Experiment: With vitamins t1
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Psest_3196 and Psest_3197 are separated by 286 nucleotides Psest_3197 and Psest_3198 are separated by 189 nucleotides Psest_3198 and Psest_3199 are separated by 0 nucleotides
Psest_3196: Psest_3196 - Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes, at 3,367,824 to 3,368,981
_3196
Psest_3197: Psest_3197 - hypothetical protein, at 3,369,268 to 3,370,164
_3197
Psest_3198: Psest_3198 - Putative hemolysin, at 3,370,354 to 3,371,100
_3198
Psest_3199: Psest_3199 - 1-acyl-sn-glycerol-3-phosphate acyltransferase, at 3,371,101 to 3,371,874
_3199
Position (kb)
3369
3370
3371 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 3368.281 kb on + strand, within Psest_3196 at 3368.281 kb on + strand, within Psest_3196 at 3368.282 kb on - strand, within Psest_3196 at 3368.413 kb on - strand, within Psest_3196 at 3368.602 kb on + strand, within Psest_3196 at 3368.602 kb on + strand, within Psest_3196 at 3368.603 kb on - strand, within Psest_3196 at 3368.619 kb on + strand, within Psest_3196 at 3368.619 kb on + strand, within Psest_3196 at 3368.620 kb on - strand, within Psest_3196 at 3368.620 kb on - strand, within Psest_3196 at 3368.620 kb on - strand, within Psest_3196 at 3368.620 kb on - strand, within Psest_3196 at 3368.620 kb on - strand, within Psest_3196 at 3368.620 kb on - strand, within Psest_3196 at 3368.686 kb on + strand, within Psest_3196 at 3368.686 kb on + strand, within Psest_3196 at 3368.687 kb on - strand, within Psest_3196 at 3368.852 kb on - strand, within Psest_3196 at 3368.852 kb on - strand, within Psest_3196 at 3368.852 kb on - strand, within Psest_3196 at 3368.852 kb on - strand, within Psest_3196 at 3368.852 kb on - strand, within Psest_3196 at 3368.992 kb on + strand at 3368.993 kb on - strand at 3369.137 kb on + strand at 3369.218 kb on + strand at 3369.218 kb on + strand at 3369.219 kb on - strand at 3369.219 kb on - strand at 3369.219 kb on - strand at 3369.219 kb on - strand at 3369.220 kb on + strand at 3369.220 kb on + strand at 3369.220 kb on + strand at 3369.220 kb on + strand at 3369.220 kb on + strand at 3369.220 kb on + strand at 3369.220 kb on + strand at 3369.221 kb on - strand at 3369.523 kb on + strand, within Psest_3197 at 3369.524 kb on - strand, within Psest_3197 at 3369.595 kb on + strand, within Psest_3197 at 3369.614 kb on + strand, within Psest_3197 at 3369.615 kb on - strand, within Psest_3197 at 3369.615 kb on - strand, within Psest_3197 at 3369.615 kb on - strand, within Psest_3197 at 3369.635 kb on + strand, within Psest_3197 at 3369.936 kb on + strand, within Psest_3197 at 3369.995 kb on + strand, within Psest_3197 at 3370.044 kb on - strand, within Psest_3197 at 3370.088 kb on - strand at 3370.088 kb on - strand at 3370.088 kb on - strand at 3370.544 kb on + strand, within Psest_3198 at 3370.544 kb on + strand, within Psest_3198 at 3370.544 kb on + strand, within Psest_3198 at 3370.544 kb on + strand, within Psest_3198 at 3370.544 kb on + strand, within Psest_3198 at 3370.545 kb on - strand, within Psest_3198 at 3370.545 kb on - strand, within Psest_3198 at 3370.545 kb on - strand, within Psest_3198 at 3370.625 kb on - strand, within Psest_3198 at 3370.625 kb on - strand, within Psest_3198 at 3370.873 kb on - strand, within Psest_3198 at 3370.966 kb on + strand, within Psest_3198 at 3370.966 kb on + strand, within Psest_3198 at 3370.966 kb on + strand, within Psest_3198 at 3370.966 kb on + strand, within Psest_3198 at 3370.966 kb on + strand, within Psest_3198 at 3370.966 kb on + strand, within Psest_3198 at 3370.966 kb on + strand, within Psest_3198 at 3370.967 kb on - strand, within Psest_3198 at 3370.967 kb on - strand, within Psest_3198 at 3370.967 kb on - strand, within Psest_3198 at 3370.967 kb on - strand, within Psest_3198 at 3370.967 kb on - strand, within Psest_3198 at 3370.967 kb on - strand, within Psest_3198 at 3370.967 kb on - strand, within Psest_3198 at 3370.967 kb on - strand, within Psest_3198 at 3370.967 kb on - strand, within Psest_3198 at 3370.969 kb on - strand, within Psest_3198 at 3371.098 kb on + strand at 3371.098 kb on + strand at 3371.098 kb on + strand at 3371.098 kb on + strand at 3371.098 kb on + strand at 3371.098 kb on + strand at 3371.098 kb on + strand at 3371.162 kb on + strand at 3371.162 kb on + strand at 3371.163 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction With vitamins t1 remove 3,368,281 + Psest_3196 0.39 -0.4 3,368,281 + Psest_3196 0.39 -0.6 3,368,282 - Psest_3196 0.40 -0.7 3,368,413 - Psest_3196 0.51 -3.1 3,368,602 + Psest_3196 0.67 -1.9 3,368,602 + Psest_3196 0.67 +0.1 3,368,603 - Psest_3196 0.67 -1.9 3,368,619 + Psest_3196 0.69 +0.8 3,368,619 + Psest_3196 0.69 +2.0 3,368,620 - Psest_3196 0.69 -0.0 3,368,620 - Psest_3196 0.69 -0.6 3,368,620 - Psest_3196 0.69 -0.6 3,368,620 - Psest_3196 0.69 -3.6 3,368,620 - Psest_3196 0.69 +1.1 3,368,620 - Psest_3196 0.69 +1.4 3,368,686 + Psest_3196 0.74 +1.9 3,368,686 + Psest_3196 0.74 -1.1 3,368,687 - Psest_3196 0.75 -0.6 3,368,852 - Psest_3196 0.89 -1.3 3,368,852 - Psest_3196 0.89 -1.9 3,368,852 - Psest_3196 0.89 -0.5 3,368,852 - Psest_3196 0.89 -0.6 3,368,852 - Psest_3196 0.89 +0.4 3,368,992 + +1.0 3,368,993 - +1.4 3,369,137 + -2.6 3,369,218 + +1.3 3,369,218 + -0.2 3,369,219 - +0.8 3,369,219 - -0.4 3,369,219 - +0.3 3,369,219 - +1.6 3,369,220 + +0.3 3,369,220 + +1.3 3,369,220 + -0.2 3,369,220 + +0.3 3,369,220 + -2.4 3,369,220 + -0.2 3,369,220 + +0.8 3,369,221 - +1.0 3,369,523 + Psest_3197 0.28 -1.6 3,369,524 - Psest_3197 0.29 +0.4 3,369,595 + Psest_3197 0.36 -1.2 3,369,614 + Psest_3197 0.39 -0.8 3,369,615 - Psest_3197 0.39 -2.6 3,369,615 - Psest_3197 0.39 +0.4 3,369,615 - Psest_3197 0.39 -2.8 3,369,635 + Psest_3197 0.41 -0.5 3,369,936 + Psest_3197 0.74 -1.3 3,369,995 + Psest_3197 0.81 -0.6 3,370,044 - Psest_3197 0.87 -0.6 3,370,088 - +0.9 3,370,088 - -0.6 3,370,088 - -0.9 3,370,544 + Psest_3198 0.25 +1.8 3,370,544 + Psest_3198 0.25 +0.5 3,370,544 + Psest_3198 0.25 +0.3 3,370,544 + Psest_3198 0.25 -0.2 3,370,544 + Psest_3198 0.25 +3.0 3,370,545 - Psest_3198 0.26 -0.6 3,370,545 - Psest_3198 0.26 +2.4 3,370,545 - Psest_3198 0.26 -0.8 3,370,625 - Psest_3198 0.36 -0.3 3,370,625 - Psest_3198 0.36 -1.2 3,370,873 - Psest_3198 0.69 +0.1 3,370,966 + Psest_3198 0.82 +0.8 3,370,966 + Psest_3198 0.82 -2.1 3,370,966 + Psest_3198 0.82 -1.2 3,370,966 + Psest_3198 0.82 +1.1 3,370,966 + Psest_3198 0.82 +0.4 3,370,966 + Psest_3198 0.82 +0.4 3,370,966 + Psest_3198 0.82 +1.5 3,370,967 - Psest_3198 0.82 -0.9 3,370,967 - Psest_3198 0.82 +0.4 3,370,967 - Psest_3198 0.82 +0.8 3,370,967 - Psest_3198 0.82 -1.2 3,370,967 - Psest_3198 0.82 +2.5 3,370,967 - Psest_3198 0.82 -1.4 3,370,967 - Psest_3198 0.82 -1.6 3,370,967 - Psest_3198 0.82 +3.4 3,370,967 - Psest_3198 0.82 +0.0 3,370,969 - Psest_3198 0.82 -0.9 3,371,098 + -1.0 3,371,098 + +0.9 3,371,098 + +0.6 3,371,098 + +0.1 3,371,098 + +0.4 3,371,098 + -0.2 3,371,098 + -0.9 3,371,162 + -1.9 3,371,162 + -1.6 3,371,163 - -0.2
Or see this region's nucleotide sequence