Experiment: Outgrowth from agar plate co-culture with Inquilinus sp. 005-A5
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_04640 and MPMX20_04641 overlap by 1 nucleotides MPMX20_04641 and MPMX20_04642 are separated by 47 nucleotides MPMX20_04642 and MPMX20_04643 are separated by 14 nucleotides MPMX20_04643 and MPMX20_04644 are separated by 84 nucleotides
MPMX20_04640: MPMX20_04640 - Phosphate transport system permease protein PstC, at 4,860,963 to 4,861,922
_04640
MPMX20_04641: MPMX20_04641 - Phosphate transport system permease protein PstA, at 4,861,922 to 4,862,812
_04641
MPMX20_04642: MPMX20_04642 - Phosphate import ATP-binding protein PstB, at 4,862,860 to 4,863,633
_04642
MPMX20_04643: MPMX20_04643 - Phosphate-specific transport system accessory protein PhoU, at 4,863,648 to 4,864,373
_04643
MPMX20_04644: MPMX20_04644 - 6-phosphogluconate phosphatase, at 4,864,458 to 4,865,123
_04644
Position (kb)
4862
4863
4864 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 4861.880 kb on + strand at 4861.950 kb on - strand at 4862.009 kb on + strand at 4862.020 kb on + strand, within MPMX20_04641 at 4862.047 kb on + strand, within MPMX20_04641 at 4862.047 kb on + strand, within MPMX20_04641 at 4862.047 kb on + strand, within MPMX20_04641 at 4862.055 kb on - strand, within MPMX20_04641 at 4862.055 kb on - strand, within MPMX20_04641 at 4862.263 kb on + strand, within MPMX20_04641 at 4862.435 kb on + strand, within MPMX20_04641 at 4862.435 kb on + strand, within MPMX20_04641 at 4862.629 kb on + strand, within MPMX20_04641 at 4862.637 kb on - strand, within MPMX20_04641 at 4862.727 kb on + strand at 4862.735 kb on + strand at 4862.742 kb on + strand at 4862.742 kb on + strand at 4862.742 kb on + strand at 4862.742 kb on + strand at 4862.742 kb on + strand at 4862.805 kb on - strand at 4863.047 kb on + strand, within MPMX20_04642 at 4863.047 kb on + strand, within MPMX20_04642 at 4863.055 kb on - strand, within MPMX20_04642 at 4863.055 kb on - strand, within MPMX20_04642 at 4863.055 kb on - strand, within MPMX20_04642 at 4863.055 kb on - strand, within MPMX20_04642 at 4863.264 kb on - strand, within MPMX20_04642 at 4863.414 kb on - strand, within MPMX20_04642 at 4863.686 kb on + strand at 4863.686 kb on + strand at 4863.686 kb on + strand at 4863.686 kb on + strand at 4864.529 kb on - strand, within MPMX20_04644
Per-strain Table
Position Strand Gene LocusTag Fraction Outgrowth from agar plate co-culture with Inquilinus sp. 005-A5 remove 4,861,880 + -0.2 4,861,950 - -0.4 4,862,009 + -1.1 4,862,020 + MPMX20_04641 0.11 -0.5 4,862,047 + MPMX20_04641 0.14 -1.1 4,862,047 + MPMX20_04641 0.14 -0.1 4,862,047 + MPMX20_04641 0.14 +0.9 4,862,055 - MPMX20_04641 0.15 -0.9 4,862,055 - MPMX20_04641 0.15 +1.9 4,862,263 + MPMX20_04641 0.38 -2.0 4,862,435 + MPMX20_04641 0.58 -1.9 4,862,435 + MPMX20_04641 0.58 -0.7 4,862,629 + MPMX20_04641 0.79 -1.1 4,862,637 - MPMX20_04641 0.80 +0.9 4,862,727 + +0.5 4,862,735 + +0.3 4,862,742 + -1.1 4,862,742 + -0.8 4,862,742 + -1.1 4,862,742 + -0.2 4,862,742 + +0.3 4,862,805 - +0.2 4,863,047 + MPMX20_04642 0.24 +0.9 4,863,047 + MPMX20_04642 0.24 +0.7 4,863,055 - MPMX20_04642 0.25 -1.4 4,863,055 - MPMX20_04642 0.25 -1.7 4,863,055 - MPMX20_04642 0.25 -0.9 4,863,055 - MPMX20_04642 0.25 -1.1 4,863,264 - MPMX20_04642 0.52 +1.3 4,863,414 - MPMX20_04642 0.72 -0.7 4,863,686 + +1.9 4,863,686 + -1.1 4,863,686 + -0.7 4,863,686 + -0.5 4,864,529 - MPMX20_04644 0.11 -2.5
Or see this region's nucleotide sequence