Strain Fitness in Castellaniella sp019104865 MT123 around ABCV34_RS06835

Experiment: Anaerobic; FW104 COMM 1 X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Anaerobic; FW104 COMM 1 X
1,474,589	+		ABCV34_RS06830	0.58	-1.6
1,474,590	-		ABCV34_RS06830	0.58	-2.4
1,474,590	-		ABCV34_RS06830	0.58	-1.3
1,474,799	+		ABCV34_RS06830	0.73	-2.2
1,474,799	+		ABCV34_RS06830	0.73	-2.1
1,474,799	+		ABCV34_RS06830	0.73	-2.1
1,474,800	-		ABCV34_RS06830	0.73	-3.7
1,474,999	-		ABCV34_RS06830	0.87	-4.2
1,475,002	+		ABCV34_RS06830	0.88	-3.0
1,475,002	+		ABCV34_RS06830	0.88	-1.9
1,475,028	+		ABCV34_RS06830	0.89	-3.2
1,475,028	+		ABCV34_RS06830	0.89	-1.5
1,475,028	+		ABCV34_RS06830	0.89	-2.5
1,475,028	+		ABCV34_RS06830	0.89	-1.0
1,475,028	+		ABCV34_RS06830	0.89	-2.0
1,475,028	+		ABCV34_RS06830	0.89	-2.2
1,475,028	+		ABCV34_RS06830	0.89	-2.1
1,475,029	-		ABCV34_RS06830	0.89	-2.8
1,475,029	-		ABCV34_RS06830	0.89	-2.7
1,475,029	-		ABCV34_RS06830	0.89	-3.0
1,475,029	-		ABCV34_RS06830	0.89	-3.3
1,475,029	-		ABCV34_RS06830	0.89	-2.0
1,475,037	+				-1.7
1,475,057	+				-1.6
1,475,057	+				-1.6
1,475,057	+				-2.2
1,475,058	-				-2.2
1,475,058	-				-2.9
1,475,058	-				-2.6
1,475,058	-				+0.4
1,475,175	+				-1.8
1,475,175	+				-1.3
1,475,175	+				-3.4
1,475,175	+				-1.9
1,475,175	+				-2.5
1,475,175	+				-1.8
1,475,175	+				-1.6
1,475,175	+				-2.0
1,475,175	+				-1.2
1,475,175	+				-2.1
1,475,176	-				-2.3
1,475,176	-				-0.0
1,475,176	-				-3.0
1,475,176	-				-2.8
1,475,176	-				-2.9
1,475,176	-				-2.7
1,475,176	-				-0.6
1,475,176	-				-2.3
1,475,176	-				-3.3
1,475,176	-				-1.6
1,475,176	-				-3.7
1,475,176	-				-4.9
1,475,176	-				-2.8
1,475,176	-				-2.3
1,475,176	-				-2.0
1,475,176	-				-1.0
1,475,231	-				-0.0
1,475,243	+				-2.0
1,475,258	+				-1.8
1,475,258	+				-1.7
1,475,259	-				-3.3
1,475,259	-				-3.8
1,475,265	+				-1.0
1,475,265	+				-2.6
1,475,266	-				-6.0
1,475,279	+				-1.6
1,475,279	+				-0.0
1,475,279	+				-2.8
1,475,280	-				-0.6
1,475,280	-				-2.3
1,475,280	-				-3.9
1,475,280	-				-2.0
1,475,280	-				-4.2
1,475,280	-				-3.6
1,475,280	-				-3.3
1,475,284	+				-2.3
1,475,284	+				-0.5
1,475,284	+				-2.9
1,475,285	-				-4.4
1,475,285	-				-3.6
1,475,371	+				-3.4
1,475,371	+				-4.1
1,475,372	-				-3.0
1,475,372	-				-2.0
1,475,372	-				-2.0
1,475,384	+				-2.8
1,475,385	-				-0.0
1,475,385	-				-3.9
1,475,385	-				-3.3
1,475,385	-				-5.2
1,475,401	+				-2.8
1,475,401	+				-2.2
1,475,401	+				-0.7
1,475,401	+				-1.0
1,475,401	+				-2.4
1,475,401	+				-1.8
1,475,401	+				-2.3
1,475,401	+				-2.4
1,475,401	+				-2.0
1,475,402	-				-3.0
1,475,402	-				-0.0
1,475,402	-				-1.6
1,475,402	-				-1.3
1,475,402	-				-1.6
1,475,402	-				-2.0
1,475,403	+				-3.9
1,475,403	+				-4.2
1,475,403	+				-4.7
1,475,403	+				-2.9
1,475,404	-				-4.3
1,475,404	-				-2.3
1,475,404	-				-3.9
1,475,444	-				-2.3
1,475,456	+				-4.1
1,475,456	+				-4.8
1,475,456	+				-2.6
1,475,456	+				-6.9
1,475,456	+				-3.9
1,475,456	+				-6.3
1,475,456	+				-2.2
1,475,456	+				-2.3
1,475,457	-				-2.8
1,475,457	-				-1.6
1,475,457	-				-4.5
1,475,457	-				-2.8
1,475,457	-				-2.6
1,475,458	+				-3.0
1,475,458	+				-2.8
1,475,458	+				-4.1
1,475,458	+				-6.2
1,475,458	+				-5.0
1,475,458	+				-2.6
1,475,458	+				-5.2
1,475,458	+				-5.2
1,475,458	+				-5.0
1,475,458	+				-6.4
1,475,458	+				-5.5
1,475,458	+				-3.8
1,475,458	+				-5.3
1,475,458	+				-3.3
1,475,458	+				-3.9
1,475,458	+				-5.5
1,475,458	+				-3.7
1,475,458	+				-4.4
1,475,459	-				-2.3
1,475,459	-				-4.9
1,475,459	-				-2.0
1,475,459	-				-1.8
1,475,459	-				-1.0
1,475,459	-				-2.6
1,475,459	-				-5.0
1,475,459	-				-3.7
1,475,459	-				-4.5
1,475,459	-				-3.3
1,475,459	-				-3.5
1,475,461	-				-2.0
1,475,645	-		ABCV34_RS06835	0.19	-2.6
1,475,665	-		ABCV34_RS06835	0.22	-4.1
1,475,665	-		ABCV34_RS06835	0.22	-2.6
1,475,694	+		ABCV34_RS06835	0.26	-3.6
1,475,694	+		ABCV34_RS06835	0.26	-5.5
1,475,694	+		ABCV34_RS06835	0.26	-4.7
1,475,694	+		ABCV34_RS06835	0.26	-4.8
1,475,694	+		ABCV34_RS06835	0.26	-2.7
1,475,694	+		ABCV34_RS06835	0.26	-4.0
1,475,694	+		ABCV34_RS06835	0.26	-5.2
1,475,694	+		ABCV34_RS06835	0.26	-5.1
1,475,694	+		ABCV34_RS06835	0.26	-5.5
1,475,694	+		ABCV34_RS06835	0.26	-6.2
1,475,694	+		ABCV34_RS06835	0.26	-4.8
1,475,694	+		ABCV34_RS06835	0.26	-6.0
1,475,694	+		ABCV34_RS06835	0.26	-2.6
1,475,695	-		ABCV34_RS06835	0.26	-2.8
1,475,695	-		ABCV34_RS06835	0.26	-1.0
1,475,695	-		ABCV34_RS06835	0.26	-1.6
1,475,695	-		ABCV34_RS06835	0.26	-3.3
1,475,695	-		ABCV34_RS06835	0.26	-1.6
1,475,695	-		ABCV34_RS06835	0.26	-3.5
1,475,695	-		ABCV34_RS06835	0.26	-1.6
1,475,765	+		ABCV34_RS06835	0.35	-3.6
1,475,765	+		ABCV34_RS06835	0.35	-4.3
1,475,765	+		ABCV34_RS06835	0.35	-4.5
1,475,765	+		ABCV34_RS06835	0.35	-4.4
1,475,766	-		ABCV34_RS06835	0.35	-2.0
1,475,766	-		ABCV34_RS06835	0.35	-1.6
1,476,040	+		ABCV34_RS06835	0.73	-4.9
1,476,040	+		ABCV34_RS06835	0.73	-3.6
1,476,040	+		ABCV34_RS06835	0.73	-4.9
1,476,040	+		ABCV34_RS06835	0.73	-3.7
1,476,041	-		ABCV34_RS06835	0.73	-2.0
1,476,370	-		ABCV34_RS06840	0.44	-2.3
1,476,371	+		ABCV34_RS06840	0.44	-1.0
1,476,371	+		ABCV34_RS06840	0.44	-1.2
1,476,371	+		ABCV34_RS06840	0.44	-0.6
1,476,371	+		ABCV34_RS06840	0.44	-0.6
1,476,371	+		ABCV34_RS06840	0.44	-2.3
1,476,371	+		ABCV34_RS06840	0.44	-1.8
1,476,371	+		ABCV34_RS06840	0.44	-2.6
1,476,372	-		ABCV34_RS06840	0.45	-0.0
1,476,372	-		ABCV34_RS06840	0.45	-1.0
1,476,372	-		ABCV34_RS06840	0.45	-0.2
1,476,372	-		ABCV34_RS06840	0.45	-1.0
1,476,372	-		ABCV34_RS06840	0.45	-2.3
1,476,372	-		ABCV34_RS06840	0.45	-1.1
1,476,372	-		ABCV34_RS06840	0.45	-1.9
1,476,536	-				+0.6
1,476,548	+				-0.9
1,476,629	+		ABCV34_RS06845	0.35	-2.6
1,476,630	-		ABCV34_RS06845	0.35	-4.3
1,476,761	-				-3.7
1,476,798	+				-3.0
1,476,798	+				-2.8
1,476,798	+				-3.7
1,476,798	+				-3.3
1,476,799	-				-2.0
1,476,799	-				-5.2
1,476,799	-				-1.6
1,476,799	-				-4.7
1,476,799	-				-3.3
1,476,799	-				-2.3
1,476,799	-				-6.2
1,476,874	-				-3.2
1,476,874	-				-2.0
1,477,194	+		ABCV34_RS06850	0.27	-2.6