Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT2638

Experiment: Post-colonization (Day 3) - Cage7;Mouse1

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Post-colonization (Day 3) - Cage7;Mouse1
3,290,034	+		BT2635	0.26	-0.9
3,290,034	+		BT2635	0.26	-0.6
3,290,034	+		BT2635	0.26	-0.4
3,290,035	-		BT2635	0.26	-1.5
3,290,044	+		BT2635	0.30	-1.1
3,290,048	+		BT2635	0.31	-0.7
3,290,067	+		BT2635	0.38	-0.7
3,290,067	+		BT2635	0.38	-0.9
3,290,115	+		BT2635	0.56	-0.6
3,290,115	+		BT2635	0.56	-1.5
3,290,190	+		BT2635	0.84	-1.2
3,290,191	-		BT2635	0.84	+0.5
3,290,195	-		BT2635	0.86	-2.2
3,290,195	-		BT2635	0.86	-2.0
3,290,216	+				-1.5
3,290,217	-				-0.9
3,290,312	+				+0.3
3,290,313	-				-1.9
3,290,343	-				-1.6
3,290,369	+				+0.0
3,290,383	+		BT2636	0.12	-1.3
3,290,385	+		BT2636	0.13	-1.3
3,290,409	-		BT2636	0.20	+0.5
3,290,410	+		BT2636	0.20	+0.1
3,290,416	+		BT2636	0.22	-0.4
3,290,432	+		BT2636	0.26	-1.0
3,290,447	+		BT2636	0.30	-0.4
3,290,447	+		BT2636	0.30	-2.2
3,290,470	+		BT2636	0.37	+0.3
3,290,485	-		BT2636	0.41	-0.1
3,290,498	+		BT2636	0.45	+0.1
3,290,499	-		BT2636	0.45	+0.3
3,290,509	+		BT2636	0.48	-0.9
3,290,530	+		BT2636	0.54	-1.4
3,290,544	+		BT2636	0.57	-1.1
3,290,545	-		BT2636	0.58	-0.1
3,290,589	+		BT2636	0.70	-0.9
3,290,591	+		BT2636	0.71	-0.1
3,290,591	+		BT2636	0.71	-1.1
3,290,593	+		BT2636	0.71	+1.7
3,290,593	+		BT2636	0.71	-0.9
3,290,593	+		BT2636	0.71	+0.9
3,290,594	-		BT2636	0.71	-1.1
3,290,595	+		BT2636	0.72	+0.4
3,290,595	+		BT2636	0.72	-1.0
3,290,595	+		BT2636	0.72	-0.6
3,290,627	-		BT2636	0.81	+0.9
3,290,647	-		BT2636	0.86	-1.9
3,290,666	+				-0.6
3,290,681	+				-1.0
3,290,700	+				-0.8
3,290,701	-				-0.3
3,290,701	-				+0.2
3,290,702	+				-0.1
3,290,702	+				+0.0
3,290,702	+				+0.1
3,290,703	-				-1.5
3,290,712	+				-1.3
3,290,713	-				-0.1
3,290,713	-				-1.7
3,290,715	+				-0.6
3,290,749	+		BT2637	0.19	+0.6
3,290,749	+		BT2637	0.19	-0.4
3,290,750	-		BT2637	0.19	+0.7
3,290,780	-		BT2637	0.34	-0.2
3,290,846	-		BT2637	0.67	-1.6
3,290,846	-		BT2637	0.67	-0.6
3,290,870	-		BT2637	0.79	+0.3
3,290,884	-		BT2637	0.86	-1.7
3,290,892	-				-1.1
3,290,892	-				-0.9
3,290,892	-				-2.6
3,290,911	+				+0.7
3,290,915	-				+1.9
3,290,917	-				-0.6
3,290,955	+				-1.2
3,290,993	+				+0.1
3,290,994	-				+0.2
3,290,994	-				-0.1
3,290,994	-				-0.5
3,291,007	+				-0.1
3,291,018	+				-1.1
3,291,031	-				-0.2
3,291,045	+				-1.0
3,291,046	-				-1.0
3,291,050	-				+0.5
3,291,050	-				+0.9
3,291,054	+				-0.2
3,291,085	+		BT2638	0.20	+0.2
3,291,094	+		BT2638	0.23	+0.9
3,291,094	+		BT2638	0.23	-0.6
3,291,095	-		BT2638	0.23	+0.0
3,291,095	-		BT2638	0.23	-2.2
3,291,100	+		BT2638	0.25	-0.2
3,291,100	+		BT2638	0.25	-0.1
3,291,100	+		BT2638	0.25	+2.5
3,291,101	-		BT2638	0.26	-1.1
3,291,101	-		BT2638	0.26	-0.7
3,291,114	+		BT2638	0.30	-1.4
3,291,137	+		BT2638	0.39	-1.4
3,291,137	+		BT2638	0.39	+0.5
3,291,137	+		BT2638	0.39	+1.5
3,291,138	-		BT2638	0.39	-1.4
3,291,138	-		BT2638	0.39	+0.7
3,291,139	+		BT2638	0.40	+0.5
3,291,140	-		BT2638	0.40	-0.4
3,291,140	-				+0.9
3,291,140	-		BT2638	0.40	+0.4
3,291,195	+		BT2638	0.60	+1.2
3,291,198	-		BT2638	0.61	-2.1
3,291,210	+		BT2638	0.66	-0.4
3,291,210	+		BT2638	0.66	-0.6
3,291,211	-		BT2638	0.66	+1.0
3,291,228	+		BT2638	0.72	+0.6
3,291,229	-		BT2638	0.73	+0.6
3,291,230	+		BT2638	0.73	+0.7
3,291,230	+		BT2638	0.73	-2.2
3,291,307	+				+0.1
3,291,307	+				-1.3
3,291,330	+				-0.3
3,291,331	-				-0.6
3,291,333	-				-1.1
3,291,382	+				-1.9
3,291,405	+				-1.4
3,291,405	+				+0.9
3,291,406	-				-0.1
3,291,411	+				+0.8
3,291,438	-		BT2639	0.11	+1.4
3,291,484	+		BT2639	0.15	-1.6
3,291,485	-		BT2639	0.16	-0.6
3,291,498	+		BT2639	0.17	-0.3
3,291,499	-		BT2639	0.17	-0.7
3,291,514	-		BT2639	0.19	+0.2
3,291,522	-		BT2639	0.19	-2.5
3,291,540	+		BT2639	0.21	-0.1
3,291,547	-		BT2639	0.22	+0.3
3,291,557	+		BT2639	0.23	-1.1
3,291,559	+		BT2639	0.23	+0.2
3,291,559	+		BT2639	0.23	-0.1
3,291,560	-		BT2639	0.23	-1.5
3,291,560	-		BT2639	0.23	-0.3
3,291,560	-		BT2639	0.23	-1.7
3,291,564	-		BT2639	0.24	-0.2
3,291,609	+		BT2639	0.29	-0.4
3,291,644	+		BT2639	0.32	+0.0
3,291,645	-		BT2639	0.32	-0.1
3,291,671	-		BT2639	0.35	-1.2
3,291,701	+		BT2639	0.38	+0.3
3,291,730	+		BT2639	0.41	-1.4
3,291,730	+		BT2639	0.41	-0.8
3,291,731	-		BT2639	0.41	-1.4
3,291,731	-		BT2639	0.41	-1.2
3,291,732	+		BT2639	0.41	+2.3
3,291,733	-		BT2639	0.42	+0.9
3,291,819	+		BT2639	0.51	-1.6
3,291,862	-		BT2639	0.55	-0.6
3,291,862	-		BT2639	0.55	-2.5
3,291,889	-		BT2639	0.58	-0.5
3,291,963	+		BT2639	0.66	+0.9
3,291,963	+		BT2639	0.66	-0.3
3,291,964	-		BT2639	0.66	+1.3
3,291,964	-		BT2639	0.66	+0.5
3,291,970	+		BT2639	0.66	-0.4
3,291,970	+		BT2639	0.66	-1.2
3,291,990	+		BT2639	0.68	-1.1
3,292,009	-		BT2639	0.70	+0.2
3,292,026	-		BT2639	0.72	-0.9
3,292,026	-		BT2639	0.72	+2.1
3,292,038	-		BT2639	0.73	+0.4
3,292,038	-		BT2639	0.73	-0.9
3,292,110	+		BT2639	0.81	-0.9
3,292,112	+		BT2639	0.81	+0.5
3,292,113	-		BT2639	0.81	-1.1
3,292,118	-		BT2639	0.82	+2.1
3,292,137	+		BT2639	0.84	+0.1
3,292,138	-		BT2639	0.84	+1.4
3,292,146	+		BT2639	0.85	-1.1
3,292,167	-		BT2639	0.87	-1.6
3,292,177	-		BT2639	0.88	+0.9
3,292,212	-				+0.2
3,292,212	-				-0.9
3,292,233	+				-1.9
3,292,255	+				-0.4
3,292,256	-				-0.8