Strain Fitness in Rhodanobacter denitrificans MT42 around LRK55_RS10785

Experiment: no stress control

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	no stress control
2,375,622	+				-2.0
2,375,622	+				-2.5
2,375,622	+				-1.6
2,375,623	-				-2.2
2,375,623	-				-1.3
2,375,623	-				+0.2
2,375,623	-				-0.9
2,375,623	-				+0.4
2,375,623	-				-0.6
2,375,643	-				-1.8
2,375,643	-				-0.1
2,375,746	+				-0.0
2,375,748	+				-0.3
2,375,748	+				+0.7
2,375,748	+				-0.1
2,375,749	-				+1.0
2,375,749	-				+2.0
2,375,749	-				-0.9
2,375,749	-				-0.5
2,375,749	-				-1.6
2,375,756	+				+0.1
2,375,757	-				+1.2
2,375,788	+				+1.0
2,375,788	+				-1.4
2,375,788	+				-1.3
2,375,789	-				+0.7
2,375,789	-				-1.3
2,375,789	-				-1.7
2,375,789	-				-2.1
2,375,798	+				-1.3
2,375,798	+				-0.4
2,375,882	+				-1.1
2,375,882	+				+0.8
2,375,882	+				+0.5
2,375,883	-				+0.6
2,376,040	+				+1.4
2,376,040	+				-1.0
2,376,041	-				+0.6
2,376,041	-				-3.1
2,376,052	+				-0.5
2,376,052	+				+0.6
2,376,053	-				-2.9
2,376,077	+				-1.2
2,376,077	+				-0.6
2,376,077	+				+0.1
2,376,077	+				-2.2
2,376,077	+				-1.4
2,376,077	+				+1.5
2,376,077	+				+2.3
2,376,077	+				-0.5
2,376,077	+				-0.4
2,376,077	+				-0.9
2,376,077	+				-1.6
2,376,077	+				-0.3
2,376,077	+				-0.6
2,376,077	+				-0.0
2,376,078	-				-0.2
2,376,078	-				+0.7
2,376,078	-				-0.3
2,376,078	-				-1.0
2,376,078	-				-0.3
2,376,078	-				-0.4
2,376,078	-				-0.6
2,376,078	-				-2.9
2,376,078	-				-0.1
2,376,078	-				-0.7
2,376,078	-				+0.1
2,376,078	-				+0.2
2,376,131	+				-0.6
2,376,131	+				-0.4
2,376,131	+				+0.4
2,376,132	-				+1.9
2,376,132	-				-0.0
2,376,132	-				-0.0
2,376,158	+		LRK55_RS10785	0.12	-0.8
2,376,158	+		LRK55_RS10785	0.12	-0.8
2,376,158	+		LRK55_RS10785	0.12	+0.4
2,376,158	+		LRK55_RS10785	0.12	+0.1
2,376,159	-		LRK55_RS10785	0.12	-1.2
2,376,159	-		LRK55_RS10785	0.12	-0.0
2,376,159	-		LRK55_RS10785	0.12	-0.3
2,376,326	+		LRK55_RS10785	0.26	-0.9
2,376,326	+		LRK55_RS10785	0.26	-0.0
2,376,326	+		LRK55_RS10785	0.26	+2.3
2,376,326	+		LRK55_RS10785	0.26	+0.6
2,376,326	+		LRK55_RS10785	0.26	+1.4
2,376,327	-		LRK55_RS10785	0.26	-1.6
2,376,327	-		LRK55_RS10785	0.26	-0.3
2,376,327	-		LRK55_RS10785	0.26	+0.8
2,376,327	-		LRK55_RS10785	0.26	-0.2
2,376,327	-		LRK55_RS10785	0.26	+0.5
2,376,327	-		LRK55_RS10785	0.26	+0.3
2,376,327	-		LRK55_RS10785	0.26	+0.1
2,376,327	-		LRK55_RS10785	0.26	-1.4
2,376,327	-		LRK55_RS10785	0.26	-0.0
2,376,327	-		LRK55_RS10785	0.26	+0.4
2,376,343	+		LRK55_RS10785	0.27	+0.1
2,376,343	+		LRK55_RS10785	0.27	-0.0
2,376,343	+		LRK55_RS10785	0.27	-0.1
2,376,343	+		LRK55_RS10785	0.27	+0.4
2,376,343	+		LRK55_RS10785	0.27	-0.6
2,376,343	+		LRK55_RS10785	0.27	+0.5
2,376,343	+		LRK55_RS10785	0.27	+0.7
2,376,344	-		LRK55_RS10785	0.27	+0.9
2,376,344	-		LRK55_RS10785	0.27	-1.4
2,376,344	-		LRK55_RS10785	0.27	+0.3
2,376,344	-		LRK55_RS10785	0.27	+0.6
2,376,344	-		LRK55_RS10785	0.27	-2.7
2,376,344	-		LRK55_RS10785	0.27	+0.8
2,376,344	-		LRK55_RS10785	0.27	+0.4
2,376,347	+		LRK55_RS10785	0.27	+0.5
2,376,347	+		LRK55_RS10785	0.27	-3.9
2,376,347	+		LRK55_RS10785	0.27	-0.3
2,376,347	+		LRK55_RS10785	0.27	-0.0
2,376,347	+		LRK55_RS10785	0.27	-0.4
2,376,347	+		LRK55_RS10785	0.27	+0.5
2,376,347	+		LRK55_RS10785	0.27	-0.5
2,376,348	-		LRK55_RS10785	0.27	+0.5
2,376,348	-		LRK55_RS10785	0.27	+0.6
2,376,348	-		LRK55_RS10785	0.27	-0.4
2,376,348	-		LRK55_RS10785	0.27	+0.8
2,376,348	-		LRK55_RS10785	0.27	+0.7
2,376,348	-		LRK55_RS10785	0.27	+0.1
2,376,348	-		LRK55_RS10785	0.27	-0.5
2,376,348	-		LRK55_RS10785	0.27	+0.8
2,376,348	-		LRK55_RS10785	0.27	+0.4
2,376,348	-		LRK55_RS10785	0.27	+1.1
2,376,925	+		LRK55_RS10785	0.75	+0.4
2,376,925	+		LRK55_RS10785	0.75	-0.2
2,376,926	-		LRK55_RS10785	0.75	+0.5
2,376,926	-		LRK55_RS10785	0.75	-0.2
2,376,977	+		LRK55_RS10785	0.80	+0.4
2,376,977	+		LRK55_RS10785	0.80	-1.8
2,376,977	+		LRK55_RS10785	0.80	-0.4
2,376,977	+		LRK55_RS10785	0.80	-0.3
2,376,977	+		LRK55_RS10785	0.80	+0.8
2,376,977	+		LRK55_RS10785	0.80	+0.2
2,376,977	+		LRK55_RS10785	0.80	+1.1
2,376,977	+		LRK55_RS10785	0.80	-0.3
2,376,977	+		LRK55_RS10785	0.80	-0.1
2,376,977	+		LRK55_RS10785	0.80	+0.4
2,376,978	-		LRK55_RS10785	0.80	+2.0
2,376,978	-		LRK55_RS10785	0.80	+2.6
2,376,978	-		LRK55_RS10785	0.80	+0.3
2,376,978	-		LRK55_RS10785	0.80	-1.3
2,377,001	+		LRK55_RS10785	0.82	+2.4
2,377,002	-		LRK55_RS10785	0.82	-0.2
2,377,002	-		LRK55_RS10785	0.82	+1.4
2,377,002	-		LRK55_RS10785	0.82	+0.4
2,377,202	+				+0.8
2,377,202	+				+0.4
2,377,202	+				+0.9
2,377,202	+				-0.1
2,377,203	-				+0.6
2,377,203	-				-0.6
2,377,203	-				-0.0
2,377,203	-				-1.0
2,377,203	-				+0.1
2,377,296	+				+1.4
2,377,296	+				-0.1
2,377,296	+				+0.1
2,377,296	+				-1.0
2,377,296	+				+0.3
2,377,297	-				+0.0
2,377,297	-				-0.5
2,377,297	-				+0.6
2,377,297	-				-0.0
2,377,297	-				-0.7
2,377,297	-				-0.1
2,377,297	-				+1.1
2,377,297	-				+1.0
2,377,775	+		LRK55_RS10790	0.32	+1.3
2,377,775	+		LRK55_RS10790	0.32	+0.3
2,377,775	+		LRK55_RS10790	0.32	+1.4
2,377,775	+		LRK55_RS10790	0.32	-0.3
2,377,775	+		LRK55_RS10790	0.32	+1.5
2,377,775	+		LRK55_RS10790	0.32	-1.5
2,377,775	+		LRK55_RS10790	0.32	-0.8
2,377,775	+		LRK55_RS10790	0.32	+0.1
2,377,775	+		LRK55_RS10790	0.32	-0.3
2,377,775	+		LRK55_RS10790	0.32	+0.5
2,377,776	-		LRK55_RS10790	0.32	+0.4
2,377,776	-		LRK55_RS10790	0.32	-0.0
2,377,829	+		LRK55_RS10790	0.36	-0.6
2,377,829	+		LRK55_RS10790	0.36	+1.0
2,377,829	+		LRK55_RS10790	0.36	+3.8
2,377,829	+		LRK55_RS10790	0.36	+0.2
2,377,829	+		LRK55_RS10790	0.36	-0.3
2,377,829	+		LRK55_RS10790	0.36	+2.6
2,377,829	+		LRK55_RS10790	0.36	-2.0
2,377,829	+		LRK55_RS10790	0.36	+0.4
2,377,830	-		LRK55_RS10790	0.36	+0.2
2,377,830	-		LRK55_RS10790	0.36	+1.1
2,377,830	-		LRK55_RS10790	0.36	+1.0
2,377,830	-		LRK55_RS10790	0.36	+0.7
2,377,830	-		LRK55_RS10790	0.36	-0.4
2,377,830	-		LRK55_RS10790	0.36	-1.1
2,377,830	-		LRK55_RS10790	0.36	-0.5
2,377,830	-		LRK55_RS10790	0.36	+0.2
2,377,830	-		LRK55_RS10790	0.36	+0.1
2,377,830	-		LRK55_RS10790	0.36	+1.6
2,377,871	+		LRK55_RS10790	0.39	+1.4
2,377,871	+		LRK55_RS10790	0.39	+0.9
2,377,871	+		LRK55_RS10790	0.39	-0.4
2,377,872	-		LRK55_RS10790	0.39	+0.3
2,377,976	+		LRK55_RS10790	0.47	-1.2
2,377,976	+		LRK55_RS10790	0.47	-0.4
2,377,976	+		LRK55_RS10790	0.47	-0.1
2,377,976	+		LRK55_RS10790	0.47	+1.0
2,377,976	+		LRK55_RS10790	0.47	+2.4
2,377,976	+		LRK55_RS10790	0.47	+1.3
2,377,976	+		LRK55_RS10790	0.47	+0.9
2,377,976	+		LRK55_RS10790	0.47	-0.4
2,377,976	+		LRK55_RS10790	0.47	-0.6
2,377,976	+		LRK55_RS10790	0.47	+1.0
2,377,977	-		LRK55_RS10790	0.47	+0.1
2,377,977	-		LRK55_RS10790	0.47	-1.0
2,377,977	-		LRK55_RS10790	0.47	+0.1
2,377,977	-		LRK55_RS10790	0.47	-1.0
2,377,977	-		LRK55_RS10790	0.47	-0.3
2,377,977	-		LRK55_RS10790	0.47	+0.7
2,377,977	-		LRK55_RS10790	0.47	+0.2
2,377,977	-		LRK55_RS10790	0.47	-0.1
2,377,977	-		LRK55_RS10790	0.47	-0.6
2,377,977	-		LRK55_RS10790	0.47	+0.3
2,378,066	-		LRK55_RS10790	0.53	+0.6