Strain Fitness in Pseudomonas stutzeri RCH2 around Psest_2965

Experiment: With vitamins t1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	With vitamins t1
3,160,145	-				-0.3
3,160,145	-				-1.2
3,160,206	+				+4.8
3,160,207	-				+1.3
3,160,207	-				+0.9
3,160,207	-				-0.7
3,160,207	-				+0.3
3,160,302	+		Psest_2964	0.21	+1.3
3,160,303	-		Psest_2964	0.22	-2.0
3,160,565	+		Psest_2964	0.57	+5.0
3,160,588	+		Psest_2964	0.60	+7.7
3,160,589	-		Psest_2964	0.60	+6.4
3,160,589	-		Psest_2964	0.60	+2.7
3,160,589	-		Psest_2964	0.60	+3.4
3,160,640	+		Psest_2964	0.67	+3.5
3,160,717	+		Psest_2964	0.77	+4.2
3,160,717	+		Psest_2964	0.77	+3.7
3,160,717	+		Psest_2964	0.77	+3.9
3,160,718	-		Psest_2964	0.78	+0.8
3,160,798	-		Psest_2964	0.88	+3.1
3,160,798	-		Psest_2964	0.88	+1.2
3,160,798	-		Psest_2964	0.88	+3.8
3,160,867	+				+5.9
3,160,867	+				+4.5
3,160,867	+				+3.7
3,160,867	+				+4.9
3,160,867	+				+0.8
3,160,868	-				+2.1
3,160,868	-				+1.5
3,160,868	-				+3.9
3,160,868	-				+3.4
3,160,868	-				+5.1
3,160,868	-				+4.9
3,161,000	-				-0.7
3,161,077	+				-0.2
3,161,080	+				-1.4
3,161,091	+				+3.8
3,161,091	+				+4.5
3,161,091	+				+4.0
3,161,092	-				+3.8
3,161,092	-				+3.5
3,161,092	-				+3.4
3,161,092	-				+2.8
3,161,146	+				+2.9
3,161,146	+				+2.2
3,161,151	-				+4.5
3,161,151	-				+3.4
3,161,440	+		Psest_2965	0.23	+6.0
3,161,440	+		Psest_2965	0.23	+2.1
3,161,440	+		Psest_2965	0.23	+6.4
3,161,441	-		Psest_2965	0.23	+4.7
3,161,441	-		Psest_2965	0.23	+0.8
3,161,483	-		Psest_2965	0.25	+2.7
3,161,628	-		Psest_2965	0.35	+4.4
3,161,673	-		Psest_2965	0.37	-1.7
3,161,722	+		Psest_2965	0.41	+5.0
3,161,722	+		Psest_2965	0.41	+5.0
3,161,722	+		Psest_2965	0.41	+4.0
3,161,723	-		Psest_2965	0.41	+4.7
3,161,723	-		Psest_2965	0.41	+4.6
3,161,723	-		Psest_2965	0.41	+5.1
3,161,776	-		Psest_2965	0.44	+4.7
3,161,776	-		Psest_2965	0.44	+0.9
3,161,792	+		Psest_2965	0.45	+1.3
3,161,792	+		Psest_2965	0.45	+2.1
3,161,792	+		Psest_2965	0.45	+4.1
3,161,792	+		Psest_2965	0.45	+3.7
3,161,792	+		Psest_2965	0.45	+2.5
3,161,792	+		Psest_2965	0.45	+3.0
3,161,793	-		Psest_2965	0.45	+3.9
3,161,793	-		Psest_2965	0.45	+3.9
3,161,793	-		Psest_2965	0.45	+1.5
3,161,793	-		Psest_2965	0.45	+2.9
3,161,793	-		Psest_2965	0.45	+4.1
3,161,793	-		Psest_2965	0.45	+5.0
3,161,793	-		Psest_2965	0.45	+3.8
3,161,815	+		Psest_2965	0.46	+2.3
3,161,815	+		Psest_2965	0.46	+5.7
3,161,815	+		Psest_2965	0.46	+0.6
3,161,816	-		Psest_2965	0.46	-0.7
3,161,837	+		Psest_2965	0.48	+4.5
3,161,838	-		Psest_2965	0.48	+4.6
3,161,838	-		Psest_2965	0.48	+4.2
3,161,851	+		Psest_2965	0.49	+3.7
3,161,851	+		Psest_2965	0.49	+4.2
3,161,851	+		Psest_2965	0.49	+5.1
3,161,851	+		Psest_2965	0.49	+3.6
3,161,851	+		Psest_2965	0.49	+1.5
3,161,851	+		Psest_2965	0.49	+4.3
3,161,852	-		Psest_2965	0.49	+4.5
3,161,852	-		Psest_2965	0.49	+3.9
3,161,852	-		Psest_2965	0.49	+4.9
3,161,852	-		Psest_2965	0.49	+5.7
3,161,852	-		Psest_2965	0.49	+4.1
3,161,852	-		Psest_2965	0.49	+4.4
3,161,852	-		Psest_2965	0.49	+3.5
3,161,852	-		Psest_2965	0.49	+5.0
3,161,879	-		Psest_2965	0.50	+3.9
3,161,879	-		Psest_2965	0.50	+2.1
3,161,901	-		Psest_2965	0.52	+5.0
3,161,988	-		Psest_2965	0.57	+4.2
3,162,067	+		Psest_2965	0.62	+1.8
3,162,086	+		Psest_2965	0.63	+2.1
3,162,087	-		Psest_2965	0.64	+6.1
3,162,087	-		Psest_2965	0.64	+3.0
3,162,087	-		Psest_2965	0.64	+3.6
3,162,089	+		Psest_2965	0.64	+3.1
3,162,089	+		Psest_2965	0.64	+3.6
3,162,090	-		Psest_2965	0.64	+2.0
3,162,101	+		Psest_2965	0.64	+6.7
3,162,102	-		Psest_2965	0.64	+3.0
3,162,103	+		Psest_2965	0.65	+3.1
3,162,103	+		Psest_2965	0.65	+2.4
3,162,104	-		Psest_2965	0.65	+5.7
3,162,104	-		Psest_2965	0.65	+3.7
3,162,104	-		Psest_2965	0.65	+4.1
3,162,115	+		Psest_2965	0.65	+4.8
3,162,116	-		Psest_2965	0.65	+4.4
3,162,227	+		Psest_2965	0.72	+4.1
3,162,228	-		Psest_2965	0.72	+3.7
3,162,228	-		Psest_2965	0.72	+3.1
3,162,228	-		Psest_2965	0.72	+4.9
3,162,231	-		Psest_2965	0.73	+4.8
3,162,231	-		Psest_2965	0.73	+5.5
3,162,231	-		Psest_2965	0.73	+3.8
3,162,231	-		Psest_2965	0.73	+6.0
3,162,255	+		Psest_2965	0.74	+4.6
3,162,305	+		Psest_2965	0.77	+3.1
3,162,305	+		Psest_2965	0.77	+3.3
3,162,306	-		Psest_2965	0.77	+3.8
3,162,306	-		Psest_2965	0.77	+4.6
3,162,306	-		Psest_2965	0.77	+3.8
3,162,306	-		Psest_2965	0.77	+2.3
3,162,306	-		Psest_2965	0.77	+4.1
3,162,353	-		Psest_2965	0.80	+3.6
3,162,367	+		Psest_2965	0.81	+3.1
3,162,367	+		Psest_2965	0.81	+1.2
3,162,367	+		Psest_2965	0.81	+3.5
3,162,368	-		Psest_2965	0.81	+3.1
3,162,368	-		Psest_2965	0.81	+4.1
3,162,368	-		Psest_2965	0.81	+1.4
3,162,373	-		Psest_2965	0.82	+2.7
3,162,442	+		Psest_2965	0.86	+5.0
3,162,442	+		Psest_2965	0.86	+3.0
3,162,442	+		Psest_2965	0.86	+6.0
3,162,443	-		Psest_2965	0.86	+2.3
3,162,449	+		Psest_2965	0.86	+3.3
3,162,449	+		Psest_2965	0.86	+1.4
3,162,449	+		Psest_2965	0.86	+2.2
3,162,476	+		Psest_2965	0.88	+6.1
3,162,476	+		Psest_2965	0.88	+4.4
3,162,817	+		Psest_2966	0.18	+3.6
3,162,817	+		Psest_2966	0.18	+3.2
3,162,817	+		Psest_2966	0.18	+3.1
3,162,817	+		Psest_2966	0.18	+3.1
3,162,817	+		Psest_2966	0.18	+3.0
3,162,818	-		Psest_2966	0.18	+0.7
3,162,818	-		Psest_2966	0.18	+1.3
3,162,818	-		Psest_2966	0.18	+0.3
3,162,818	-		Psest_2966	0.18	+1.4
3,162,818	-		Psest_2966	0.18	-0.4
3,162,841	+		Psest_2966	0.21	+2.4
3,162,841	+		Psest_2966	0.21	+3.2
3,162,842	-		Psest_2966	0.21	+1.4
3,162,842	-		Psest_2966	0.21	-0.7
3,162,845	+		Psest_2966	0.22	+4.2
3,162,982	+		Psest_2966	0.42	+3.5
3,162,982	+		Psest_2966	0.42	+4.8
3,162,983	-		Psest_2966	0.42	+4.0
3,162,983	-		Psest_2966	0.42	+3.5
3,162,983	-		Psest_2966	0.42	+2.8
3,162,983	-		Psest_2966	0.42	+7.3
3,162,983	-		Psest_2966	0.42	+1.6
3,163,185	-		Psest_2966	0.71	+5.3
3,163,185	-		Psest_2966	0.71	+5.2
3,163,233	+		Psest_2966	0.79	+1.9
3,163,331	-				+3.8
3,163,379	+				+5.1
3,163,379	+				+1.3
3,163,379	+				+5.0
3,163,379	+				+3.2
3,163,380	-				+5.1
3,163,380	-				+2.5
3,163,380	-				+2.8
3,163,397	+				+4.1
3,163,397	+				+4.7
3,163,397	+				+4.5
3,163,398	-				+0.1
3,163,398	-				-1.0
3,163,398	-				-1.7
3,163,398	-				+0.8
3,163,526	+		Psest_2967	0.29	-3.5
3,163,529	+		Psest_2967	0.29	-1.5
3,163,529	+		Psest_2967	0.29	-4.2
3,163,613	-		Psest_2967	0.48	+0.7
3,163,613	-		Psest_2967	0.48	-3.0