb on + strand, within Psest_4205 at 4383.733 kb on + strand, within Psest_4205 at 4383.733 kb on + strand, within Psest_4205 at 4383.733 kb on + strand, within Psest_4205 at 4383.733 kb on + strand, within Psest_4205 at 4383.733 kb on + strand, within Psest_4205 at 4383.733 kb on + strand, within Psest_4205 at 4383.734 kb on - strand, within Psest_4205 at 4383.734 kb on - strand, within Psest_4205 at 4383.734 kb on - strand, within Psest_4205 at 4383.734 kb on - strand, within Psest_4205 at 4383.734 kb on - strand, within Psest_4205 at 4383.734 kb on - strand, within Psest_4205 at 4383.734 kb on - strand, within Psest_4205 at 4383.734 kb on - strand, within Psest_4205 at 4383.734 kb on - strand, within Psest_4205 at 4383.734 kb on - strand, within Psest_4205 at 4383.734 kb on - strand, within Psest_4205 at 4383.994 kb on + strand, within Psest_4205 at 4383.995 kb on - strand, within Psest_4205 at 4384.040 kb on + strand, within Psest_4205 at 4384.040 kb on + strand, within Psest_4205 at 4384.040 kb on + strand, within Psest_4205 at 4384.040 kb on + strand, within Psest_4205 at 4384.040 kb on + strand, within Psest_4205 at 4384.041 kb on - strand, within Psest_4205 at 4384.041 kb on - strand, within Psest_4205 at 4384.041 kb on - strand, within Psest_4205 at 4384.041 kb on - strand, within Psest_4205 at 4384.041 kb on - strand, within Psest_4205 at 4384.213 kb on + strand, within Psest_4205 at 4384.213 kb on + strand, within Psest_4205 at 4384.213 kb on + strand, within Psest_4205 at 4384.213 kb on + strand, within Psest_4205 at 4384.213 kb on + strand, within Psest_4205 at 4384.213 kb on + strand, within Psest_4205 at 4384.213 kb on + strand, within Psest_4205 at 4384.213 kb on + strand, within Psest_4205 at 4384.213 kb on + strand, within Psest_4205 at 4384.213 kb on + strand, within Psest_4205 at 4384.214 kb on - strand, within Psest_4205 at 4384.288 kb on + strand at 4384.288 kb on + strand at 4384.288 kb on + strand at 4384.288 kb on + strand at 4384.288 kb on + strand at 4384.288 kb on + strand at 4384.288 kb on + strand at 4384.289 kb on - strand at 4384.289 kb on - strand at 4384.289 kb on - strand at 4384.289 kb on - strand at 4384.289 kb on - strand at 4384.584 kb on - strand, within Psest_4206 at 4384.584 kb on - strand, within Psest_4206 at 4384.670 kb on + strand, within Psest_4206 at 4384.670 kb on + strand, within Psest_4206 at 4384.670 kb on + strand, within Psest_4206 at 4384.670 kb on + strand, within Psest_4206 at 4384.671 kb on - strand, within Psest_4206 at 4384.671 kb on - strand, within Psest_4206 at 4384.671 kb on - strand, within Psest_4206 at 4384.703 kb on + strand, within Psest_4206 at 4384.703 kb on + strand, within Psest_4206 at 4384.703 kb on + strand, within Psest_4206 at 4384.704 kb on - strand, within Psest_4206 at 4384.704 kb on - strand, within Psest_4206 at 4384.704 kb on - strand, within Psest_4206 at 4384.784 kb on + strand, within Psest_4206 at 4384.784 kb on + strand, within Psest_4206 at 4384.785 kb on - strand, within Psest_4206 at 4384.785 kb on - strand, within Psest_4206 at 4384.832 kb on + strand, within Psest_4206 at 4384.832 kb on + strand, within Psest_4206 at 4384.832 kb on + strand, within Psest_4206 at 4384.833 kb on - strand, within Psest_4206 at 4384.833 kb on - strand, within Psest_4206 at 4384.833 kb on - strand, within Psest_4206 at 4384.967 kb on + strand at 4384.968 kb on - strand at 4384.968 kb on - strand at 4384.968 kb on - strand at 4385.008 kb on + strand at 4385.133 kb on + strand at 4385.134 kb on - strand at 4385.504 kb on + strand, within Psest_4207 at 4385.504 kb on + strand, within Psest_4207 at 4385.504 kb on + strand, within Psest_4207 at 4385.504 kb on + strand, within Psest_4207 at 4385.505 kb on - strand, within Psest_4207 at 4385.505 kb on - strand, within Psest_4207 at 4385.505 kb on - strand, within Psest_4207 at 4385.505 kb on - strand, within Psest_4207 at 4385.757 kb on + strand, within Psest_4207 at 4385.823 kb on - strand, within Psest_4207 at 4385.823 kb on - strand, within Psest_4207 at 4385.823 kb on - strand, within Psest_4207 at 4385.823 kb on - strand, within Psest_4207 at 4385.837 kb on + strand, within Psest_4207 at 4385.838 kb on - strand, within Psest_4207 at 4385.838 kb on - strand, within Psest_4207 at 4385.838 kb on - strand, within Psest_4207 at 4385.838 kb on - strand, within Psest_4207 at 4385.838 kb on - strand, within Psest_4207 at 4385.838 kb on - strand, within Psest_4207 at 4385.838 kb on - strand, within Psest_4207 at 4385.838 kb on - strand, within Psest_4207
Per-strain Table
Position Strand Gene LocusTag Fraction No vitamins t2 remove 4,383,508 + Psest_4205 0.41 -0.4 4,383,508 + Psest_4205 0.41 -1.2 4,383,634 + Psest_4205 0.49 +0.6 4,383,634 + Psest_4205 0.49 +2.2 4,383,635 - Psest_4205 0.49 +2.0 4,383,635 - Psest_4205 0.49 -0.0 4,383,733 + Psest_4205 0.56 -1.4 4,383,733 + Psest_4205 0.56 -2.1 4,383,733 + Psest_4205 0.56 +0.6 4,383,733 + Psest_4205 0.56 -0.0 4,383,733 + Psest_4205 0.56 +2.3 4,383,733 + Psest_4205 0.56 -1.4 4,383,733 + Psest_4205 0.56 +2.2 4,383,733 + Psest_4205 0.56 -1.0 4,383,733 + Psest_4205 0.56 -0.0 4,383,733 + Psest_4205 0.56 +1.5 4,383,733 + Psest_4205 0.56 +0.8 4,383,733 + Psest_4205 0.56 -1.7 4,383,733 + Psest_4205 0.56 +0.6 4,383,734 - Psest_4205 0.56 +1.8 4,383,734 - Psest_4205 0.56 -0.2 4,383,734 - Psest_4205 0.56 +0.7 4,383,734 - Psest_4205 0.56 -1.5 4,383,734 - Psest_4205 0.56 +1.1 4,383,734 - Psest_4205 0.56 +0.8 4,383,734 - Psest_4205 0.56 -2.6 4,383,734 - Psest_4205 0.56 +0.6 4,383,734 - Psest_4205 0.56 -0.7 4,383,734 - Psest_4205 0.56 -2.7 4,383,734 - Psest_4205 0.56 -0.6 4,383,994 + Psest_4205 0.74 +0.2 4,383,995 - Psest_4205 0.74 +1.4 4,384,040 + Psest_4205 0.78 -1.0 4,384,040 + Psest_4205 0.78 -0.7 4,384,040 + Psest_4205 0.78 +0.6 4,384,040 + Psest_4205 0.78 +0.6 4,384,040 + Psest_4205 0.78 +1.3 4,384,041 - Psest_4205 0.78 +1.6 4,384,041 - Psest_4205 0.78 +0.6 4,384,041 - Psest_4205 0.78 +1.4 4,384,041 - Psest_4205 0.78 -0.2 4,384,041 - Psest_4205 0.78 +2.2 4,384,213 + Psest_4205 0.90 +0.9 4,384,213 + Psest_4205 0.90 -2.2 4,384,213 + Psest_4205 0.90 +4.3 4,384,213 + Psest_4205 0.90 -0.8 4,384,213 + Psest_4205 0.90 +1.2 4,384,213 + Psest_4205 0.90 +1.2 4,384,213 + Psest_4205 0.90 +0.2 4,384,213 + Psest_4205 0.90 +0.4 4,384,213 + Psest_4205 0.90 -0.8 4,384,213 + Psest_4205 0.90 -1.0 4,384,214 - Psest_4205 0.90 -2.6 4,384,288 + -0.7 4,384,288 + -0.7 4,384,288 + -0.2 4,384,288 + +1.2 4,384,288 + +1.2 4,384,288 + -1.4 4,384,288 + -0.0 4,384,289 - +3.2 4,384,289 - -1.4 4,384,289 - +2.2 4,384,289 - -0.4 4,384,289 - -0.4 4,384,584 - Psest_4206 0.25 -1.3 4,384,584 - Psest_4206 0.25 -1.7 4,384,670 + Psest_4206 0.40 +0.6 4,384,670 + Psest_4206 0.40 +1.0 4,384,670 + Psest_4206 0.40 -1.0 4,384,670 + Psest_4206 0.40 -1.3 4,384,671 - Psest_4206 0.40 +1.0 4,384,671 - Psest_4206 0.40 -1.3 4,384,671 - Psest_4206 0.40 -0.0 4,384,703 + Psest_4206 0.45 +1.0 4,384,703 + Psest_4206 0.45 -2.2 4,384,703 + Psest_4206 0.45 +1.2 4,384,704 - Psest_4206 0.46 +0.1 4,384,704 - Psest_4206 0.46 -1.2 4,384,704 - Psest_4206 0.46 +0.1 4,384,784 + Psest_4206 0.59 -0.1 4,384,784 + Psest_4206 0.59 +0.1 4,384,785 - Psest_4206 0.59 +0.2 4,384,785 - Psest_4206 0.59 +0.6 4,384,832 + Psest_4206 0.67 -1.9 4,384,832 + Psest_4206 0.67 -0.6 4,384,832 + Psest_4206 0.67 +1.7 4,384,833 - Psest_4206 0.67 -0.0 4,384,833 - Psest_4206 0.67 +2.3 4,384,833 - Psest_4206 0.67 +1.3 4,384,967 + -0.7 4,384,968 - +1.9 4,384,968 - -2.0 4,384,968 - +0.6 4,385,008 + -0.9 4,385,133 + -1.0 4,385,134 - +0.3 4,385,504 + Psest_4207 0.36 -1.7 4,385,504 + Psest_4207 0.36 -0.4 4,385,504 + Psest_4207 0.36 +0.7 4,385,504 + Psest_4207 0.36 +0.8 4,385,505 - Psest_4207 0.36 -2.7 4,385,505 - Psest_4207 0.36 +0.4 4,385,505 - Psest_4207 0.36 -0.2 4,385,505 - Psest_4207 0.36 -0.2 4,385,757 + Psest_4207 0.62 -0.0 4,385,823 - Psest_4207 0.68 +2.9 4,385,823 - Psest_4207 0.68 -0.6 4,385,823 - Psest_4207 0.68 +0.3 4,385,823 - Psest_4207 0.68 +1.6 4,385,837 + Psest_4207 0.70 +3.8 4,385,838 - Psest_4207 0.70 +1.5 4,385,838 - Psest_4207 0.70 +0.8 4,385,838 - Psest_4207 0.70 +1.6 4,385,838 - Psest_4207 0.70 -0.4 4,385,838 - Psest_4207 0.70 -0.4 4,385,838 - Psest_4207 0.70 -1.4 4,385,838 - Psest_4207 0.70 +0.6 4,385,838 - Psest_4207 0.70 -2.0
Or see this region's nucleotide sequence