Strain Fitness in Castellaniella sp019104865 MT123 around ABCV34_RS08540

Experiment: Anaerobic; FW104 COMM 1 X

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Anaerobic; FW104 COMM 1 X
1,818,425	+		ABCV34_RS08530	0.72	-2.4
1,818,425	+		ABCV34_RS08530	0.72	-2.1
1,818,425	+		ABCV34_RS08530	0.72	-2.2
1,818,425	+		ABCV34_RS08530	0.72	-2.4
1,818,425	+		ABCV34_RS08530	0.72	-1.9
1,818,425	+		ABCV34_RS08530	0.72	-2.8
1,818,425	+		ABCV34_RS08530	0.72	-2.4
1,818,426	-		ABCV34_RS08530	0.72	-1.6
1,818,426	-		ABCV34_RS08530	0.72	+0.9
1,818,426	-		ABCV34_RS08530	0.72	-1.6
1,818,426	-		ABCV34_RS08530	0.72	-2.9
1,818,426	-		ABCV34_RS08530	0.72	-1.1
1,818,426	-		ABCV34_RS08530	0.72	-1.1
1,818,426	-		ABCV34_RS08530	0.72	-0.1
1,818,426	-		ABCV34_RS08530	0.72	-2.1
1,818,426	-		ABCV34_RS08530	0.72	-2.7
1,819,300	+				-1.5
1,819,300	+				-1.5
1,819,300	+				-0.6
1,819,301	-				-0.1
1,819,301	-				-1.6
1,819,301	-				-1.6
1,819,301	-				-0.1
1,819,398	-				-2.4
1,819,453	+				-1.5
1,819,459	+		ABCV34_RS08540	0.11	-1.4
1,819,459	+		ABCV34_RS08540	0.11	-3.4
1,819,459	+		ABCV34_RS08540	0.11	-2.2
1,819,459	+		ABCV34_RS08540	0.11	-0.1
1,819,460	-		ABCV34_RS08540	0.11	-1.6
1,819,460	-		ABCV34_RS08540	0.11	-2.0
1,819,460	-		ABCV34_RS08540	0.11	-2.8
1,819,460	-		ABCV34_RS08540	0.11	-1.6
1,819,460	-		ABCV34_RS08540	0.11	-2.0
1,819,460	-		ABCV34_RS08540	0.11	-1.5
1,819,460	-		ABCV34_RS08540	0.11	-2.1
1,819,488	-		ABCV34_RS08540	0.14	-1.7
1,819,488	-		ABCV34_RS08540	0.14	-1.1
1,819,615	+		ABCV34_RS08540	0.27	-1.6
1,819,615	+		ABCV34_RS08540	0.27	-1.1
1,819,615	+		ABCV34_RS08540	0.27	-0.8
1,819,615	+		ABCV34_RS08540	0.27	-1.6
1,819,615	+		ABCV34_RS08540	0.27	-2.9
1,819,616	-		ABCV34_RS08540	0.28	-1.5
1,819,616	-		ABCV34_RS08540	0.28	-2.4
1,819,616	-		ABCV34_RS08540	0.28	-2.4
1,819,616	-		ABCV34_RS08540	0.28	-1.3
1,819,616	-		ABCV34_RS08540	0.28	-2.8
1,819,640	+		ABCV34_RS08540	0.30	-1.1
1,819,640	+		ABCV34_RS08540	0.30	-1.6
1,819,640	+		ABCV34_RS08540	0.30	+0.9
1,819,640	+		ABCV34_RS08540	0.30	-0.6
1,819,640	+		ABCV34_RS08540	0.30	-2.4
1,819,641	-		ABCV34_RS08540	0.30	-0.2
1,819,641	-		ABCV34_RS08540	0.30	-1.2
1,819,641	-		ABCV34_RS08540	0.30	-0.9
1,819,711	+		ABCV34_RS08540	0.38	-2.2
1,819,765	+		ABCV34_RS08540	0.44	-1.1
1,819,765	+		ABCV34_RS08540	0.44	-1.6
1,819,765	+		ABCV34_RS08540	0.44	-0.5
1,819,765	+		ABCV34_RS08540	0.44	+1.5
1,819,766	-		ABCV34_RS08540	0.44	-2.7
1,819,766	-		ABCV34_RS08540	0.44	-1.8
1,819,766	-		ABCV34_RS08540	0.44	-0.7
1,819,766	-		ABCV34_RS08540	0.44	-0.9
1,819,876	-		ABCV34_RS08540	0.56	-1.8
1,819,895	+		ABCV34_RS08540	0.58	-0.9
1,819,895	+		ABCV34_RS08540	0.58	-2.4
1,819,895	+		ABCV34_RS08540	0.58	-0.6
1,819,895	+		ABCV34_RS08540	0.58	-2.4
1,819,895	+		ABCV34_RS08540	0.58	-2.1
1,819,896	-		ABCV34_RS08540	0.58	-1.1
1,820,015	+		ABCV34_RS08540	0.71	-1.9
1,820,015	+		ABCV34_RS08540	0.71	-2.1
1,820,015	+		ABCV34_RS08540	0.71	-1.4
1,820,015	+		ABCV34_RS08540	0.71	+0.5
1,820,015	+		ABCV34_RS08540	0.71	-2.1
1,820,016	-		ABCV34_RS08540	0.71	-1.1
1,820,016	-		ABCV34_RS08540	0.71	-1.8
1,820,016	-		ABCV34_RS08540	0.71	-1.9
1,820,016	-		ABCV34_RS08540	0.71	-3.6
1,820,080	+		ABCV34_RS08540	0.78	-1.2
1,820,080	+		ABCV34_RS08540	0.78	-1.1
1,820,080	+		ABCV34_RS08540	0.78	-0.1
1,820,080	+		ABCV34_RS08540	0.78	+0.4
1,820,080	+		ABCV34_RS08540	0.78	-1.1
1,820,080	+		ABCV34_RS08540	0.78	-0.1
1,820,080	+		ABCV34_RS08540	0.78	-1.8
1,820,080	+		ABCV34_RS08540	0.78	-1.1
1,820,081	-		ABCV34_RS08540	0.78	-1.5
1,820,081	-		ABCV34_RS08540	0.78	-1.9
1,820,081	-		ABCV34_RS08540	0.78	-0.5
1,820,081	-		ABCV34_RS08540	0.78	-1.9
1,820,081	-		ABCV34_RS08540	0.78	-1.5
1,820,081	-		ABCV34_RS08540	0.78	-1.3
1,820,081	-		ABCV34_RS08540	0.78	-2.3
1,820,081	-		ABCV34_RS08540	0.78	-1.4
1,820,081	-		ABCV34_RS08540	0.78	-1.4
1,820,081	-		ABCV34_RS08540	0.78	-0.5
1,820,083	+		ABCV34_RS08540	0.78	-1.6
1,820,083	+		ABCV34_RS08540	0.78	-1.6
1,820,083	+		ABCV34_RS08540	0.78	-1.6
1,820,083	+		ABCV34_RS08540	0.78	-1.4
1,820,083	+		ABCV34_RS08540	0.78	-2.4
1,820,083	+		ABCV34_RS08540	0.78	-0.8
1,820,083	+		ABCV34_RS08540	0.78	-1.8
1,820,083	+		ABCV34_RS08540	0.78	-0.1
1,820,084	-		ABCV34_RS08540	0.78	-1.1
1,820,084	-		ABCV34_RS08540	0.78	-1.4
1,820,084	-		ABCV34_RS08540	0.78	-2.2
1,820,084	-		ABCV34_RS08540	0.78	-2.5
1,820,084	-		ABCV34_RS08540	0.78	-3.8
1,820,084	-		ABCV34_RS08540	0.78	-0.5
1,820,084	-		ABCV34_RS08540	0.78	-2.2
1,820,084	-		ABCV34_RS08540	0.78	-2.2
1,820,084	-		ABCV34_RS08540	0.78	-1.5
1,820,084	-		ABCV34_RS08540	0.78	-1.3
1,820,084	-		ABCV34_RS08540	0.78	-1.9
1,820,084	-		ABCV34_RS08540	0.78	-0.9
1,820,317	+				-2.1
1,820,321	+				-1.5
1,820,348	-				-1.9
1,820,519	+		ABCV34_RS08545	0.29	-2.1
1,820,519	+		ABCV34_RS08545	0.29	-2.9
1,820,520	-		ABCV34_RS08545	0.29	-1.9
1,820,520	-		ABCV34_RS08545	0.29	-2.4
1,820,557	-		ABCV34_RS08545	0.37	-1.2
1,820,606	+		ABCV34_RS08545	0.48	-2.9
1,820,606	+		ABCV34_RS08545	0.48	-1.6
1,820,607	-		ABCV34_RS08545	0.48	-2.1
1,820,607	-		ABCV34_RS08545	0.48	-2.2
1,820,607	-		ABCV34_RS08545	0.48	-1.9
1,820,607	-		ABCV34_RS08545	0.48	-3.1
1,820,610	+		ABCV34_RS08545	0.49	-2.1
1,820,610	+		ABCV34_RS08545	0.49	-2.6
1,820,611	-		ABCV34_RS08545	0.49	-2.3
1,820,611	-		ABCV34_RS08545	0.49	-1.8
1,820,611	-		ABCV34_RS08545	0.49	-0.9
1,820,616	+		ABCV34_RS08545	0.50	-2.5
1,820,616	+		ABCV34_RS08545	0.50	-1.6
1,820,616	+		ABCV34_RS08545	0.50	-1.6
1,820,616	+		ABCV34_RS08545	0.50	-0.9
1,820,617	-		ABCV34_RS08545	0.50	-1.8
1,820,617	-		ABCV34_RS08545	0.50	-1.1
1,820,617	-		ABCV34_RS08545	0.50	-1.6
1,820,617	-		ABCV34_RS08545	0.50	-2.6
1,820,617	-		ABCV34_RS08545	0.50	-2.2
1,820,617	-		ABCV34_RS08545	0.50	-2.9
1,820,617	-		ABCV34_RS08545	0.50	-2.2
1,820,671	-		ABCV34_RS08545	0.62	-1.5
1,820,671	-		ABCV34_RS08545	0.62	-1.9
1,820,858	+				-2.1
1,820,859	-				-1.9
1,820,903	+		ABCV34_RS08550	0.14	-1.0
1,820,903	+		ABCV34_RS08550	0.14	-1.9
1,820,903	+		ABCV34_RS08550	0.14	-2.6
1,820,903	+		ABCV34_RS08550	0.14	-2.4
1,820,903	+		ABCV34_RS08550	0.14	-1.9
1,820,903	+		ABCV34_RS08550	0.14	-1.0
1,820,903	+		ABCV34_RS08550	0.14	-0.4
1,820,903	+		ABCV34_RS08550	0.14	-1.5
1,820,903	+		ABCV34_RS08550	0.14	-1.4
1,820,903	+		ABCV34_RS08550	0.14	-2.5
1,820,903	+		ABCV34_RS08550	0.14	-0.6
1,820,903	+		ABCV34_RS08550	0.14	-0.9
1,820,903	+		ABCV34_RS08550	0.14	-0.7
1,820,903	+		ABCV34_RS08550	0.14	-2.3
1,820,903	+		ABCV34_RS08550	0.14	-1.6
1,820,904	-		ABCV34_RS08550	0.14	-2.2
1,820,904	-		ABCV34_RS08550	0.14	-1.6
1,820,904	-		ABCV34_RS08550	0.14	-1.7
1,820,904	-		ABCV34_RS08550	0.14	-2.9
1,820,904	-		ABCV34_RS08550	0.14	-4.0
1,820,904	-		ABCV34_RS08550	0.14	-1.6
1,820,904	-		ABCV34_RS08550	0.14	-2.0
1,820,904	-		ABCV34_RS08550	0.14	-3.1
1,820,904	-		ABCV34_RS08550	0.14	-2.7
1,820,904	-		ABCV34_RS08550	0.14	-1.6
1,820,904	-		ABCV34_RS08550	0.14	-0.6
1,820,904	-		ABCV34_RS08550	0.14	-2.1
1,820,909	+		ABCV34_RS08550	0.15	-1.6
1,820,909	+		ABCV34_RS08550	0.15	-1.2
1,820,909	+		ABCV34_RS08550	0.15	-2.4
1,820,909	+		ABCV34_RS08550	0.15	-3.0
1,820,909	+		ABCV34_RS08550	0.15	-1.9
1,820,909	+		ABCV34_RS08550	0.15	-2.3
1,820,909	+		ABCV34_RS08550	0.15	-1.6
1,820,909	+		ABCV34_RS08550	0.15	-2.6
1,820,909	+		ABCV34_RS08550	0.15	-2.0
1,820,909	+		ABCV34_RS08550	0.15	-1.9
1,820,909	+		ABCV34_RS08550	0.15	-3.1
1,820,909	+		ABCV34_RS08550	0.15	-1.7
1,820,909	+		ABCV34_RS08550	0.15	-1.6
1,820,909	+		ABCV34_RS08550	0.15	-1.7
1,820,909	+		ABCV34_RS08550	0.15	-1.4
1,820,909	+		ABCV34_RS08550	0.15	-1.8
1,820,909	+		ABCV34_RS08550	0.15	-1.8
1,820,910	-		ABCV34_RS08550	0.15	-1.4
1,820,910	-		ABCV34_RS08550	0.15	-1.2
1,820,910	-		ABCV34_RS08550	0.15	-2.7
1,820,910	-		ABCV34_RS08550	0.15	-2.3
1,820,910	-		ABCV34_RS08550	0.15	-1.4
1,820,910	-		ABCV34_RS08550	0.15	-1.1
1,821,164	+		ABCV34_RS08550	0.70	-2.1
1,821,165	-		ABCV34_RS08550	0.70	-2.3
1,821,165	-		ABCV34_RS08550	0.70	-0.8
1,821,165	-		ABCV34_RS08550	0.70	-3.2
1,821,239	+		ABCV34_RS08550	0.86	-0.1
1,821,239	+		ABCV34_RS08550	0.86	-1.2
1,821,239	+		ABCV34_RS08550	0.86	-1.3
1,821,239	+		ABCV34_RS08550	0.86	-1.1
1,821,239	+		ABCV34_RS08550	0.86	-1.6
1,821,240	-		ABCV34_RS08550	0.86	-2.2
1,821,240	-		ABCV34_RS08550	0.86	-2.4
1,821,240	-		ABCV34_RS08550	0.86	-1.6
1,821,240	-		ABCV34_RS08550	0.86	-2.1
1,821,240	-		ABCV34_RS08550	0.86	-2.5
1,821,240	-		ABCV34_RS08550	0.86	-2.3
1,821,240	-		ABCV34_RS08550	0.86	-2.9
1,821,240	-		ABCV34_RS08550	0.86	-2.0
1,821,240	-		ABCV34_RS08550	0.86	-2.4