Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_2504

Experiment: With vitamins t2

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	With vitamins t2
2,677,066	+		Psest_2501	0.64	-1.4
2,677,066	+		Psest_2501	0.64	-2.9
2,677,066	+		Psest_2501	0.64	+1.1
2,677,066	+		Psest_2501	0.64	-0.9
2,677,067	-		Psest_2501	0.65	-0.1
2,677,067	-		Psest_2501	0.65	+0.0
2,677,067	-		Psest_2501	0.65	-1.9
2,677,104	+		Psest_2501	0.75	-0.0
2,677,104	+		Psest_2501	0.75	-0.0
2,677,104	+		Psest_2501	0.75	-0.1
2,677,104	+		Psest_2501	0.75	-0.2
2,677,105	-		Psest_2501	0.76	-0.8
2,677,105	-		Psest_2501	0.76	-1.2
2,677,105	-		Psest_2501	0.76	-0.9
2,677,105	-		Psest_2501	0.76	-0.6
2,677,105	-		Psest_2501	0.76	-1.7
2,677,105	-		Psest_2501	0.76	+1.1
2,677,131	+		Psest_2501	0.83	+0.1
2,677,132	-		Psest_2501	0.84	+0.5
2,677,132	-		Psest_2501	0.84	+2.1
2,677,132	-		Psest_2501	0.84	+0.5
2,677,132	-		Psest_2501	0.84	-0.8
2,677,132	-		Psest_2501	0.84	+0.5
2,677,132	-		Psest_2501	0.84	-1.9
2,677,167	+				-1.9
2,677,167	+				-1.4
2,677,167	+				+1.1
2,677,167	+				+1.3
2,677,167	+				-1.0
2,677,167	+				-0.3
2,677,167	+				+0.6
2,677,167	+				-0.2
2,677,167	+				-0.7
2,677,168	-				-0.6
2,677,168	-				-2.7
2,677,168	-				-2.2
2,677,168	-				+0.3
2,677,168	-				+0.1
2,677,168	-				-1.4
2,677,168	-				+0.7
2,677,168	-				+0.9
2,677,172	+				+0.3
2,677,172	+				+0.1
2,677,172	+				+1.1
2,677,173	-				+1.7
2,677,185	+				-1.4
2,677,303	+				-0.7
2,677,304	-				-2.2
2,677,421	+		Psest_2502	0.48	+1.0
2,677,421	+		Psest_2502	0.48	-0.1
2,677,421	+		Psest_2502	0.48	-2.7
2,677,421	+		Psest_2502	0.48	+1.6
2,677,421	+		Psest_2502	0.48	-1.2
2,677,421	+		Psest_2502	0.48	-0.2
2,677,421	+		Psest_2502	0.48	+0.9
2,677,421	+		Psest_2502	0.48	+0.9
2,677,421	+		Psest_2502	0.48	-1.7
2,677,421	+		Psest_2502	0.48	+1.1
2,677,422	-		Psest_2502	0.49	-1.0
2,677,422	-		Psest_2502	0.49	+0.1
2,677,523	+		Psest_2502	0.84	-1.4
2,677,546	+				+2.4
2,677,547	-				-0.9
2,677,547	-				+1.9
2,677,547	-				-1.7
2,677,547	-				+1.8
2,677,647	-				+0.2
2,677,647	-				+0.5
2,677,724	+				+1.0
2,677,725	-				+1.3
2,677,726	+				+1.2
2,677,726	+				+2.5
2,677,726	+				+0.0
2,677,727	-				+0.5
2,677,727	-				+0.5
2,677,727	-				+2.6
2,677,727	-				+2.5
2,677,727	-				+0.9
2,677,727	-				-2.2
2,677,819	+		Psest_2503	0.37	-0.4
2,677,820	-		Psest_2503	0.37	+2.4
2,677,820	-		Psest_2503	0.37	-0.1
2,677,820	-		Psest_2503	0.37	+1.3
2,677,820	-		Psest_2503	0.37	+3.2
2,677,821	+		Psest_2503	0.38	-1.0
2,677,821	+		Psest_2503	0.38	+0.3
2,677,821	+		Psest_2503	0.38	+1.3
2,677,822	-		Psest_2503	0.38	+2.2
2,677,822	-		Psest_2503	0.38	-1.8
2,678,003	+				-0.8
2,678,003	+				+2.0
2,678,003	+				+1.2
2,678,004	-				-2.4
2,678,004	-				-1.2
2,678,004	-				-1.4
2,678,004	-				+1.7
2,678,004	-				+1.2
2,678,004	-				+0.4
2,678,004	-				-1.0
2,678,004	-				-1.4
2,678,042	-				+0.7
2,678,055	+				+0.6
2,678,056	-				-0.1
2,678,056	-				+0.8
2,678,062	+				-0.3
2,678,062	+				-1.2
2,678,062	+				-1.5
2,678,062	+				-1.8
2,678,062	+				+1.3
2,678,062	+				+1.6
2,678,062	+				+1.6
2,678,062	+				+0.2
2,678,063	-				-0.8
2,678,063	-				+0.9
2,678,063	-				+2.1
2,678,063	-				-2.2
2,678,063	-				-1.4
2,678,063	-				-0.3
2,678,063	-				+0.2
2,678,063	-				+1.2
2,678,063	-				+1.5
2,678,063	-				-0.5
2,678,185	-		Psest_2504	0.31	+1.3
2,678,190	+		Psest_2504	0.32	+2.4
2,678,190	+		Psest_2504	0.32	+0.5
2,678,286	-		Psest_2504	0.57	+1.2
2,678,396	+		Psest_2504	0.85	+1.7
2,678,396	+		Psest_2504	0.85	+1.8
2,678,397	-		Psest_2504	0.86	+1.9
2,678,397	-		Psest_2504	0.86	+1.9
2,678,415	-				+1.6
2,678,415	-				+1.2
2,678,448	+				+0.2
2,678,448	+				+2.8
2,678,448	+				+1.6
2,678,449	-				-1.3
2,678,477	+				+2.9
2,678,477	+				+1.5
2,678,477	+				+0.4
2,678,477	+				+1.3
2,678,477	+				+1.2
2,678,477	+				+1.1
2,678,477	+				+1.6
2,678,478	-				-0.4
2,678,478	-				-0.8
2,678,478	-				-1.7
2,678,478	-				-0.8
2,678,486	+				+0.5
2,678,486	+				+3.5
2,678,487	-				+1.2
2,678,487	-				-3.0
2,678,487	-				-0.3
2,678,487	-				+0.2
2,678,487	-				+0.8
2,678,491	-				+0.1
2,678,585	+				+1.0
2,678,586	-				-0.1
2,678,683	+				-1.4
2,678,683	+				-1.8
2,678,684	-				-0.1
2,678,684	-				+0.2
2,678,804	-		Psest_2505	0.16	+1.5
2,678,804	-		Psest_2505	0.16	+1.2
2,678,895	-		Psest_2505	0.23	+2.4
2,678,952	-		Psest_2505	0.27	-1.1
2,678,952	-		Psest_2505	0.27	+0.8
2,678,952	-		Psest_2505	0.27	-0.4
2,678,958	-		Psest_2505	0.27	+0.1
2,679,125	+		Psest_2505	0.39	+3.3
2,679,126	-		Psest_2505	0.39	+2.4
2,679,126	-		Psest_2505	0.39	+1.4
2,679,126	-		Psest_2505	0.39	+2.3
2,679,126	-		Psest_2505	0.39	+1.7
2,679,126	-		Psest_2505	0.39	+3.4
2,679,126	-		Psest_2505	0.39	+2.7
2,679,126	-		Psest_2505	0.39	+0.2
2,679,126	-		Psest_2505	0.39	+2.3
2,679,127	+		Psest_2505	0.39	+2.5
2,679,127	+		Psest_2505	0.39	+2.5
2,679,127	+		Psest_2505	0.39	-2.2
2,679,127	+		Psest_2505	0.39	+4.4
2,679,127	+		Psest_2505	0.39	+1.6
2,679,128	-		Psest_2505	0.39	+2.6
2,679,128	-		Psest_2505	0.39	+0.7
2,679,128	-		Psest_2505	0.39	+2.8
2,679,128	-		Psest_2505	0.39	+2.6
2,679,128	-		Psest_2505	0.39	+2.7
2,679,128	-		Psest_2505	0.39	+3.4
2,679,128	-		Psest_2505	0.39	+0.6
2,679,128	-		Psest_2505	0.39	+2.0
2,679,128	-		Psest_2505	0.39	+3.2
2,679,180	-		Psest_2505	0.43	+2.9
2,679,187	-		Psest_2505	0.43	+1.6
2,679,354	-		Psest_2505	0.55	+2.7
2,679,415	-		Psest_2505	0.59	+2.9
2,679,441	-		Psest_2505	0.61	+3.7
2,679,441	-		Psest_2505	0.61	-0.8
2,679,450	-		Psest_2505	0.62	+1.5