Strain Fitness in Castellaniella sp019104865 MT123 around ABCV34_RS15165

Experiment: Anaerobic; Aluminium sulfate 215 uM

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Anaerobic; Aluminium sulfate 215 uM
3,218,419	+		ABCV34_RS15160	0.75	-4.7
3,218,419	+		ABCV34_RS15160	0.75	-4.0
3,218,419	+		ABCV34_RS15160	0.75	-3.3
3,218,419	+		ABCV34_RS15160	0.75	-5.0
3,218,419	+		ABCV34_RS15160	0.75	-3.8
3,218,419	+		ABCV34_RS15160	0.75	-4.3
3,218,420	-		ABCV34_RS15160	0.75	-2.1
3,218,420	-		ABCV34_RS15160	0.75	-3.5
3,218,420	-		ABCV34_RS15160	0.75	-4.3
3,218,420	-		ABCV34_RS15160	0.75	-3.6
3,218,420	-		ABCV34_RS15160	0.75	-1.1
3,218,420	-		ABCV34_RS15160	0.75	-3.1
3,218,461	-		ABCV34_RS15160	0.76	-4.4
3,218,461	-		ABCV34_RS15160	0.76	-0.4
3,218,574	+		ABCV34_RS15160	0.79	-4.2
3,218,692	+		ABCV34_RS15160	0.82	-3.8
3,218,692	+		ABCV34_RS15160	0.82	-3.1
3,218,692	+		ABCV34_RS15160	0.82	-1.7
3,218,692	+		ABCV34_RS15160	0.82	-4.0
3,218,692	+		ABCV34_RS15160	0.82	-5.4
3,218,736	+		ABCV34_RS15160	0.83	-4.2
3,218,761	+		ABCV34_RS15160	0.84	-3.5
3,218,762	-		ABCV34_RS15160	0.84	-0.7
3,218,882	+		ABCV34_RS15160	0.87	-0.7
3,218,882	+		ABCV34_RS15160	0.87	-2.4
3,218,882	+		ABCV34_RS15160	0.87	-5.7
3,218,882	+		ABCV34_RS15160	0.87	-1.8
3,218,883	-		ABCV34_RS15160	0.87	-1.1
3,218,883	-		ABCV34_RS15160	0.87	-3.1
3,218,883	-		ABCV34_RS15160	0.87	-3.5
3,218,883	-		ABCV34_RS15160	0.87	-3.4
3,218,883	-		ABCV34_RS15160	0.87	-1.2
3,218,932	+		ABCV34_RS15160	0.88	-4.6
3,218,932	+		ABCV34_RS15160	0.88	-3.8
3,218,932	+		ABCV34_RS15160	0.88	-4.4
3,218,933	-		ABCV34_RS15160	0.88	-3.2
3,218,933	-		ABCV34_RS15160	0.88	-3.5
3,218,933	-		ABCV34_RS15160	0.88	-4.2
3,218,933	-		ABCV34_RS15160	0.88	-1.7
3,218,933	-		ABCV34_RS15160	0.88	-5.1
3,219,115	+				-1.9
3,219,115	+				-2.2
3,219,115	+				-3.4
3,219,115	+				-3.2
3,219,115	+				-3.4
3,219,115	+				-3.7
3,219,115	+				-4.5
3,219,115	+				-3.9
3,219,115	+				-3.1
3,219,116	-				-3.1
3,219,116	-				-2.9
3,219,116	-				-3.0
3,219,116	-				-5.3
3,219,116	-				-2.4
3,219,116	-				-3.0
3,219,116	-				-3.4
3,219,116	-				-4.2
3,219,116	-				-1.7
3,219,116	-				-2.4
3,219,116	-				-3.6
3,219,247	+				-3.1
3,219,248	-				-2.3
3,219,259	+				-3.7
3,219,259	+				-4.0
3,219,259	+				-4.9
3,219,259	+				-4.7
3,219,259	+				-3.6
3,219,260	-				-2.7
3,219,347	+				-1.4
3,219,348	-				-3.7
3,219,455	-				-3.5
3,219,455	-				-4.0
3,219,455	-				-4.2
3,219,494	+				-4.3
3,219,494	+				-2.1
3,219,494	+				-4.6
3,219,494	+				-2.4
3,219,494	+				-4.6
3,219,494	+				-3.5
3,219,495	-				-4.0
3,219,495	-				-2.4
3,219,495	-				-4.8
3,219,495	-				-2.9
3,219,495	-				-3.9
3,219,537	-				-3.6
3,219,680	+		ABCV34_RS15165	0.19	-5.0
3,219,680	+		ABCV34_RS15165	0.19	-3.8
3,219,680	+		ABCV34_RS15165	0.19	-3.2
3,219,680	+		ABCV34_RS15165	0.19	-3.5
3,219,681	-		ABCV34_RS15165	0.19	-3.4
3,219,681	-		ABCV34_RS15165	0.19	-1.9
3,219,683	+		ABCV34_RS15165	0.19	-2.5
3,219,684	-		ABCV34_RS15165	0.20	-3.8
3,219,684	-		ABCV34_RS15165	0.20	-2.9
3,219,684	-		ABCV34_RS15165	0.20	-4.0
3,219,684	-		ABCV34_RS15165	0.20	-5.5
3,219,698	+		ABCV34_RS15165	0.20	-4.0
3,219,698	+		ABCV34_RS15165	0.20	-3.7
3,219,698	+		ABCV34_RS15165	0.20	-2.1
3,219,699	-		ABCV34_RS15165	0.20	-2.9
3,219,699	-		ABCV34_RS15165	0.20	-2.7
3,219,704	+		ABCV34_RS15165	0.21	-4.2
3,219,710	+		ABCV34_RS15165	0.21	-3.4
3,219,710	+		ABCV34_RS15165	0.21	-2.7
3,219,710	+		ABCV34_RS15165	0.21	-3.1
3,219,710	+		ABCV34_RS15165	0.21	-1.5
3,219,710	+		ABCV34_RS15165	0.21	-4.2
3,219,711	-		ABCV34_RS15165	0.21	-4.1
3,219,711	-		ABCV34_RS15165	0.21	-3.5
3,219,711	-		ABCV34_RS15165	0.21	-1.1
3,219,711	-		ABCV34_RS15165	0.21	-4.3
3,219,854	+		ABCV34_RS15165	0.31	-4.1
3,219,854	+		ABCV34_RS15165	0.31	-4.8
3,219,854	+		ABCV34_RS15165	0.31	-5.5
3,219,854	+		ABCV34_RS15165	0.31	-3.4
3,219,854	+		ABCV34_RS15165	0.31	-3.7
3,219,854	+		ABCV34_RS15165	0.31	-1.7
3,219,855	-		ABCV34_RS15165	0.31	-4.7
3,219,855	-		ABCV34_RS15165	0.31	-5.1
3,219,855	-		ABCV34_RS15165	0.31	-3.7
3,219,855	-		ABCV34_RS15165	0.31	-3.4
3,219,884	+		ABCV34_RS15165	0.32	-1.4
3,219,884	+		ABCV34_RS15165	0.32	-2.2
3,219,884	+		ABCV34_RS15165	0.32	-3.8
3,219,885	-		ABCV34_RS15165	0.33	-3.3
3,219,885	-		ABCV34_RS15165	0.33	-4.1
3,219,885	-		ABCV34_RS15165	0.33	-3.4
3,219,885	-		ABCV34_RS15165	0.33	-3.4
3,219,914	+		ABCV34_RS15165	0.34	-4.4
3,219,914	+		ABCV34_RS15165	0.34	-3.4
3,219,914	+		ABCV34_RS15165	0.34	-4.6
3,219,914	+		ABCV34_RS15165	0.34	-4.4
3,219,914	+		ABCV34_RS15165	0.34	-3.0
3,219,914	+		ABCV34_RS15165	0.34	-3.9
3,219,914	+		ABCV34_RS15165	0.34	-3.4
3,219,914	+		ABCV34_RS15165	0.34	-3.8
3,219,914	+		ABCV34_RS15165	0.34	-4.4
3,219,914	+		ABCV34_RS15165	0.34	-2.1
3,219,915	-		ABCV34_RS15165	0.35	-4.8
3,219,915	-		ABCV34_RS15165	0.35	-3.1
3,219,943	-		ABCV34_RS15165	0.36	-4.2
3,219,983	+		ABCV34_RS15165	0.39	-3.6
3,219,983	+		ABCV34_RS15165	0.39	-4.1
3,219,983	+		ABCV34_RS15165	0.39	-3.0
3,219,983	+		ABCV34_RS15165	0.39	-4.1
3,219,983	+		ABCV34_RS15165	0.39	-3.5
3,219,983	+		ABCV34_RS15165	0.39	-3.9
3,219,984	-		ABCV34_RS15165	0.39	-2.7
3,219,984	-		ABCV34_RS15165	0.39	-3.7
3,219,984	-		ABCV34_RS15165	0.39	-3.7
3,219,984	-		ABCV34_RS15165	0.39	-3.9
3,219,984	-		ABCV34_RS15165	0.39	-4.1
3,220,064	+		ABCV34_RS15165	0.44	-3.3
3,220,064	+		ABCV34_RS15165	0.44	-3.0
3,220,064	+		ABCV34_RS15165	0.44	-3.5
3,220,064	+		ABCV34_RS15165	0.44	-4.0
3,220,065	-		ABCV34_RS15165	0.44	-5.1
3,220,076	+		ABCV34_RS15165	0.45	-4.8
3,220,076	+		ABCV34_RS15165	0.45	-5.0
3,220,076	+		ABCV34_RS15165	0.45	-3.7
3,220,076	+		ABCV34_RS15165	0.45	-3.5
3,220,076	+		ABCV34_RS15165	0.45	-3.2
3,220,076	+		ABCV34_RS15165	0.45	-3.7
3,220,076	+		ABCV34_RS15165	0.45	-2.1
3,220,077	-		ABCV34_RS15165	0.45	-3.8
3,220,077	-		ABCV34_RS15165	0.45	-3.2
3,220,077	-		ABCV34_RS15165	0.45	-4.5
3,220,077	-		ABCV34_RS15165	0.45	-3.2
3,220,077	-		ABCV34_RS15165	0.45	-1.5
3,220,077	-		ABCV34_RS15165	0.45	-2.3
3,220,077	-		ABCV34_RS15165	0.45	-2.1
3,220,079	+		ABCV34_RS15165	0.45	-2.9
3,220,079	+		ABCV34_RS15165	0.45	-2.2
3,220,079	+		ABCV34_RS15165	0.45	-3.8
3,220,079	+		ABCV34_RS15165	0.45	-5.0
3,220,079	+		ABCV34_RS15165	0.45	-4.5
3,220,079	+		ABCV34_RS15165	0.45	-3.8
3,220,079	+		ABCV34_RS15165	0.45	-4.9
3,220,079	+		ABCV34_RS15165	0.45	-4.7
3,220,080	-		ABCV34_RS15165	0.45	-3.2
3,220,080	-		ABCV34_RS15165	0.45	-3.9
3,220,080	-		ABCV34_RS15165	0.45	-2.7
3,220,080	-		ABCV34_RS15165	0.45	-3.5
3,220,080	-		ABCV34_RS15165	0.45	-2.5
3,220,202	+		ABCV34_RS15165	0.53	-3.4
3,220,202	+		ABCV34_RS15165	0.53	-3.9
3,220,202	+		ABCV34_RS15165	0.53	-4.3
3,220,203	-		ABCV34_RS15165	0.53	-2.9
3,220,203	-		ABCV34_RS15165	0.53	-3.0
3,220,203	-		ABCV34_RS15165	0.53	-4.0
3,220,256	+		ABCV34_RS15165	0.57	-3.9
3,220,256	+		ABCV34_RS15165	0.57	-4.8
3,220,256	+		ABCV34_RS15165	0.57	-3.4
3,220,256	+		ABCV34_RS15165	0.57	-2.9
3,220,256	+		ABCV34_RS15165	0.57	-3.2
3,220,257	-		ABCV34_RS15165	0.57	-2.1
3,220,257	-		ABCV34_RS15165	0.57	-0.1
3,220,257	-		ABCV34_RS15165	0.57	-0.7
3,220,257	-		ABCV34_RS15165	0.57	-3.5
3,220,370	+		ABCV34_RS15165	0.64	-4.9
3,220,372	+		ABCV34_RS15165	0.64	-3.0
3,220,373	-		ABCV34_RS15165	0.64	-3.6
3,220,373	-		ABCV34_RS15165	0.64	-2.1
3,220,373	-		ABCV34_RS15165	0.64	-4.2
3,220,373	-		ABCV34_RS15165	0.64	-3.8
3,220,418	+		ABCV34_RS15165	0.67	-5.1
3,220,442	+		ABCV34_RS15165	0.69	-3.2
3,220,442	+		ABCV34_RS15165	0.69	-4.2
3,220,442	+		ABCV34_RS15165	0.69	-5.1
3,220,442	+		ABCV34_RS15165	0.69	-2.2
3,220,442	+		ABCV34_RS15165	0.69	-4.1
3,220,442	+		ABCV34_RS15165	0.69	-3.3
3,220,442	+		ABCV34_RS15165	0.69	-2.9
3,220,443	-		ABCV34_RS15165	0.69	-4.2
3,220,443	-		ABCV34_RS15165	0.69	-4.0
3,220,443	-		ABCV34_RS15165	0.69	-1.1
3,220,443	-		ABCV34_RS15165	0.69	-3.8
3,220,443	-		ABCV34_RS15165	0.69	-4.0
3,220,443	-		ABCV34_RS15165	0.69	-3.5
3,220,443	-		ABCV34_RS15165	0.69	-4.1
3,220,443	-		ABCV34_RS15165	0.69	-4.3
3,220,443	-		ABCV34_RS15165	0.69	-2.7
3,220,443	-		ABCV34_RS15165	0.69	-2.9
3,220,443	-		ABCV34_RS15165	0.69	-4.0
3,220,716	-		ABCV34_RS15165	0.86	-4.5
3,220,733	+		ABCV34_RS15165	0.88	-5.0
3,220,733	+		ABCV34_RS15165	0.88	-3.2
3,220,733	+		ABCV34_RS15165	0.88	-3.6
3,220,733	+		ABCV34_RS15165	0.88	-3.2
3,220,734	-		ABCV34_RS15165	0.88	-2.7
3,220,734	-		ABCV34_RS15165	0.88	-3.2
3,220,893	+				-2.9
3,220,893	+				-3.8
3,220,893	+				-1.3
3,220,893	+				-4.5
3,220,894	-				-1.3
3,220,894	-				-2.9
3,220,894	-				-2.7
3,220,894	-				-2.9
3,220,894	-				-4.0
3,220,944	+				-4.4
3,220,944	+				-3.9
3,220,944	+				-1.1
3,220,944	+				-3.8
3,220,944	+				-3.0
3,220,944	+				-3.5
3,220,944	+				-1.7
3,220,944	+				-3.7
3,220,944	+				-4.5
3,220,944	+				-3.4
3,220,944	+				-3.8
3,220,944	+				-4.1
3,220,944	+				-3.2
3,220,945	-				-4.3
3,220,945	-				-4.0
3,220,945	-				-2.7
3,220,945	-				-3.7
3,220,945	-				-2.2
3,220,945	-				-3.6
3,220,945	-				-4.4
3,220,945	-				-4.0
3,220,945	-				-3.8
3,220,945	-				-3.3
3,220,945	-				-3.9
3,220,945	-				-3.1
3,220,945	-				-2.1
3,220,945	-				-2.9
3,221,089	+		ABCV34_RS15170	0.22	-4.3
3,221,089	+		ABCV34_RS15170	0.22	-3.8
3,221,089	+		ABCV34_RS15170	0.22	-4.6
3,221,089	+		ABCV34_RS15170	0.22	-3.7
3,221,090	-		ABCV34_RS15170	0.22	-2.4
3,221,090	-		ABCV34_RS15170	0.22	-4.5
3,221,131	+		ABCV34_RS15170	0.28	-4.1
3,221,131	+		ABCV34_RS15170	0.28	-3.8
3,221,132	-		ABCV34_RS15170	0.28	-3.2
3,221,132	-		ABCV34_RS15170	0.28	-4.2
3,221,132	-		ABCV34_RS15170	0.28	-5.4
3,221,132	-		ABCV34_RS15170	0.28	-4.7
3,221,132	-		ABCV34_RS15170	0.28	-2.9
3,221,132	-		ABCV34_RS15170	0.28	-1.1
3,221,132	-		ABCV34_RS15170	0.28	-4.0
3,221,239	+		ABCV34_RS15170	0.44	-2.9
3,221,239	+		ABCV34_RS15170	0.44	-2.3
3,221,239	+		ABCV34_RS15170	0.44	-4.7
3,221,239	+		ABCV34_RS15170	0.44	-4.2
3,221,240	-		ABCV34_RS15170	0.44	-4.2
3,221,240	-		ABCV34_RS15170	0.44	-3.4
3,221,284	+		ABCV34_RS15170	0.50	-2.9
3,221,284	+		ABCV34_RS15170	0.50	-3.4
3,221,284	+		ABCV34_RS15170	0.50	-3.2
3,221,284	+		ABCV34_RS15170	0.50	-3.6
3,221,284	+		ABCV34_RS15170	0.50	-2.6
3,221,284	+		ABCV34_RS15170	0.50	-4.8
3,221,285	-		ABCV34_RS15170	0.50	-3.7
3,221,285	-		ABCV34_RS15170	0.50	-5.0
3,221,407	+		ABCV34_RS15170	0.68	-3.1
3,221,407	+		ABCV34_RS15170	0.68	-4.0
3,221,408	-		ABCV34_RS15170	0.68	-2.9
3,221,626	+				-2.9
3,221,626	+				-4.6
3,221,647	-				-4.2
3,221,674	+				-3.3
3,221,674	+				-4.8
3,221,674	+				-4.3
3,221,674	+				-3.5
3,221,674	+				-5.1
3,221,674	+				-4.0
3,221,675	-				-3.5
3,221,675	-				-1.4
3,221,680	+				-3.6
3,221,680	+				-2.6
3,221,680	+				-5.2
3,221,680	+				-3.4
3,221,680	+				-4.6
3,221,680	+				-3.7
3,221,680	+				-3.1
3,221,680	+				-2.1
3,221,681	-				-4.0
3,221,681	-				-1.4
3,221,681	-				-2.1
3,221,681	-				-3.7
3,221,681	-				-4.4
3,221,681	-				-1.4
3,221,681	-				-4.1
3,221,737	+		ABCV34_RS15175	0.14	-3.7
3,221,737	+		ABCV34_RS15175	0.14	-3.6
3,221,737	+		ABCV34_RS15175	0.14	-3.3
3,221,737	+		ABCV34_RS15175	0.14	-4.8
3,221,737	+		ABCV34_RS15175	0.14	-3.7
3,221,737	+		ABCV34_RS15175	0.14	-3.4
3,221,737	+		ABCV34_RS15175	0.14	-3.9
3,221,737	+		ABCV34_RS15175	0.14	-2.1
3,221,737	+		ABCV34_RS15175	0.14	-3.3
3,221,737	+		ABCV34_RS15175	0.14	-4.0
3,221,738	-		ABCV34_RS15175	0.15	-4.4
3,221,738	-		ABCV34_RS15175	0.15	-4.1
3,221,738	-		ABCV34_RS15175	0.15	-5.4
3,221,738	-		ABCV34_RS15175	0.15	-3.7
3,221,738	-		ABCV34_RS15175	0.15	-5.2
3,221,738	-		ABCV34_RS15175	0.15	-4.3
3,221,738	-		ABCV34_RS15175	0.15	-3.8
3,221,738	-		ABCV34_RS15175	0.15	-4.1
3,221,738	-		ABCV34_RS15175	0.15	-2.8
3,221,738	-		ABCV34_RS15175	0.15	-3.5
3,221,870	-		ABCV34_RS15175	0.34	-3.6
3,221,874	+		ABCV34_RS15175	0.34	-3.7
3,221,874	+		ABCV34_RS15175	0.34	-4.9
3,221,874	+		ABCV34_RS15175	0.34	-4.4
3,221,874	+		ABCV34_RS15175	0.34	-3.5
3,221,875	-		ABCV34_RS15175	0.34	-3.1
3,221,875	-		ABCV34_RS15175	0.34	-2.1