Experiment: Outgrowth from agar plate co-culture with Inquilinus sp. 005-A5
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX20_03021 and MPMX20_03022 are separated by 3 nucleotides MPMX20_03022 and MPMX20_03023 overlap by 4 nucleotides
MPMX20_03021: MPMX20_03021 - hypothetical protein, at 3,155,613 to 3,156,698
_03021
MPMX20_03022: MPMX20_03022 - D-inositol-3-phosphate glycosyltransferase, at 3,156,702 to 3,157,823
_03022
MPMX20_03023: MPMX20_03023 - lipid II flippase MurJ, at 3,157,820 to 3,159,058
_03023
Position (kb)
3156
3157
3158 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 3155.911 kb on - strand, within MPMX20_03021 at 3155.970 kb on - strand, within MPMX20_03021 at 3156.050 kb on - strand, within MPMX20_03021 at 3156.081 kb on - strand, within MPMX20_03021 at 3156.087 kb on - strand, within MPMX20_03021 at 3156.094 kb on - strand, within MPMX20_03021 at 3156.118 kb on - strand, within MPMX20_03021 at 3156.118 kb on - strand, within MPMX20_03021 at 3156.162 kb on - strand, within MPMX20_03021 at 3156.237 kb on - strand, within MPMX20_03021 at 3156.237 kb on - strand, within MPMX20_03021 at 3156.237 kb on - strand, within MPMX20_03021 at 3156.237 kb on - strand, within MPMX20_03021 at 3156.252 kb on - strand, within MPMX20_03021 at 3156.252 kb on - strand, within MPMX20_03021 at 3156.252 kb on - strand, within MPMX20_03021 at 3156.252 kb on - strand, within MPMX20_03021 at 3156.252 kb on - strand, within MPMX20_03021 at 3156.252 kb on - strand, within MPMX20_03021 at 3156.252 kb on - strand, within MPMX20_03021 at 3156.252 kb on - strand, within MPMX20_03021 at 3156.252 kb on - strand, within MPMX20_03021 at 3156.252 kb on - strand, within MPMX20_03021 at 3156.252 kb on - strand, within MPMX20_03021 at 3156.252 kb on - strand, within MPMX20_03021 at 3156.252 kb on - strand, within MPMX20_03021 at 3156.252 kb on - strand, within MPMX20_03021 at 3156.252 kb on - strand, within MPMX20_03021 at 3156.252 kb on - strand, within MPMX20_03021 at 3156.252 kb on - strand, within MPMX20_03021 at 3156.252 kb on - strand, within MPMX20_03021 at 3156.252 kb on - strand, within MPMX20_03021 at 3156.252 kb on - strand, within MPMX20_03021 at 3156.252 kb on - strand, within MPMX20_03021 at 3156.252 kb on - strand, within MPMX20_03021 at 3156.252 kb on - strand, within MPMX20_03021 at 3156.252 kb on - strand, within MPMX20_03021 at 3156.252 kb on - strand, within MPMX20_03021 at 3156.252 kb on - strand, within MPMX20_03021 at 3156.263 kb on - strand, within MPMX20_03021 at 3156.264 kb on - strand, within MPMX20_03021 at 3156.264 kb on - strand, within MPMX20_03021 at 3156.273 kb on - strand, within MPMX20_03021 at 3156.274 kb on - strand, within MPMX20_03021 at 3156.275 kb on - strand, within MPMX20_03021 at 3156.286 kb on - strand, within MPMX20_03021 at 3156.286 kb on - strand, within MPMX20_03021 at 3156.314 kb on - strand, within MPMX20_03021 at 3156.321 kb on - strand, within MPMX20_03021 at 3156.321 kb on - strand, within MPMX20_03021 at 3156.322 kb on - strand, within MPMX20_03021 at 3156.329 kb on - strand, within MPMX20_03021 at 3156.332 kb on - strand, within MPMX20_03021 at 3156.332 kb on - strand, within MPMX20_03021 at 3156.333 kb on - strand, within MPMX20_03021 at 3156.348 kb on - strand, within MPMX20_03021 at 3156.349 kb on - strand, within MPMX20_03021 at 3156.516 kb on - strand, within MPMX20_03021 at 3156.547 kb on - strand, within MPMX20_03021 at 3156.581 kb on - strand, within MPMX20_03021 at 3156.635 kb on - strand at 3156.651 kb on - strand at 3156.651 kb on - strand at 3156.743 kb on - strand at 3156.751 kb on - strand at 3156.871 kb on - strand, within MPMX20_03022 at 3156.871 kb on - strand, within MPMX20_03022 at 3156.965 kb on - strand, within MPMX20_03022 at 3156.977 kb on - strand, within MPMX20_03022 at 3157.038 kb on - strand, within MPMX20_03022 at 3157.044 kb on - strand, within MPMX20_03022 at 3157.136 kb on - strand, within MPMX20_03022 at 3157.146 kb on - strand, within MPMX20_03022 at 3157.146 kb on - strand, within MPMX20_03022 at 3157.146 kb on - strand, within MPMX20_03022 at 3157.146 kb on - strand, within MPMX20_03022 at 3157.146 kb on - strand, within MPMX20_03022 at 3157.146 kb on - strand, within MPMX20_03022 at 3157.303 kb on - strand, within MPMX20_03022 at 3157.310 kb on - strand, within MPMX20_03022 at 3157.320 kb on - strand, within MPMX20_03022 at 3157.332 kb on - strand, within MPMX20_03022 at 3157.332 kb on - strand, within MPMX20_03022 at 3157.430 kb on - strand, within MPMX20_03022 at 3157.454 kb on - strand, within MPMX20_03022 at 3157.517 kb on - strand, within MPMX20_03022 at 3157.536 kb on - strand, within MPMX20_03022 at 3157.628 kb on - strand, within MPMX20_03022 at 3157.640 kb on - strand, within MPMX20_03022 at 3157.659 kb on - strand, within MPMX20_03022 at 3157.659 kb on - strand, within MPMX20_03022 at 3157.659 kb on - strand, within MPMX20_03022 at 3157.685 kb on - strand, within MPMX20_03022 at 3157.685 kb on - strand, within MPMX20_03022 at 3157.709 kb on - strand, within MPMX20_03022 at 3157.788 kb on - strand at 3157.788 kb on - strand at 3157.805 kb on - strand at 3157.835 kb on - strand at 3157.835 kb on - strand at 3157.881 kb on - strand at 3157.921 kb on - strand at 3157.921 kb on - strand at 3157.922 kb on - strand at 3158.356 kb on - strand, within MPMX20_03023 at 3158.524 kb on - strand, within MPMX20_03023 at 3158.524 kb on - strand, within MPMX20_03023
Per-strain Table
Position Strand Gene LocusTag Fraction Outgrowth from agar plate co-culture with Inquilinus sp. 005-A5 remove 3,155,911 - MPMX20_03021 0.27 -1.6 3,155,970 - MPMX20_03021 0.33 -0.8 3,156,050 - MPMX20_03021 0.40 -1.0 3,156,081 - MPMX20_03021 0.43 -1.0 3,156,087 - MPMX20_03021 0.44 -1.5 3,156,094 - MPMX20_03021 0.44 +0.4 3,156,118 - MPMX20_03021 0.47 -1.0 3,156,118 - MPMX20_03021 0.47 +2.0 3,156,162 - MPMX20_03021 0.51 +0.7 3,156,237 - MPMX20_03021 0.57 +0.4 3,156,237 - MPMX20_03021 0.57 +1.0 3,156,237 - MPMX20_03021 0.57 +1.1 3,156,237 - MPMX20_03021 0.57 -3.0 3,156,252 - MPMX20_03021 0.59 -2.9 3,156,252 - MPMX20_03021 0.59 -2.0 3,156,252 - MPMX20_03021 0.59 -1.3 3,156,252 - MPMX20_03021 0.59 -1.0 3,156,252 - MPMX20_03021 0.59 -0.6 3,156,252 - MPMX20_03021 0.59 -0.5 3,156,252 - MPMX20_03021 0.59 -1.7 3,156,252 - MPMX20_03021 0.59 +0.4 3,156,252 - MPMX20_03021 0.59 -2.5 3,156,252 - MPMX20_03021 0.59 -2.4 3,156,252 - MPMX20_03021 0.59 -1.9 3,156,252 - MPMX20_03021 0.59 -1.9 3,156,252 - MPMX20_03021 0.59 -2.3 3,156,252 - MPMX20_03021 0.59 +0.2 3,156,252 - MPMX20_03021 0.59 -0.3 3,156,252 - MPMX20_03021 0.59 -1.9 3,156,252 - MPMX20_03021 0.59 -1.6 3,156,252 - MPMX20_03021 0.59 -1.8 3,156,252 - MPMX20_03021 0.59 +0.4 3,156,252 - MPMX20_03021 0.59 -1.2 3,156,252 - MPMX20_03021 0.59 -0.8 3,156,252 - MPMX20_03021 0.59 -0.3 3,156,252 - MPMX20_03021 0.59 -2.1 3,156,252 - MPMX20_03021 0.59 -1.0 3,156,252 - MPMX20_03021 0.59 +0.3 3,156,252 - MPMX20_03021 0.59 -0.0 3,156,263 - MPMX20_03021 0.60 +0.4 3,156,264 - MPMX20_03021 0.60 -0.3 3,156,264 - MPMX20_03021 0.60 -2.0 3,156,273 - MPMX20_03021 0.61 -0.3 3,156,274 - MPMX20_03021 0.61 -1.3 3,156,275 - MPMX20_03021 0.61 -1.0 3,156,286 - MPMX20_03021 0.62 -2.4 3,156,286 - MPMX20_03021 0.62 -2.6 3,156,314 - MPMX20_03021 0.65 -1.9 3,156,321 - MPMX20_03021 0.65 -0.8 3,156,321 - MPMX20_03021 0.65 -3.3 3,156,322 - MPMX20_03021 0.65 -0.6 3,156,329 - MPMX20_03021 0.66 -1.5 3,156,332 - MPMX20_03021 0.66 -2.0 3,156,332 - MPMX20_03021 0.66 +0.4 3,156,333 - MPMX20_03021 0.66 -2.9 3,156,348 - MPMX20_03021 0.68 -1.5 3,156,349 - MPMX20_03021 0.68 -1.5 3,156,516 - MPMX20_03021 0.83 -0.6 3,156,547 - MPMX20_03021 0.86 -1.6 3,156,581 - MPMX20_03021 0.89 -1.3 3,156,635 - +0.2 3,156,651 - -1.8 3,156,651 - -2.3 3,156,743 - -0.0 3,156,751 - -0.6 3,156,871 - MPMX20_03022 0.15 -1.3 3,156,871 - MPMX20_03022 0.15 +0.7 3,156,965 - MPMX20_03022 0.23 +1.0 3,156,977 - MPMX20_03022 0.25 -0.3 3,157,038 - MPMX20_03022 0.30 -0.3 3,157,044 - MPMX20_03022 0.30 -0.0 3,157,136 - MPMX20_03022 0.39 +1.0 3,157,146 - MPMX20_03022 0.40 -0.0 3,157,146 - MPMX20_03022 0.40 +2.0 3,157,146 - MPMX20_03022 0.40 +1.0 3,157,146 - MPMX20_03022 0.40 -0.6 3,157,146 - MPMX20_03022 0.40 -1.2 3,157,146 - MPMX20_03022 0.40 +2.0 3,157,303 - MPMX20_03022 0.54 -0.3 3,157,310 - MPMX20_03022 0.54 -1.0 3,157,320 - MPMX20_03022 0.55 +1.0 3,157,332 - MPMX20_03022 0.56 -1.3 3,157,332 - MPMX20_03022 0.56 -0.6 3,157,430 - MPMX20_03022 0.65 -2.7 3,157,454 - MPMX20_03022 0.67 +1.0 3,157,517 - MPMX20_03022 0.73 +0.4 3,157,536 - MPMX20_03022 0.74 +1.0 3,157,628 - MPMX20_03022 0.83 +1.0 3,157,640 - MPMX20_03022 0.84 -1.3 3,157,659 - MPMX20_03022 0.85 +2.0 3,157,659 - MPMX20_03022 0.85 +2.0 3,157,659 - MPMX20_03022 0.85 -1.2 3,157,685 - MPMX20_03022 0.88 +2.0 3,157,685 - MPMX20_03022 0.88 +1.0 3,157,709 - MPMX20_03022 0.90 -1.6 3,157,788 - +1.0 3,157,788 - +1.0 3,157,805 - -0.0 3,157,835 - +2.0 3,157,835 - -1.7 3,157,881 - -1.0 3,157,921 - +1.0 3,157,921 - -0.0 3,157,922 - -2.8 3,158,356 - MPMX20_03023 0.43 +0.4 3,158,524 - MPMX20_03023 0.57 +1.0 3,158,524 - MPMX20_03023 0.57 -0.8
Or see this region's nucleotide sequence