Strain Fitness in Pseudomonas fluorescens FW300-N2E2 around Pf6N2E2_5789

Experiment: LB

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	LB
6,606,339	+		Pf6N2E2_5787	0.80	-1.2
6,606,340	-		Pf6N2E2_5787	0.80	+0.9
6,606,399	+		Pf6N2E2_5787	0.87	-0.1
6,606,399	+		Pf6N2E2_5787	0.87	+0.1
6,606,400	-		Pf6N2E2_5787	0.88	+0.3
6,606,400	-		Pf6N2E2_5787	0.88	+0.4
6,606,400	-		Pf6N2E2_5787	0.88	+1.1
6,606,400	-		Pf6N2E2_5787	0.88	-0.4
6,606,447	+				-0.2
6,606,448	-				-0.0
6,606,465	+				-0.6
6,606,465	+				+0.2
6,606,466	-				-0.6
6,606,466	-				+0.4
6,606,502	+				-0.6
6,606,502	+				-1.1
6,606,502	+				+1.6
6,606,502	+				-0.1
6,606,502	+				+0.6
6,606,502	+				+1.4
6,606,502	+				-0.0
6,606,502	+				+0.2
6,606,503	-				-0.3
6,606,503	-				+0.9
6,606,503	-				-0.2
6,606,503	-				+0.7
6,606,503	-				+0.4
6,606,503	-				-0.0
6,606,667	+		Pf6N2E2_5788	0.21	-0.0
6,606,667	+		Pf6N2E2_5788	0.21	+0.7
6,606,668	-		Pf6N2E2_5788	0.22	-0.1
6,606,668	-		Pf6N2E2_5788	0.22	+0.8
6,606,680	-		Pf6N2E2_5788	0.23	-1.1
6,606,680	-		Pf6N2E2_5788	0.23	+0.8
6,606,868	+		Pf6N2E2_5788	0.45	-1.3
6,606,868	+		Pf6N2E2_5788	0.45	+1.6
6,606,868	+		Pf6N2E2_5788	0.45	-0.6
6,606,868	+		Pf6N2E2_5788	0.45	+0.1
6,606,868	+		Pf6N2E2_5788	0.45	-0.4
6,606,869	-		Pf6N2E2_5788	0.45	-0.4
6,606,869	-		Pf6N2E2_5788	0.45	-0.9
6,606,869	-		Pf6N2E2_5788	0.45	-0.2
6,606,874	+		Pf6N2E2_5788	0.46	+0.4
6,607,075	+		Pf6N2E2_5788	0.70	+1.9
6,607,075	+		Pf6N2E2_5788	0.70	+0.3
6,607,076	-		Pf6N2E2_5788	0.70	-0.1
6,607,076	-		Pf6N2E2_5788	0.70	+0.9
6,607,076	-		Pf6N2E2_5788	0.70	+0.6
6,607,076	-		Pf6N2E2_5788	0.70	+1.9
6,607,156	+		Pf6N2E2_5788	0.79	+1.9
6,607,156	+		Pf6N2E2_5788	0.79	-0.1
6,607,337	+				-0.1
6,607,338	-				+1.3
6,607,350	+				-0.3
6,607,351	-				+0.1
6,607,569	+		Pf6N2E2_5789	0.30	-0.3
6,607,569	+		Pf6N2E2_5789	0.30	-0.9
6,607,570	-		Pf6N2E2_5789	0.30	-1.1
6,607,689	+		Pf6N2E2_5789	0.45	+0.7
6,607,689	+		Pf6N2E2_5789	0.45	+1.0
6,607,690	-		Pf6N2E2_5789	0.45	+0.8
6,607,690	-		Pf6N2E2_5789	0.45	+0.9
6,607,752	+		Pf6N2E2_5789	0.53	-0.1
6,607,830	+		Pf6N2E2_5789	0.62	+2.3
6,607,830	+		Pf6N2E2_5789	0.62	+0.4
6,607,830	+		Pf6N2E2_5789	0.62	-1.8
6,607,830	+		Pf6N2E2_5789	0.62	+0.3
6,607,831	-		Pf6N2E2_5789	0.62	+0.9
6,607,851	+		Pf6N2E2_5789	0.65	+0.9
6,607,852	-		Pf6N2E2_5789	0.65	-0.1
6,608,025	+		Pf6N2E2_5789	0.86	+0.4
6,608,025	+		Pf6N2E2_5789	0.86	-0.5
6,608,052	+		Pf6N2E2_5789	0.90	-0.1
6,608,052	+		Pf6N2E2_5789	0.90	-1.0
6,608,052	+		Pf6N2E2_5789	0.90	+0.9
6,608,053	-		Pf6N2E2_5789	0.90	+0.7
6,608,053	-		Pf6N2E2_5789	0.90	+0.1
6,608,053	-		Pf6N2E2_5789	0.90	+0.7
6,608,264	+				+1.2
6,608,264	+				-0.5
6,608,265	-				+0.4
6,608,356	+				-2.9
6,608,357	-				-0.9
6,608,357	-				+0.6
6,608,357	-				-0.2
6,608,473	+		Pf6N2E2_5790	0.20	+1.0
6,608,473	+		Pf6N2E2_5790	0.20	-0.2
6,608,473	+		Pf6N2E2_5790	0.20	-0.3
6,608,474	-		Pf6N2E2_5790	0.20	-0.8
6,608,474	-		Pf6N2E2_5790	0.20	-0.3
6,608,474	-		Pf6N2E2_5790	0.20	-0.7
6,608,474	-		Pf6N2E2_5790	0.20	+0.4
6,608,474	-		Pf6N2E2_5790	0.20	-0.4
6,608,512	+		Pf6N2E2_5790	0.24	+1.9
6,608,512	+		Pf6N2E2_5790	0.24	+0.2
6,608,513	-		Pf6N2E2_5790	0.24	+0.4
6,608,575	+		Pf6N2E2_5790	0.30	+0.2
6,608,575	+		Pf6N2E2_5790	0.30	+1.0
6,608,575	+		Pf6N2E2_5790	0.30	-0.6
6,608,575	+		Pf6N2E2_5790	0.30	-0.1
6,608,575	+		Pf6N2E2_5790	0.30	-0.3
6,608,575	+		Pf6N2E2_5790	0.30	+1.9
6,608,575	+		Pf6N2E2_5790	0.30	+1.2
6,608,576	-		Pf6N2E2_5790	0.30	-0.5
6,608,576	-		Pf6N2E2_5790	0.30	+0.7
6,608,576	-		Pf6N2E2_5790	0.30	-0.3
6,608,576	-		Pf6N2E2_5790	0.30	+1.9
6,608,576	-		Pf6N2E2_5790	0.30	+0.1
6,608,576	-		Pf6N2E2_5790	0.30	-0.1
6,608,605	+		Pf6N2E2_5790	0.33	-2.1
6,608,605	+		Pf6N2E2_5790	0.33	+0.2
6,608,605	+		Pf6N2E2_5790	0.33	+1.5
6,608,605	+		Pf6N2E2_5790	0.33	+1.9
6,608,830	+		Pf6N2E2_5790	0.54	-0.2
6,608,831	-		Pf6N2E2_5790	0.54	-2.5
6,608,831	-		Pf6N2E2_5790	0.54	-0.5
6,608,920	+		Pf6N2E2_5790	0.62	+0.7
6,608,921	-		Pf6N2E2_5790	0.62	+0.9
6,608,964	+		Pf6N2E2_5790	0.66	-0.0
6,608,964	+		Pf6N2E2_5790	0.66	-0.2
6,608,964	+		Pf6N2E2_5790	0.66	-0.2
6,608,965	-		Pf6N2E2_5790	0.66	+1.4
6,608,965	-		Pf6N2E2_5790	0.66	-0.2
6,608,989	+		Pf6N2E2_5790	0.69	-0.9
6,608,989	+		Pf6N2E2_5790	0.69	+0.1
6,608,990	-		Pf6N2E2_5790	0.69	+2.5