Experiment: Outgrowth from agar plate co-culture with Inquilinus sp. 005-A5
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_03432 and MPMX20_03433 are separated by 56 nucleotides MPMX20_03433 and MPMX20_03434 overlap by 4 nucleotides MPMX20_03434 and MPMX20_03435 overlap by 1 nucleotides
MPMX20_03432: MPMX20_03432 - HTH-type transcriptional regulator MurR, at 3,621,176 to 3,622,024
_03432
MPMX20_03433: MPMX20_03433 - Ferredoxin YfhL, at 3,622,081 to 3,622,341
_03433
MPMX20_03434: MPMX20_03434 - Holo-[acyl-carrier-protein] synthase, at 3,622,338 to 3,622,718
_03434
MPMX20_03435: MPMX20_03435 - Pyridoxine 5'-phosphate synthase, at 3,622,718 to 3,623,449
_03435
Position (kb)
3622
3623 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 3621.173 kb on + strand at 3621.173 kb on + strand at 3621.173 kb on + strand at 3621.173 kb on + strand at 3621.173 kb on + strand at 3621.173 kb on + strand at 3621.181 kb on - strand at 3621.309 kb on + strand, within MPMX20_03432 at 3621.400 kb on + strand, within MPMX20_03432 at 3621.400 kb on - strand, within MPMX20_03432 at 3621.513 kb on + strand, within MPMX20_03432 at 3621.513 kb on + strand, within MPMX20_03432 at 3621.521 kb on - strand, within MPMX20_03432 at 3621.591 kb on + strand, within MPMX20_03432 at 3621.591 kb on + strand, within MPMX20_03432 at 3621.591 kb on + strand, within MPMX20_03432 at 3621.591 kb on + strand, within MPMX20_03432 at 3621.591 kb on + strand, within MPMX20_03432 at 3621.591 kb on + strand, within MPMX20_03432 at 3621.591 kb on + strand, within MPMX20_03432 at 3621.591 kb on + strand, within MPMX20_03432 at 3621.591 kb on + strand, within MPMX20_03432 at 3621.599 kb on - strand, within MPMX20_03432 at 3621.599 kb on - strand, within MPMX20_03432 at 3621.599 kb on - strand, within MPMX20_03432 at 3621.599 kb on - strand, within MPMX20_03432 at 3621.599 kb on - strand, within MPMX20_03432 at 3621.599 kb on - strand, within MPMX20_03432 at 3621.599 kb on - strand, within MPMX20_03432 at 3621.599 kb on - strand, within MPMX20_03432 at 3621.599 kb on - strand, within MPMX20_03432 at 3621.683 kb on - strand, within MPMX20_03432 at 3621.685 kb on + strand, within MPMX20_03432 at 3621.685 kb on + strand, within MPMX20_03432 at 3621.685 kb on + strand, within MPMX20_03432 at 3621.733 kb on + strand, within MPMX20_03432 at 3621.855 kb on + strand, within MPMX20_03432 at 3621.864 kb on - strand, within MPMX20_03432 at 3621.948 kb on + strand at 3621.948 kb on - strand at 3621.983 kb on - strand at 3621.996 kb on + strand at 3622.004 kb on - strand at 3622.004 kb on - strand at 3622.004 kb on - strand at 3622.018 kb on + strand at 3622.193 kb on + strand, within MPMX20_03433 at 3622.208 kb on + strand, within MPMX20_03433 at 3622.248 kb on + strand, within MPMX20_03433 at 3622.286 kb on - strand, within MPMX20_03433 at 3622.286 kb on - strand, within MPMX20_03433 at 3622.307 kb on + strand, within MPMX20_03433 at 3623.030 kb on - strand, within MPMX20_03435 at 3623.030 kb on - strand, within MPMX20_03435 at 3623.030 kb on - strand, within MPMX20_03435 at 3623.030 kb on - strand, within MPMX20_03435
Per-strain Table
Position Strand Gene LocusTag Fraction Outgrowth from agar plate co-culture with Inquilinus sp. 005-A5 remove 3,621,173 + +0.2 3,621,173 + +0.4 3,621,173 + +0.4 3,621,173 + -1.7 3,621,173 + -2.1 3,621,173 + +0.6 3,621,181 - +0.4 3,621,309 + MPMX20_03432 0.16 +0.5 3,621,400 + MPMX20_03432 0.26 -1.1 3,621,400 - MPMX20_03432 0.26 -0.4 3,621,513 + MPMX20_03432 0.40 -0.7 3,621,513 + MPMX20_03432 0.40 -1.6 3,621,521 - MPMX20_03432 0.41 -0.1 3,621,591 + MPMX20_03432 0.49 +0.7 3,621,591 + MPMX20_03432 0.49 +0.7 3,621,591 + MPMX20_03432 0.49 -0.2 3,621,591 + MPMX20_03432 0.49 +0.2 3,621,591 + MPMX20_03432 0.49 -1.7 3,621,591 + MPMX20_03432 0.49 +2.0 3,621,591 + MPMX20_03432 0.49 -0.0 3,621,591 + MPMX20_03432 0.49 -2.1 3,621,591 + MPMX20_03432 0.49 -0.7 3,621,599 - MPMX20_03432 0.50 -0.6 3,621,599 - MPMX20_03432 0.50 +0.0 3,621,599 - MPMX20_03432 0.50 +0.4 3,621,599 - MPMX20_03432 0.50 +0.3 3,621,599 - MPMX20_03432 0.50 -0.5 3,621,599 - MPMX20_03432 0.50 +0.0 3,621,599 - MPMX20_03432 0.50 -1.0 3,621,599 - MPMX20_03432 0.50 +0.5 3,621,599 - MPMX20_03432 0.50 +0.4 3,621,683 - MPMX20_03432 0.60 +0.3 3,621,685 + MPMX20_03432 0.60 +2.0 3,621,685 + MPMX20_03432 0.60 +0.6 3,621,685 + MPMX20_03432 0.60 -0.6 3,621,733 + MPMX20_03432 0.66 -1.3 3,621,855 + MPMX20_03432 0.80 -0.4 3,621,864 - MPMX20_03432 0.81 -2.0 3,621,948 + +0.3 3,621,948 - +1.4 3,621,983 - -1.6 3,621,996 + -0.7 3,622,004 - -0.4 3,622,004 - +0.9 3,622,004 - -0.3 3,622,018 + -1.7 3,622,193 + MPMX20_03433 0.43 -0.7 3,622,208 + MPMX20_03433 0.49 -0.9 3,622,248 + MPMX20_03433 0.64 -1.4 3,622,286 - MPMX20_03433 0.79 -2.4 3,622,286 - MPMX20_03433 0.79 -0.4 3,622,307 + MPMX20_03433 0.87 -0.7 3,623,030 - MPMX20_03435 0.43 -0.7 3,623,030 - MPMX20_03435 0.43 -1.0 3,623,030 - MPMX20_03435 0.43 -0.0 3,623,030 - MPMX20_03435 0.43 -1.2
Or see this region's nucleotide sequence