Experiment: R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt LRK55_RS07740 and LRK55_RS07745 are separated by 27 nucleotides LRK55_RS07745 and LRK55_RS07750 overlap by 1 nucleotides LRK55_RS07750 and LRK55_RS07755 are separated by 49 nucleotides
LRK55_RS07740: LRK55_RS07740 - TraR/DksA family transcriptional regulator, at 1,705,150 to 1,705,533
_RS07740
LRK55_RS07745: LRK55_RS07745 - redoxin domain-containing protein, at 1,705,561 to 1,706,073
_RS07745
LRK55_RS07750: LRK55_RS07750 - DsbA family protein, at 1,706,073 to 1,706,621
_RS07750
LRK55_RS07755: LRK55_RS07755 - M20 family metallopeptidase, at 1,706,671 to 1,707,927
_RS07755
Position (kb) 1706
1707 Strain fitness (log2 ratio) -2
-1
0
1 at 1705.079 kb on + strand at 1705.079 kb on + strand at 1705.079 kb on + strand at 1705.080 kb on - strand at 1705.424 kb on - strand, within LRK55_RS07740 at 1705.424 kb on - strand, within LRK55_RS07740 at 1705.672 kb on + strand, within LRK55_RS07745 at 1705.672 kb on + strand, within LRK55_RS07745 at 1705.673 kb on - strand, within LRK55_RS07745 at 1705.673 kb on - strand, within LRK55_RS07745 at 1705.717 kb on + strand, within LRK55_RS07745 at 1705.717 kb on + strand, within LRK55_RS07745 at 1705.718 kb on - strand, within LRK55_RS07745 at 1705.820 kb on - strand, within LRK55_RS07745 at 1705.873 kb on + strand, within LRK55_RS07745 at 1705.882 kb on + strand, within LRK55_RS07745 at 1705.882 kb on + strand, within LRK55_RS07745 at 1705.883 kb on - strand, within LRK55_RS07745 at 1705.883 kb on - strand, within LRK55_RS07745 at 1706.362 kb on - strand, within LRK55_RS07750 at 1706.362 kb on - strand, within LRK55_RS07750 at 1706.362 kb on - strand, within LRK55_RS07750 at 1706.362 kb on - strand, within LRK55_RS07750 at 1706.362 kb on - strand, within LRK55_RS07750 at 1706.362 kb on - strand, within LRK55_RS07750 at 1706.554 kb on - strand, within LRK55_RS07750 at 1706.559 kb on + strand, within LRK55_RS07750 at 1706.559 kb on + strand, within LRK55_RS07750 at 1706.559 kb on + strand, within LRK55_RS07750 at 1706.734 kb on + strand at 1706.735 kb on - strand at 1706.735 kb on - strand at 1706.735 kb on - strand at 1706.735 kb on - strand at 1706.821 kb on + strand, within LRK55_RS07755 at 1707.598 kb on + strand, within LRK55_RS07755 at 1707.598 kb on + strand, within LRK55_RS07755 at 1707.599 kb on - strand, within LRK55_RS07755 at 1707.599 kb on - strand, within LRK55_RS07755 at 1707.599 kb on - strand, within LRK55_RS07755 at 1707.599 kb on - strand, within LRK55_RS07755
Per-strain Table
Position Strand Gene LocusTag Fraction R2A_PIPES with Manganese (II) chloride tetrahydrate 1 mM remove 1,705,079 + +0.1 1,705,079 + +1.1 1,705,079 + -1.3 1,705,080 - +0.6 1,705,424 - LRK55_RS07740 0.71 +1.3 1,705,424 - LRK55_RS07740 0.71 -0.6 1,705,672 + LRK55_RS07745 0.22 -0.8 1,705,672 + LRK55_RS07745 0.22 +0.4 1,705,673 - LRK55_RS07745 0.22 +0.3 1,705,673 - LRK55_RS07745 0.22 -0.1 1,705,717 + LRK55_RS07745 0.30 +1.2 1,705,717 + LRK55_RS07745 0.30 +1.0 1,705,718 - LRK55_RS07745 0.31 +1.1 1,705,820 - LRK55_RS07745 0.50 -0.1 1,705,873 + LRK55_RS07745 0.61 -0.2 1,705,882 + LRK55_RS07745 0.63 +0.8 1,705,882 + LRK55_RS07745 0.63 -0.2 1,705,883 - LRK55_RS07745 0.63 -1.0 1,705,883 - LRK55_RS07745 0.63 -0.9 1,706,362 - LRK55_RS07750 0.53 +0.7 1,706,362 - LRK55_RS07750 0.53 -1.7 1,706,362 - LRK55_RS07750 0.53 -0.2 1,706,362 - LRK55_RS07750 0.53 +0.3 1,706,362 - LRK55_RS07750 0.53 -0.2 1,706,362 - LRK55_RS07750 0.53 +0.1 1,706,554 - LRK55_RS07750 0.88 -0.5 1,706,559 + LRK55_RS07750 0.89 -1.4 1,706,559 + LRK55_RS07750 0.89 +0.8 1,706,559 + LRK55_RS07750 0.89 -0.7 1,706,734 + -0.3 1,706,735 - -2.3 1,706,735 - +0.4 1,706,735 - -0.9 1,706,735 - +0.1 1,706,821 + LRK55_RS07755 0.12 +0.2 1,707,598 + LRK55_RS07755 0.74 -1.0 1,707,598 + LRK55_RS07755 0.74 -0.3 1,707,599 - LRK55_RS07755 0.74 +0.3 1,707,599 - LRK55_RS07755 0.74 +1.4 1,707,599 - LRK55_RS07755 0.74 -1.3 1,707,599 - LRK55_RS07755 0.74 +0.8
Or see this region's nucleotide sequence