Strain Fitness in Enterobacter sp. TBS_079 around MPMX20_04427

Experiment: Outgrowth from agar plate co-culture with Inquilinus sp. 005-A5

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX20_04426 and MPMX20_04427 are separated by 137 nucleotidesMPMX20_04427 and MPMX20_04428 are separated by 67 nucleotides MPMX20_04426: MPMX20_04426 - UDP-N-acetylenolpyruvoylglucosamine reductase, at 4,627,212 to 4,628,240 _04426 MPMX20_04427: MPMX20_04427 - 5S ribosomal RNA, at 4,628,378 to 4,628,488 _04427 MPMX20_04428: MPMX20_04428 - 23S ribosomal RNA, at 4,628,556 to 4,631,458 _04428 Position (kb) 4628 4629Strain fitness (log2 ratio) -1 0 1at 4628.311 kb on - strandat 4628.338 kb on + strandat 4628.403 kb on - strand, within MPMX20_04427

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Per-strain Table

Position Strand Gene LocusTag Fraction Outgrowth from agar plate co-culture with Inquilinus sp. 005-A5
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4,628,311 - +0.0
4,628,338 + -1.1
4,628,403 - MPMX20_04427 0.23 -0.9

Or see this region's nucleotide sequence